Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034553_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:1:296072249:296077296:-1 gene:Zm00001d034553 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cellulose synthase5 description:Cellulose synthase-5

Sequence

ATGCTCACCTGGCGGACAAACTCACGTGGCAGTGATATTGGCCTGGCTAAGTATGACAGC
GGTGAAATTGGGCATGGGAAGTATGACAGTGGTGAGATCCCTCGTGGATATATCCCGTCA
CTAACTCATAGCCAGATCTCAGGAGAGATTCCTGGAGCTTCCCCTGATCATATGATGTCT
CCTGTTGGGAACATTGGCAGGCGTGGACATCAATTTCCTTATGTAAATCATTCTCCAAAC
CCATCGAGGGAGTTCTCCGGTAGCCTTGGCAATGTTGCATGGAAAGAGAGGGTGGATGGA
TGGAAAATGAAGGATAAAGGTGCAATTCCTATGACCAATGGAACAAGCATTGCTCCATCA
GAAGGGCGTGGAGTTGCTGATATTGATGCTTCTACTGATTATAACATGGAAGATGCCTTA
CTGAATGATGAAACTCGGCAACCTCTATCTAGAAAAGTGCCAATTCCTTCATCCAGAATA
AATCCGTACAGAATGGTCATTGTGCTACGTTTGGCTGTTCTATGCATATTCTTGCGCTAC
CGTATCACACATCCTGTGAACAATGCATATCCACTGTGGCTTTTATCCGTCATATGTGAG
ATCTGGTTTGCTTTGTCCTGGATTTTGGATCAGTTCCCAAAGTGGTCCCCAATCAACCGT
GAAACATACCTTGATAGACTGGCTTTAAGGTATGACCGAGAAGGTGAACCATCTCAATTA
GCTCCTGTTGATATCTTTGTCAGTACTGTGGATCCTATGAAGGAGCCTCCTCTTGTCACT
GCAAATACTGTGCTTTCCATCCTTGCTGTCGATTATCCGGTTGACAAGGTATCTTGCTAT
GTTTCGGATGATGGAGCTGCTATGCTGACTTTTGATGCTCTCTCTGAAACTTCAGAGTTT
GCTAGAAAATGGGTTCCGTTCTGTAAGAAGTACAACATAGAGCCTAGGGCTCCGGAATGG
TACTTTGCTCAGAAAATTGATTACTTGAAAGACAAAGTTCAAACTTCATTTGTGAAAGAA
CGCCGGGCCATGAAGAGAGAATATGAAGAATTCAAAGTTCGTATCAATGGTCTTGTAGCC
AATGCACAAAAAGTTCCCGAGGAGGGATGGATCATGCAAGATGGTACACCTTGGCCTGGG
AACAATACTAGGGACCATCCTGGAATGATTCAGGTTTTCCTGGGTCACAGTGGAGGGCTT
GACGTTGAAGGCAATGAACTTCCTCGTTTGGTTTATGTGTCTCGTGAAAAACGTCCTGGA
TTCCAACATCACAAGAAGGCTGGTGCCATGAATGTTCGTGTATCAGCTGTCCTTACTAAT
GGGCAATACATGTTGAATCTTGACTGTGACCACTACATCAATAATAGCAAGGCTCTTCGA
GAAGCTATGTGCTTCCTTATGGACCCAAACCTAGGAAGGAATGTCTGTTATGTCCAATTT
CCTCAGAGGTTTGATGGTATTGATAGGAATGACCGATATGCAAACAGGAACACTGTGTTT
TTCGATATTAACTTGAGAGGTCTTGACGGCATTCAAGGGCCAGTTTATGTGGGAACTGGT
TGTGTGTTTAACAGAACGGCCTTATATGGTTATGAGCCTCCAGTCAAGAAAAAAAAGCCA
GGCTTCTTCTCTTCGCTTTGTGGGGGAAGGAAAAAGACGTCAAAATCTAAGAAGAGCTCG
GAAAAGAAGAAGTCACATAGACACGCAGACAGTTCTGTACCAGTATTTAATCTCGAAGAT
ATAGAGGAAGGGATTGAAGGTTCTCAGTTTGATGATGAGAAATCGCTGATTATGTCTCAA
ATGAGCTTGGAGAAGAGATTTGGCCAGTCCAGTGTTTTTGTAGCCTCTACTCTGATGGAA
TATGGCGGTGTTCCACAATCTGCAACTCCAGAGTCTCTTCTGAAAGAAGCTATTCATGTC
ATCAGCTGTGGCTATGAGGACAAAACTGACTGGGGAACTGAGATTGGGTGGATCTATGGT
TCTGTTACAGAAGACATTCTCACCGGATTCAAGATGCATGCTCGAGGCTGGCGATCAATC
TACTGCATGCCTAAGCGACCAGCTTTCAAGGGATCTGCTCCTATCAACCTTTCGGATCGT
TTGAATCAAGTGCTTCGGTGGGCTCTTGGTTCCATTGAAATTCTTTTCAGCAGGCATTGT
CCCATATGGTATGGCTATGGAGGTCGGCTTAAATTCCTGGAGAGATTTGCTTATATCAAC
ACAACAATTTATCCACTCACATCAATCCCGCTCCTCCTGTACTGCATATTGCCAGCAGTT
TGTCTTCTCACTGGGAAGTTCATCATCCCAAAGATTAGTAACCTAGAGAGTGTTTGGTTT
ATATCGCTCTTTATCTCAATCTTTGCCACTGGTATCCTTGAGATGAGGTGGAGTGGTGTT
GGCATTGATGAATGGTGGAGGAACGAGCAGTTCTGGGTCATTGGTGGTATTTCTGCGCAT
TTATTTGCCGTCTTCCAGGGTCTCCTGAAGGTGCTTGCTGGTATCGACACGAGCTTCACT
GTCACCTCTAAGGCCACTGACGAAGAAGGTGATTTTGCCGAGCTCTACATGTTCAAGTGG
ACAACGCTTCTGATCCCACCAACCACTATTTTGATCATCAACCTGGTCGGCGTGGTCGCT
GGCATTTCCTACGCAATCAATAGCGGTTACCAGTCATGGGGACCTCTTTTCGGGAAGCTC
TTCTTTGCGTTCTGGGTGATTGTCCACCTGTACCCCTTCCTCAAGGGCCTCATGGGGAAG
CAGAACCGCACGCCGACCATTGTCGTTGTCTGGGCTATCCTCCTTGCGTCGATCTTTTCC
CTGATGTGGGTTCGTATCGATCCATTCACCACCCGGGTCACTGGTCCTGATATCGCGAAA
TGTGGCATCAACTGCTAG

Peptide Sequence

PEP ID

Zm00001d034553_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:1:296072249:296077296:-1 gene:Zm00001d034553 transcript:Zm00001d034553_T012 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cellulose synthase5 description:Cellulose synthase-5

Sequence

MLTWRTNSRGSDIGLAKYDSGEIGHGKYDSGEIPRGYIPSLTHSQISGEIPGASPDHMMS
PVGNIGRRGHQFPYVNHSPNPSREFSGSLGNVAWKERVDGWKMKDKGAIPMTNGTSIAPS
EGRGVADIDASTDYNMEDALLNDETRQPLSRKVPIPSSRINPYRMVIVLRLAVLCIFLRY
RITHPVNNAYPLWLLSVICEIWFALSWILDQFPKWSPINRETYLDRLALRYDREGEPSQL
APVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALSETSEF
ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQTSFVKERRAMKREYEEFKVRINGLVA
NAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDVEGNELPRLVYVSREKRPG
FQHHKKAGAMNVRVSAVLTNGQYMLNLDCDHYINNSKALREAMCFLMDPNLGRNVCYVQF
PQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPVKKKKP
GFFSSLCGGRKKTSKSKKSSEKKKSHRHADSSVPVFNLEDIEEGIEGSQFDDEKSLIMSQ
MSLEKRFGQSSVFVASTLMEYGGVPQSATPESLLKEAIHVISCGYEDKTDWGTEIGWIYG
SVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSIEILFSRHC
PIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAVCLLTGKFIIPKISNLESVWF
ISLFISIFATGILEMRWSGVGIDEWWRNEQFWVIGGISAHLFAVFQGLLKVLAGIDTSFT
VTSKATDEEGDFAELYMFKWTTLLIPPTTILIINLVGVVAGISYAINSGYQSWGPLFGKL
FFAFWVIVHLYPFLKGLMGKQNRTPTIVVVWAILLASIFSLMWVRIDPFTTRVTGPDIAK
CGINC

Transcript Sequence

Transcript ID

Zm00001d034553_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:296072249:296077296:-1 gene:Zm00001d034553 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cellulose synthase5 description:Cellulose synthase-5

Sequence

AGGCGTGCCCGCAGTGCAAGACTAAGTACAAGCGCCACAAAGGGAGCCCACCAGTACACG
GTGAGGAAAATGAGGATGTGGATGCTGACGATGTGAGTGACTACAACTACCAAGCATCTG
GCAACCAGGATCAGAAGCAAAAGATTGCTGAGAGAATGCTCACCTGGCGGACAAACTCAC
GTGGCAGTGATATTGGCCTGGCTAAGTATGACAGCGGTGAAATTGGGCATGGGAAGTATG
ACAGTGGTGAGATCCCTCGTGGATATATCCCGTCACTAACTCATAGCCAGATCTCAGGAG
AGATTCCTGGAGCTTCCCCTGATCATATGATGTCTCCTGTTGGGAACATTGGCAGGCGTG
GACATCAATTTCCTTATGTAAATCATTCTCCAAACCCATCGAGGGAGTTCTCCGGTAGCC
TTGGCAATGTTGCATGGAAAGAGAGGGTGGATGGATGGAAAATGAAGGATAAAGGTGCAA
TTCCTATGACCAATGGAACAAGCATTGCTCCATCAGAAGGGCGTGGAGTTGCTGATATTG
ATGCTTCTACTGATTATAACATGGAAGATGCCTTACTGAATGATGAAACTCGGCAACCTC
TATCTAGAAAAGTGCCAATTCCTTCATCCAGAATAAATCCGTACAGAATGGTCATTGTGC
TACGTTTGGCTGTTCTATGCATATTCTTGCGCTACCGTATCACACATCCTGTGAACAATG
CATATCCACTGTGGCTTTTATCCGTCATATGTGAGATCTGGTTTGCTTTGTCCTGGATTT
TGGATCAGTTCCCAAAGTGGTCCCCAATCAACCGTGAAACATACCTTGATAGACTGGCTT
TAAGGTATGACCGAGAAGGTGAACCATCTCAATTAGCTCCTGTTGATATCTTTGTCAGTA
CTGTGGATCCTATGAAGGAGCCTCCTCTTGTCACTGCAAATACTGTGCTTTCCATCCTTG
CTGTCGATTATCCGGTTGACAAGGTATCTTGCTATGTTTCGGATGATGGAGCTGCTATGC
TGACTTTTGATGCTCTCTCTGAAACTTCAGAGTTTGCTAGAAAATGGGTTCCGTTCTGTA
AGAAGTACAACATAGAGCCTAGGGCTCCGGAATGGTACTTTGCTCAGAAAATTGATTACT
TGAAAGACAAAGTTCAAACTTCATTTGTGAAAGAACGCCGGGCCATGAAGAGAGAATATG
AAGAATTCAAAGTTCGTATCAATGGTCTTGTAGCCAATGCACAAAAAGTTCCCGAGGAGG
GATGGATCATGCAAGATGGTACACCTTGGCCTGGGAACAATACTAGGGACCATCCTGGAA
TGATTCAGGTTTTCCTGGGTCACAGTGGAGGGCTTGACGTTGAAGGCAATGAACTTCCTC
GTTTGGTTTATGTGTCTCGTGAAAAACGTCCTGGATTCCAACATCACAAGAAGGCTGGTG
CCATGAATGTTCGTGTATCAGCTGTCCTTACTAATGGGCAATACATGTTGAATCTTGACT
GTGACCACTACATCAATAATAGCAAGGCTCTTCGAGAAGCTATGTGCTTCCTTATGGACC
CAAACCTAGGAAGGAATGTCTGTTATGTCCAATTTCCTCAGAGGTTTGATGGTATTGATA
GGAATGACCGATATGCAAACAGGAACACTGTGTTTTTCGATATTAACTTGAGAGGTCTTG
ACGGCATTCAAGGGCCAGTTTATGTGGGAACTGGTTGTGTGTTTAACAGAACGGCCTTAT
ATGGTTATGAGCCTCCAGTCAAGAAAAAAAAGCCAGGCTTCTTCTCTTCGCTTTGTGGGG
GAAGGAAAAAGACGTCAAAATCTAAGAAGAGCTCGGAAAAGAAGAAGTCACATAGACACG
CAGACAGTTCTGTACCAGTATTTAATCTCGAAGATATAGAGGAAGGGATTGAAGGTTCTC
AGTTTGATGATGAGAAATCGCTGATTATGTCTCAAATGAGCTTGGAGAAGAGATTTGGCC
AGTCCAGTGTTTTTGTAGCCTCTACTCTGATGGAATATGGCGGTGTTCCACAATCTGCAA
CTCCAGAGTCTCTTCTGAAAGAAGCTATTCATGTCATCAGCTGTGGCTATGAGGACAAAA
CTGACTGGGGAACTGAGATTGGGTGGATCTATGGTTCTGTTACAGAAGACATTCTCACCG
GATTCAAGATGCATGCTCGAGGCTGGCGATCAATCTACTGCATGCCTAAGCGACCAGCTT
TCAAGGGATCTGCTCCTATCAACCTTTCGGATCGTTTGAATCAAGTGCTTCGGTGGGCTC
TTGGTTCCATTGAAATTCTTTTCAGCAGGCATTGTCCCATATGGTATGGCTATGGAGGTC
GGCTTAAATTCCTGGAGAGATTTGCTTATATCAACACAACAATTTATCCACTCACATCAA
TCCCGCTCCTCCTGTACTGCATATTGCCAGCAGTTTGTCTTCTCACTGGGAAGTTCATCA
TCCCAAAGATTAGTAACCTAGAGAGTGTTTGGTTTATATCGCTCTTTATCTCAATCTTTG
CCACTGGTATCCTTGAGATGAGGTGGAGTGGTGTTGGCATTGATGAATGGTGGAGGAACG
AGCAGTTCTGGGTCATTGGTGGTATTTCTGCGCATTTATTTGCCGTCTTCCAGGGTCTCC
TGAAGGTGCTTGCTGGTATCGACACGAGCTTCACTGTCACCTCTAAGGCCACTGACGAAG
AAGGTGATTTTGCCGAGCTCTACATGTTCAAGTGGACAACGCTTCTGATCCCACCAACCA
CTATTTTGATCATCAACCTGGTCGGCGTGGTCGCTGGCATTTCCTACGCAATCAATAGCG
GTTACCAGTCATGGGGACCTCTTTTCGGGAAGCTCTTCTTTGCGTTCTGGGTGATTGTCC
ACCTGTACCCCTTCCTCAAGGGCCTCATGGGGAAGCAGAACCGCACGCCGACCATTGTCG
TTGTCTGGGCTATCCTCCTTGCGTCGATCTTTTCCCTGATGTGGGTTCGTATCGATCCAT
TCACCACCCGGGTCACTGGTCCTGATATCGCGAAATGTGGCATCAACTGCTAGGATGAGC
TGAAGATAATTAAAGAGTGGAACTAGACGCATTGTGCATCGTAAGTTATCAGTGGGTGGC
TCTTTTTATAGTATGGTAGGAACTTGGTCGGGAGACGTTAATTACATATGCTATATGTAC
CTCCGCTGGTCTTTATCCGTAAGTTAATATATATACTGCT