Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034551_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:296036999:296045917:-1 gene:Zm00001d034551 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase QRT2
Sequence	ATGAAGCTTGTGTACATGGTGACCCTCCTACCGTTGCTCTTCATGTCCGGCGTTCTTGAG GCTGCAGGAGCGGGCAATGACAGCTCGGCTGACGGCACGAACGGCAACTTGCACAGCTCT GGCACCAGCAGACCCGCCGCCGCGCCCAGGGGAAGGTCGCTGCAAGCATCGCAGAGCAGC GTGTACAGCGTCGACCGCTACGGTGCCCGTGGCGACGGGAGGAACGATGACACGCGGGCG CTGGAAATGGCGTGGAAGGCGGCGTGCGCCTCGCCACGGCCGGCCGTCGTGCTCGTCCCT GACGGCAGGCGTTACCTGCTGAAGCTCCTCACCCTCCGCGGCCCGTGCAAGTCCAGCGTC ACGCTCACGGTGAAGGGCACTCTGGTTGCATCGCCAAACCGGGCGGATTGGAGCGACAAT GACAGGAGGCACTGGATCGTGTTCCGGAGCATCGACAAGCTCACCGTCAACGGCGGTGGC GCCATCGATGGCAACGGCGAGAAATGGTGGCCTCACTCGTGCAAGATCAACAAGGCTCTC CCTTGCAAGGAGGCTCCGACGGCTCTGTCATTCCACTACTGCGTCGACCTGAAAGTGGAG GATCTGAAAATCGTGAACAGCCAACAGATACACATGTCAGTCGAGGATTCTGCAAATGCG CTGCTGGCGCGGTTGTCCATCACAGCGCCTGGCACCAGCCCTAACACTGACGGCATCCAC ATCACTCGCAGCAAAGATGTACGCGTCACAGACTGCAAGATCAAGACAGGGGACGACTGC ATGTCAATCGAGAACGGGACTCACAACCTCCATGTCTCCAAAGTTAACTGTGGTCCAGGG CATGGGATCAGCATCGGAAGCCTAGGAGACGACAACTCAAGAGCAGAAGTCTCCGGCATC ACCATAGATTCAGTGCAACTACACGGCACAACCAACGGAGCACGCATCAAGACGTACCAG GGAGGCAGCGGATACGCCAAGGACATCACGTTCCAAAATATGGTTATGTACGACGTCAAG AACCCGATAATCATCGACCAGAACTACTGCGACAAGGCTAAGCCATGCGGAGAACAAGAG TCAGCAGTGCAGGTCAGCGGTGTCGTCTTCAAGAACATTAGAGGGACGACCAGTACCAAG GACGCCATCAAGATGAACTGCAGTGAGAACGTCCCATGCCAAGGCATTACCTTGCAGAAC ATCGACCTGAAAATGCAGGACGGCAAGGGCAACACAAGAAGCACTTGTCAGAATGCAAAA TGGACAGAATTTGGGACAGTTCGCCCGCAGCCTTGCACTGCCATAAAGTAG

Peptide Sequence

PEP ID	Zm00001d034551_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:296036999:296045917:-1 gene:Zm00001d034551 transcript:Zm00001d034551_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase QRT2
Sequence	MKLVYMVTLLPLLFMSGVLEAAGAGNDSSADGTNGNLHSSGTSRPAAAPRGRSLQASQSS VYSVDRYGARGDGRNDDTRALEMAWKAACASPRPAVVLVPDGRRYLLKLLTLRGPCKSSV TLTVKGTLVASPNRADWSDNDRRHWIVFRSIDKLTVNGGGAIDGNGEKWWPHSCKINKAL PCKEAPTALSFHYCVDLKVEDLKIVNSQQIHMSVEDSANALLARLSITAPGTSPNTDGIH ITRSKDVRVTDCKIKTGDDCMSIENGTHNLHVSKVNCGPGHGISIGSLGDDNSRAEVSGI TIDSVQLHGTTNGARIKTYQGGSGYAKDITFQNMVMYDVKNPIIIDQNYCDKAKPCGEQE SAVQVSGVVFKNIRGTTSTKDAIKMNCSENVPCQGITLQNIDLKMQDGKGNTRSTCQNAK WTEFGTVRPQPCTAIK

Transcript Sequence

Transcript ID	Zm00001d034551_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:296036999:296045917:-1 gene:Zm00001d034551 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase QRT2
Sequence	CTGCCTCTCCCTCCTCCGCGCCCGGCACCGCCATGACCAAGCAGCAGCTAGGTCTGCGTG CGTGTGCAAATGGAGAGAAGGGATGCGTTGGAGAAGAAGATGGAAAGAGCATGGTCGTGC CGCCCAGTGCTTGCCGGGGCGCGCTAGCGACTTGTGCCCATGGCCTGGCCGGCGGCCGGT GTCCTCTGTTGCCAAGCGTTCTCTGTTGCCGGAGAAGAAATGTGCGTGCGTTCTGAAGGA AGAAGAAGACCCCTTTGGGTCTATGACGTGTGGGCCCAAGGCAGGGACCGAGAGATGATG ATCGAGCCAGTGATGTGGTGCCAACCACAAGATGCAGTTGGTGGACGACCTGAAGACTGA TGGACTTACCCAGTTGATGCTCGCCAAGCGAGTACCCCCCCAGCAAACACTACCTAAGTG TTAAATTAAAGGCAAGCCCCGGTTTTATGCATAACCGTTATTGTATGTTATTTTACTACA CTTAATGTTTGTAGGCTTGTACTGTGCACTTAAGTGTAGGAGTTGACTGAAACCCTAGTT GCATGAACTCAGGTTCCCTTTTGAGATGGATACTAGTATGCTAGGTCGAGTAGCTGCTTT ACTAATTAGGGATCTTGGTAGAAGTCGAGTGATTTTTCTAGCACTCGCGCGAGGTCATGA ATTGGTTGTATCCACTTTGATAACAGAATGGTGATGGTCTGTGGACACGAGTCCATGGGG ACGCGTGGTCTACGAGATGAAAATTGGAATAAGGATTAACGTGCGGATACCTGTGTCAAG CGTTTGAACGTACTAAACACATACCGAGAAATATGGTAAATCGGTAAGCCTAGTACCTGA GTGAACCTGCCCGCAGACATATCCCCTCACGCGACCTGAGACGTGGTCTCCCATTCCGGT TATGGTGGGTACAAGTGCGGTCACTGCACGACGGCAGTCGGGGTCAGTGAGGCATTGTAC GCCAAGGCGGTGAGCCCTGATCTGTTGCCAGGGAATCGACGGGGACGGTTGATGTGTGTG GGGACGGAGTGCCTTGCCACGTCGTGTGTTTAGGTTTACCTTGCAAGGATAAAAACTCGA TTCGAATCGTCTGCTTCTCGCAGCTAATGAGACTGCTTGATCCATTGTACTGCATTGAGT AATAAGTGGAAATGAGGTGACTGGCAAAAGATGTTGATTGATAAAATGTTTGATACCATG TATGAATAGCTAGGTACACATCTAGTATAAAGGATTCTACTAAAACTTGAAAAGCTAAAA CTTGATTTTAGACTCAGCTAGTGCTTTTGGCAAACCAAACCCCTCAGCCAAACAGCTGCA TGTCTAGAGGTAGAGGAGTAGACTCCTCACACCGGGTAAGTCTAGCTGAGTATTAGTATA CTCAGCCTTGCTTGTGGCATAATTTTTGCAGGTTCCCTTAGGGTGATTGGTTGCTGGTGT GACTTGGCCTCCATCCCTGCCACCGGGATAGACGGTCGAGTGGGTTATTGCTTCCGCAGG AGAGGACCAGGAGGAGTAGTGTGGCCAGACTTCGCCATGTTACTCGGTTCTTCTCCGTTA GTTATTTCCGCTGCATTAAAATTTATGGTTATTATTTTTGAAACTCTGATAATGTAATCA CTAATGATACTTATTAAATTTGTGGTATTATGTTTTATTGTATTTCTCTGTGCCTCACCT TCGTGTGAGCTAGTGGTATTCGATCCTGGTAAGTGGCTTTATCGGACTAGATCCGAGGGA CTGACAGATTATTCCTGTTTAAGTGTGTTGCTGCCCTTAAGGGTGCGACTTGGGCACTTA AGCTGGAATAATTCGGGCGGTTCCGCCACAGTTTTGCGCCTTATGCAATTGGGAACCCAA CATACACCAATGTTGAGGGACCAAATATGCCTATCGAGGGATGTAATATGCATGTAGAGG GATCAAATATGGGTATTGAGGGGAAAATGGTATGTGAGACACAACACCACTACCAAGACT GATCACGTTATGCCAGGTGTTACTAATGATTTCTTTGGGCACAAAGACGTGGGTCAAGAC GACGTCGAAGTTTAGGTTGGTAAAAGAAAACAAGTGAACTTTTTTCGTAGCAAAATTGCA TTATTATTCTGAGTCATCAACATTATTTATGAAAGTATGGAGGCTTTAGAGGAGACCGCA ACATAACATTTTTACGAAGAGTCTAAGGGTTGTACCCAAAAATCACAATATTGTGATCTG TTATTTAGTTGTTGATACTTTAAGGTCAATTCAGTTAGTCTGATGTTAGCTTCAACGAGT GTTATTAGTTCTAGCAAAACTCCTTCTAGAGGAGAACAAAGTGTATGCTAACATGTAATG TACAAAGAAGCTAGCGAGTTCGTTGATTATGGGTATCGAAAAGATCCACGTGTGTAGGAA CTATTGTATCCTATATTGAGGTGAGGATTATGAAGGCTTACAGAGATGTCTAAATTATAG TGCTAATAGATACAAGACGAACAAAGATTATCTCGGGAAAGAGAATGGAGCCTCTGATGA AGACCTCCAGTTAGTAGTATTATAATGTTCTAAAACCAGTAGATTTTTTTGTAAAAATCC TAGAAACTTCGCCCAAGTGTATTTGATGCCCAGGATAATGAACAAAGATCTTTTGCCTTT TTTCTTGTCACATTTTTATTAGAGTTAAATGCATTGTAGCCCATGTACTTGTCAAGAGAT GTCATTTAGGTATACGAACTTTGGAAATACATTTATGGGTCCTTAAATTTATTAAGTGGC ATACCGCAGTGGTCGGTATGATCCAAAGATGAACTTATCATTTACCATTTTTACAAGTTC TTAGCATGTTTAAGGGATCCAGAAATGCATTTTCAAAGTTTGTGGATCTAAGTGACATAC TTAACATTTAACTCCTTTTATTATATCAAAAAAGTTTAAATGCATCAATAGCAAGGAAAT GCATGAACTATGTTTAGGATCATTTTACATACATGATGACTCTCTTGTACATGTGATTTT ATTTTAGAATGTGAACATCATTACTCCGTTAGTATTACCTGTTCTCTAAGTATCATACAG TGACGTTCAGGTTGGCTATAGCAAATAAACATATACTCCCTCCGTTCTTTTTTATTTGTC TCATTTTAGTTCAAAAATAAACTAGTTGGTGACAAATATTCGAAAACCGAGGTAATATGT GATTGGTTAGCTGTACCGTCTCGTCCCGCGTCACCACGTGCGTTGACTTTATCTGAGTTT GTGTTTGGTTGCCTGCACGTGTGAAGTGCAGGCTGTATAGACAGACATAAAATAAGTTAT ATTGGTTGCATCCACACGTACGCCTAAAACAGTCGTACGTGGTTGGCCAGGCTCACGCGA GATTATACGCGTGGGTACGGTCATCCAATCAGGCGTATATGTACCAAGTACCGGATTGCA TCATCATCGACACGTAGATATATGTTGCTACGGGGCAATTATATCGGTTCCACGGATGCC TAACTGAATTTTGTTGTCACTGCCGTGGGGGCTCTCATGCTCCAATCTTCATGGAGTCCA CTCCACAGAATCAGATGGACATGGATTTGCTTCCCATGCCAATTGCAACGAGAAAGGAAA CATGTTTGAGAATTTTCGTCATGAAAAACCTGCAGGTGGACTCGATTCAGCAGTTAATCA GTTCGGGCACATTTATCTCCTTGCGATCATGGCTGAAGAATCTGAGGGCCGGATCCATCT ATGTCTGCACGTATGGGTCATGGCGTGTCTGCAAGCATGCACACTCTACTGCACATATCT GCTGCCAACCAAACTCTCCCGCGTTGTTCTTCTTCACAAGCAACGCATGCAACTCTCTTC AGCGCGCCTATATAAACGGCCGTGGGCATGCAGCTTACTCACTCACCACCAGGTCACCAT CCAATCCAGCAACCAGCACCAGCACCAACCTGAGCAAGCCTTGCAAAAAGAGCTGCACTA TATCCATCGATTCTGTTCTGATCTTGTTCGCTAGCTTGAGTGTTCAGCCCGGGCTGCAAG CCTGCAACTAACCACCTGCACTGCAGCGTGATTAGCTCTACAAATCGCATCCAGCGGGAA GCTGATGAAGCTTGTGTACATGGTGACCCTCCTACCGTTGCTCTTCATGTCCGGCGTTCT TGAGGCTGCAGGAGCGGGCAATGACAGCTCGGCTGACGGCACGAACGGCAACTTGCACAG CTCTGGCACCAGCAGACCCGCCGCCGCGCCCAGGGGAAGGTCGCTGCAAGCATCGCAGAG CAGCGTGTACAGCGTCGACCGCTACGGTGCCCGTGGCGACGGGAGGAACGATGACACGCG GGCGCTGGAAATGGCGTGGAAGGCGGCGTGCGCCTCGCCACGGCCGGCCGTCGTGCTCGT CCCTGACGGCAGGCGTTACCTGCTGAAGCTCCTCACCCTCCGCGGCCCGTGCAAGTCCAG CGTCACGCTCACGGTGAAGGGCACTCTGGTTGCATCGCCAAACCGGGCGGATTGGAGCGA CAATGACAGGAGGCACTGGATCGTGTTCCGGAGCATCGACAAGCTCACCGTCAACGGCGG TGGCGCCATCGATGGCAACGGCGAGAAATGGTGGCCTCACTCGTGCAAGATCAACAAGGC TCTCCCTTGCAAGGAGGCTCCGACGGCTCTGTCATTCCACTACTGCGTCGACCTGAAAGT GGAGGATCTGAAAATCGTGAACAGCCAACAGATACACATGTCAGTCGAGGATTCTGCAAA TGCGCTGCTGGCGCGGTTGTCCATCACAGCGCCTGGCACCAGCCCTAACACTGACGGCAT CCACATCACTCGCAGCAAAGATGTACGCGTCACAGACTGCAAGATCAAGACAGGGGACGA CTGCATGTCAATCGAGAACGGGACTCACAACCTCCATGTCTCCAAAGTTAACTGTGGTCC AGGGCATGGGATCAGCATCGGAAGCCTAGGAGACGACAACTCAAGAGCAGAAGTCTCCGG CATCACCATAGATTCAGTGCAACTACACGGCACAACCAACGGAGCACGCATCAAGACGTA CCAGGGAGGCAGCGGATACGCCAAGGACATCACGTTCCAAAATATGGTTATGTACGACGT CAAGAACCCGATAATCATCGACCAGAACTACTGCGACAAGGCTAAGCCATGCGGAGAACA AGAGTCAGCAGTGCAGGTCAGCGGTGTCGTCTTCAAGAACATTAGAGGGACGACCAGTAC CAAGGACGCCATCAAGATGAACTGCAGTGAGAACGTCCCATGCCAAGGCATTACCTTGCA GAACATCGACCTGAAAATGCAGGACGGCAAGGGCAACACAAGAAGCACTTGTCAGAATGC AAAATGGACAGAATTTGGGACAGTTCGCCCGCAGCCTTGCACTGCCATAAAGTAGGGGGC AATTGAAGTCTGTTGCTCGTGCTTTGTAGTCTGTACAGATGGAGTAGTCATACTCATGTA TATATATACCGCCAACTCTAGTAACACCGTACATGCGGTCATGTATAATATTGTTTTGCA CTGTAGATGCATTGTTTGTAGATATAA