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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034543_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:295923427:295924026:1 gene:Zm00001d034543 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem I reaction center subunit II-1 chloroplastic
Sequence

ATGGCCATGGCCACGCAAGCCTCCGCCGCCACGCGCCACCTGCTGGCCGCCGCCTGGGCG
CCGGCGGCGAAGCCGCGGCAGCTGAGCTCGCAGCTCGCGCTGCCGTCGTCGTCCTCCCGC
GGGCCGGCCCCGCTCCGCGCGTCCACCGAGGAGGCGGTGGAGGCGCCCAAGGGGTTCGTG
GCCCCGCAGCTGGACCCCAGCACGCCGTCCCCGATCTTCGGCGGCAGCACGGGCGGGCTG
CTCCGCAAGGCGCAGGTGGAGGAGTTCTACGTCATCACGTGGACGTCCCCCAAGGAGCAG
GTGTTCGAGATGCCCACCGGCGGCGCCGCCATCATGCGGGAGGGCCCCAACCTCTTGAAG
CTGGCGCGCAAGGAGCAGTGCCTGGCGCTCGGCACCAGGTTGCGCTCCAAGTACAAGATC
ACCTACCAGTTCTACCGCGTCTTCCCCAACGGCGAGGTGCAGTACCTCCACCCCAAGGAC
GGCGTCTACCCGGAGAAGGTCAACCCCGGCAGGGAGGGCGTCGGCCAGAACTTCCGCAGC
ATCGGCAAGAACGTCAACCCCATCGACGTCAAGTTCACCGGCAAGGCCACCTTCGACTAA

Peptide Sequence

PEP ID

Zm00001d034543_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:295923427:295924026:1 gene:Zm00001d034543 transcript:Zm00001d034543_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem I reaction center subunit II-1 chloroplastic
Sequence

MAMATQASAATRHLLAAAWAPAAKPRQLSSQLALPSSSSRGPAPLRASTEEAVEAPKGFV
APQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPNLLK
LARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRS
IGKNVNPIDVKFTGKATFD

Transcript Sequence

Transcript ID

Zm00001d034543_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:295923427:295924026:1 gene:Zm00001d034543 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem I reaction center subunit II-1 chloroplastic
Sequence

ATGGCCATGGCCACGCAAGCCTCCGCCGCCACGCGCCACCTGCTGGCCGCCGCCTGGGCG
CCGGCGGCGAAGCCGCGGCAGCTGAGCTCGCAGCTCGCGCTGCCGTCGTCGTCCTCCCGC
GGGCCGGCCCCGCTCCGCGCGTCCACCGAGGAGGCGGTGGAGGCGCCCAAGGGGTTCGTG
GCCCCGCAGCTGGACCCCAGCACGCCGTCCCCGATCTTCGGCGGCAGCACGGGCGGGCTG
CTCCGCAAGGCGCAGGTGGAGGAGTTCTACGTCATCACGTGGACGTCCCCCAAGGAGCAG
GTGTTCGAGATGCCCACCGGCGGCGCCGCCATCATGCGGGAGGGCCCCAACCTCTTGAAG
CTGGCGCGCAAGGAGCAGTGCCTGGCGCTCGGCACCAGGTTGCGCTCCAAGTACAAGATC
ACCTACCAGTTCTACCGCGTCTTCCCCAACGGCGAGGTGCAGTACCTCCACCCCAAGGAC
GGCGTCTACCCGGAGAAGGTCAACCCCGGCAGGGAGGGCGTCGGCCAGAACTTCCGCAGC
ATCGGCAAGAACGTCAACCCCATCGACGTCAAGTTCACCGGCAAGGCCACCTTCGACTAA