Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034523_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:1:295618058:295620746:1 gene:Zm00001d034523 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pheophorbide a oxygenase
Sequence	ATGCCCCTGGCCGCGGCCGCCGCGCCATTGGTCTCCGCGAGGCTAAGCGTAAGCGGCGGC GCGCGCTCCGTTCGGAGGCGGCGACGGCGCCGCGCCGCTGGGCTGTCGGTGTTCGCCGTG GCGACCGAGACGCCGCGGACCGAGGAGCAGCAGCCGTCGCCGTCCGGGGAGGAGCGGTTC GACTGGCTGGACCAGTGGTACCCGCTGGCGCCCGTGTGCGACCTCGACCCGCGCGCGCCG CACGGCAAGACGGTGCTGGGGCTCAGCGTCGTGGCCTGGTACGACCGCGGCGCCGGCGAG TGGCGCGTCTTCGACGACGCCTGCCCGCACCGCCTCGCGCCGCTCTCCGAGGGCCGGATC GACGACAGGGGGCGCCTCCAGTGCGTGTACCACGGCTGGTGCTTCGACGGCGCCGGCGCC TGCAAGTTCATCCCCCAGGCACCCGCCCTCGGCCCGCCGGTGCACACGAGCAGCAGGGCG TGCGTGGCGTCGTACCCCTGCGTGGTGCAGAACAACATCCTGTGGTTCTACCCGAGGGCT GACCCCGAGCATAGCGACGTGCTGCAGAGGAAGCGCCCGCCGCTCATCCCTGAGATTGAC GACCCGGACTTCGTCACCGTCTATGGCATCAGAGACCTCCCTTACGGGTATGATATTTTG GTTGAGAACCTCATGGACCCTGCTCATGTCCCGTATGCACACAAGGGGATCATGCGTGGC ATTCGCAAGAAGGAAGATCCTGGAAGAGTCGACTACGATAAAGAGGGCGGCGGTCCAGTC AAGATGAAGATCGAGCAGGCAAACATAGAAGGGTTTGTGTCACCGCAAGAGCGGGGCTAC TTCCAGTTCGTCGCGCCCTGCACGTTCTTCGGCACGCCGTTTGTGCAGGAGGTGTGTGAG TCCCCCTCCCTCTCTGTCAATGCAAGTGAATACCGGAATGAATCCGTCGAACCATCTTAA

Peptide Sequence

PEP ID	Zm00001d034523_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:1:295618058:295620746:1 gene:Zm00001d034523 transcript:Zm00001d034523_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pheophorbide a oxygenase
Sequence	MPLAAAAAPLVSARLSVSGGARSVRRRRRRRAAGLSVFAVATETPRTEEQQPSPSGEERF DWLDQWYPLAPVCDLDPRAPHGKTVLGLSVVAWYDRGAGEWRVFDDACPHRLAPLSEGRI DDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRACVASYPCVVQNNILWFYPRA DPEHSDVLQRKRPPLIPEIDDPDFVTVYGIRDLPYGYDILVENLMDPAHVPYAHKGIMRG IRKKEDPGRVDYDKEGGGPVKMKIEQANIEGFVSPQERGYFQFVAPCTFFGTPFVQEVCE SPSLSVNASEYRNESVEPS

Transcript Sequence

Transcript ID	Zm00001d034523_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:295618058:295620746:1 gene:Zm00001d034523 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pheophorbide a oxygenase
Sequence	GATCCCCTCTCCCTCCTGCAGCTCCCTCGCGCCTCGCGCCCACCGATGCCCCTGGCCGCG GCCGCCGCGCCATTGGTCTCCGCGAGGCTAAGCGTAAGCGGCGGCGCGCGCTCCGTTCGG AGGCGGCGACGGCGCCGCGCCGCTGGGCTGTCGGTGTTCGCCGTGGCGACCGAGACGCCG CGGACCGAGGAGCAGCAGCCGTCGCCGTCCGGGGAGGAGCGGTTCGACTGGCTGGACCAG TGGTACCCGCTGGCGCCCGTGTGCGACCTCGACCCGCGCGCGCCGCACGGCAAGACGGTG CTGGGGCTCAGCGTCGTGGCCTGGTACGACCGCGGCGCCGGCGAGTGGCGCGTCTTCGAC GACGCCTGCCCGCACCGCCTCGCGCCGCTCTCCGAGGGCCGGATCGACGACAGGGGGCGC CTCCAGTGCGTGTACCACGGCTGGTGCTTCGACGGCGCCGGCGCCTGCAAGTTCATCCCC CAGGCACCCGCCCTCGGCCCGCCGGTGCACACGAGCAGCAGGGCGTGCGTGGCGTCGTAC CCCTGCGTGGTGCAGAACAACATCCTGTGGTTCTACCCGAGGGCTGACCCCGAGCATAGC GACGTGCTGCAGAGGAAGCGCCCGCCGCTCATCCCTGAGATTGACGACCCGGACTTCGTC ACCGTCTATGGCATCAGAGACCTCCCTTACGGGTATGATATTTTGGTTGAGAACCTCATG GACCCTGCTCATGTCCCGTATGCACACAAGGGGATCATGCGTGGCATTCGCAAGAAGGAA GATCCTGGAAGAGTCGACTACGATAAAGAGGGCGGCGGTCCAGTCAAGATGAAGATCGAG CAGGCAAACATAGAAGGGTTTGTGTCACCGCAAGAGCGGGGCTACTTCCAGTTCGTCGCG CCCTGCACGTTCTTCGGCACGCCGTTTGTGCAGGAGGTGTGTGAGTCCCCCTCCCTCTCT GTCAATGCAAGTGAATACCGGAATGAATCCGTCGAACCATCTTAACTTACAAGCGCCATT CACTGTTCTTTTGAACGCGCACCGTTCACTGCTCTTGGTGGGTTGGTGACCAGGGCCAGA AGAAGAAGGCGCCTCGGGTCATGCTGGTGTTCTTCTGCATCCCGGTCGGTCCTGGCAGGA GCAGGGTGATCTGGGCGTTCCCGAGGAACGTCGGGGTCTGGCTCCACCATATCACGCCAC GGTGGCTGTACCACGTCGGCCAGAACCTTATATTGGATTCAGACATTTTCCTCCTCCACG TTGAGGAGCGTAAATTTGCTGCGGCAGGGCTGGATAACTGGCAGAGAGCTTGTTACGTGC CGACGTCGTCGGACGCCATGGTGGTCGCCTTCAGGAACTGGTTCAGAAAATTCTGCAAGA ACCAGGTCGGCTGGGCAACCTTACAAGTCGACCAGCTGCCACCAACGCGTACCAAGGACC AGCTCATGGAGAGGTACTGGTCGCACGTGGTGCAGTGCAGGAGCTGCAACGCGGCGCTCA AGGCCATGAAGGCGCTCGAGGCTGCCCTGCAGGTGGCCTCGGTCGCCGTCGTCGGGTTCC TTGCCGTCGCTAAGGGAACGGTCCTCACGTCAACTGTTCAGAGGGCCGCAGTCGTGTCGG CGACCGTGCTGTGCTTCGCTGCCTCCCGTTGGCTTGCCAACTTCATCCAGAAGAACTTCT ACTTTCAAGACTACATCCACGCCTACAAGTGACACGCTCATGAATACGTTTTTAAAGGTT TTTGTTGCTAGGAGATTGTTGTTTTTACTGTGAATGCATATTATTAGGAGAATTGGGTGG GTAGAAAGCAGTATCTATACTGCATTAACTTGTATATAATAATGCATATAATCGATAATA AAACGGAAGACACGCGGCTTCAGTTGT