Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034516_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:1:295472494:295480937:1 gene:Zm00001d034516 gene_biotype:protein_coding transcript_biotype:protein_coding description:Squalene synthase 1
Sequence	ATGGGAGCAGGAATGGCAAAATTTATATGCAAGGAGGTTGAAACTGTTGATGACTATGAC GAGTATTGTCACTATGTAGCCGGGCTAGTTGGTTATGGACTTTCCAGGCTCTTTTATGCT GCTGGGACGGAAGATCTGGCTCCAGATTCACTATCAAATTCAATGGGTCTCTTTTTACAG AAAACTAATATAATTAGGGATTATTTGGAGGACATAAATGAGATACCAAAGTCCCGCATG TTCTGGCCTCGAGAGATATGGAGTAAATATGCAGATAAACTCGAGGATTTCAAATATGAG GAAAATACCGAAAAGGCAGTACAATGCTTGAACGATATAGTGACGAATGCACTGATTCAT GCTGAAGAGTGCCTTCAGTACATGTCAGCCTTGAAGAACCATGCCATCTTCCATTTTTGC GCAATTCCCCAGATAATGGCAATTGGAACATGTGCTCTTTGCTACAATAACGTGCATGTC TTTAGAGGAGTTGTAAAGATGAGACGTGGTCTCACGGCACGAATAATTGACGAGACAAAT TCAATGTCAGACGTCTATACCGCTTTCTATGAGTTTTCTTCATTGATAGAGTCAAAGATT GATGACAATGATCCAAATGCTGCTCTAACACGGAGACACGTGAATTCAATAAAGCAAACT TGCAAGTCATCTGGTTTGGTAAAGAGGAGGGGGTACCATTTGGACACATCACCTTACAGG CCTATGCTGATCATGATTGTCCTCCTGCTGGTGGCTATCCTTTTCGGGGCACTGTATACC AAGTGA

Peptide Sequence

PEP ID	Zm00001d034516_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:1:295472494:295480937:1 gene:Zm00001d034516 transcript:Zm00001d034516_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Squalene synthase 1
Sequence	MGAGMAKFICKEVETVDDYDEYCHYVAGLVGYGLSRLFYAAGTEDLAPDSLSNSMGLFLQ KTNIIRDYLEDINEIPKSRMFWPREIWSKYADKLEDFKYEENTEKAVQCLNDIVTNALIH AEECLQYMSALKNHAIFHFCAIPQIMAIGTCALCYNNVHVFRGVVKMRRGLTARIIDETN SMSDVYTAFYEFSSLIESKIDDNDPNAALTRRHVNSIKQTCKSSGLVKRRGYHLDTSPYR PMLIMIVLLLVAILFGALYTK

Transcript Sequence

Transcript ID	Zm00001d034516_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:295472494:295480937:1 gene:Zm00001d034516 gene_biotype:protein_coding transcript_biotype:protein_coding description:Squalene synthase 1
Sequence	GGCCCGAACTCCGCAATGCCGTGTGCATCTTCTACCTCGTGCTCCGTGCCCTCGACACCG TTGAGGATGACACTAGCATCCCGACCGAGGTGAAGGTGCCCATCCTCCAGGAATTTTATC GGCACGTCTACAACCGCGACTGGCATTATTCATTGTGTGTGGCTGGGCCTTACAGGTGGA ACAAATCACTACAAAGTGCTGATGGATAAGTTTCACCTCGTATCCACTGCCTTCCTGGAG CTTGGTCAAGGGTAACTTTTATTTCTTCTCTGACTTTAGTTGCCTTCTTCAGACTTCAGC TAGTCATTACTGTCCTTACTTTGATAATTTGACAACTTGAGGTTTCATATATAGATTGTT TTCCAAGTCTTGGCTACACTTCAATTCTTCAGCGATCACTTTTTACAAGAAATATCTTAC TTTCTAAATATCAAGCTTTCACTGGGTAGTATGATAATATATTGCCTGGTTTTGAAATCG TTCTATCATTATCACGCTGCATGATGGAAGCAAGGAGCCAAGTTTTGATAGTTACACATC GGAGACAATTTGTATGAGGACAATGTTTGTTTTTATACTTTTACTAGCAAATGTGCCGTT CCCTAAATTAAACCCAATGCATAATGATGTATTGTCCAATGCTGATGCTGTATCTAAATT ATCCATTTCAGGACTAGTTTTTTAATGTTGTCATAGTAATATTAATGCAGAATATGTACT TGAAGTTTTATCTCCGTCCTTTGATTTTCTTTGCAGATACTACTTTAGTAAATAGTATTG TGGTAAATAATGTTCTCATTTGGATACATGGATTTTAAGAATCCGGATTTAAAAAATCTC ATAATCCTGGAATCCCTTCGGGACATTCTAGATTCTAGTAGATTTTACCACACAAGCACG GAATCCAATAAAACACATTAGATCTTTTTTATCCAGATTCTTAACTTATTTGGTTTTCAG CTATCAAAAGGCAATCGAAGAAATCACTAGGCGAATGGGAGCAGGAATGGCAAAATTTAT ATGCAAGGAGGTTGAAACTGTTGATGACTATGACGAGTATTGTCACTATGTAGCCGGGCT AGTTGGTTATGGACTTTCCAGGCTCTTTTATGCTGCTGGGACGGAAGATCTGGCTCCAGA TTCACTATCAAATTCAATGGGTCTCTTTTTACAGAAAACTAATATAATTAGGGATTATTT GGAGGACATAAATGAGATACCAAAGTCCCGCATGTTCTGGCCTCGAGAGATATGGAGTAA ATATGCAGATAAACTCGAGGATTTCAAATATGAGGAAAATACCGAAAAGGCAGTACAATG CTTGAACGATATAGTGACGAATGCACTGATTCATGCTGAAGAGTGCCTTCAGTACATGTC AGCCTTGAAGAACCATGCCATCTTCCATTTTTGCGCAATTCCCCAGATAATGGCAATTGG AACATGTGCTCTTTGCTACAATAACGTGCATGTCTTTAGAGGAGTTGTAAAGATGAGACG TGGTCTCACGGCACGAATAATTGACGAGACAAATTCAATGTCAGACGTCTATACCGCTTT CTATGAGTTTTCTTCATTGATAGAGTCAAAGATTGATGACAATGATCCAAATGCTGCTCT AACACGGAGACACGTGAATTCAATAAAGCAAACTTGCAAGTCATCTGGTTTGGTAAAGAG GAGGGGGTACCATTTGGACACATCACCTTACAGGCCTATGCTGATCATGATTGTCCTCCT GCTGGTGGCTATCCTTTTCGGGGCACTGTATACCAAGTGACTTGTAGCTGGCCTTTTTCC CCTATGGAGACGAGACAAACTCTGCCAATCTGATCCTTTTCGTACTCTGTAGTCCCCAAT GACTGCAGGAAGTTCGGAATTACTGGCTGTAGAAGTGTAGATCATACGGCAGCATGCTAC TGCTTCCATGACTCCGTTACTGCTCTCGATTCGTTTCTTCATTATGTTTTTTCGCGCGTT GTATCGTTTGAAGCTGTTTTAAGCAACGGAAAAAAAATACCATGTGACACGTGTATCCTA CGAACATGGGTTTCTGTTTAGTTAGCAGTGGGCGCACTGTATTATGTTGTCTTGTTGACA TGTCATGTTTTCAAAGCTGACGTGTTTGTGTTTACCAGAATTGTGTAGT