Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034515_T017
CDS Infomation	cds chromosome:B73_RefGen_v4:1:295313934:295336299:-1 gene:Zm00001d034515 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 65 description:Homeobox-DDT domain protein RLT3
Sequence	ATGGCTAAATATGGTTTACGTCCCCGCACACTGAAAGGAGAATTGTTTGCACTGTTGTCT AAGGCAGGAAGTTGTGGGTTAAAGGTTTCAGTACTAGCCAAATCATCTGAGATTATTGAT CTTAATGTTTCGAGCCCATTAGAACTAGAGCAGTTGATATCTTTAGCTCTCTCCAGTGAC ATCACATTATTTGAGAAGATTGCACCTTCTGCATATCGTCTCCGTGTTGACCCCCAAATT AAAGGGGAAGAAGATTCTATGTCAGATAGTGATGATTCTGGAAGTGTTGATGAGGATGAG GATGCTAGCCGAAGTGATGATGGATCTGATGGTTCCCAAAAGTTAAAATTTCTTGAGAAT GAAAGCAGACTTGCTCGAAGGAAGGAGAAAAATGCACATGGAAGTCCAAATAAATGTAGT GAAATTGATGAAAGTTATTCAGGTGAAAAATGGCTTTTGGCATTGATGGAAGGCGAGTAT TCAGATCTAAGCATTGATGAGAAGTTGGATTGTTTGGTTGCTTTAATAGATGTTGTTTCT GGTGCTGGTTCTGTTCCAAGACTTGAGGAACCGCAAAGAGTCTTGCATAATGTGCCCAGA GTGCATCCACCACAATCAGGTGGGAAAATAAAGAAATCAACTAAAAACCTTTGTCAATAT AGCGATGAGTCCTTAAATGGTTCAGGAAGTTTGGATTGTTGTCATCAAGGCCAGTCAGGA AGGCGAAAAAATCAGGATTACACCACTGACCCTGGAAGGAACGATTTACCTATTGCTGCT CATGGACCACAAGTTGTTCTCTTAGGATCAGACCGCAGGTATAATAGCTATTGGCTCTTC CTTGGTCCTTGTAGGGAAGATGATCCAGGGCATCGTAGGGTCTACTTCGAGTCCTCAGAG GATGGTCACTGGGAGGTGATTGATTCACCACAGGAATTACTTTCCTTGCTATCTATCCTC GATAGCAGGGGCACTAGGGAAGCACATCTCCTTACATCGATGGAGAAGAGACAAGCCTGC CTTTTTGAAGCCATGAAAAAACATGTGGAAGGAGGGAAGGCAGCCAGGCTTCCAGCCTCA TCTGATTCATACTGCTCCCAGACAAGTAGTGGAGATGGAACTTCGCCCAAGACAAGTAGT GTGGATGGAGCTTCATCTGTATCAGACATTGAGAACACTTCTGTTCCTACAAGCCTCAAA GATAGTAATTTGGATTCATCGTCTGCCGTAGTAATTGAAAGTGGGAGGGGAGGTGATGAG AAAATATCTATGTGGGAACGGCTGCAAGCATTTGATAAATGGATCTGGACTTCTTTTTAC TCCATCCTTACTGCTGTTAAAAGTGGCAAGAAGTCATTTAAGGAGTCACTACTTCGTTGT GGAAGTTGTCATGATCTATATTGGAGAGATGAAAAGCACTGCAGAATATGCCATTCAACT TTCGAGGTTGGTTTTGATCTTGAAGAAAAATATGCTGTACATGTGGCGACGTGCAGGGAG CCTGAACTTTCACATGAGGTACCAAATCATAAATTTCTGCCATCACAGCTACAGGCACTT AAAGCAGCCATTCATGCTATTGAGGCCTCTATGCCTGAGGCAGCTTTTACTGGTTCTTGG ATGAAGTCTGCTCACAAGCTGTGGGTTAAGCGGCTGCGACGAACGTCATCATTGCCAGAG CTTTTGCAGGTTCTTGTCGATTTTGTAGGGGCAATGGATGTTGATTGGTTGTACAAAAGT TCATCTGCGAGATTGAGAACAAATCTGGATGACATCATTGTCGACTTTCAGACAATGCCA CAAACAACATCAGCAGTTGCACTTTGGGTTGTCCAATTGGATGCCCTCATTGCGCCTTAT TTGGATAATGCCATGGCAAGACAGCTGGTGAATGCTAGGTAG

Peptide Sequence

PEP ID	Zm00001d034515_P017
PEP Infomation	pep chromosome:B73_RefGen_v4:1:295313934:295336299:-1 gene:Zm00001d034515 transcript:Zm00001d034515_T017 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 65 description:Homeobox-DDT domain protein RLT3
Sequence	MAKYGLRPRTLKGELFALLSKAGSCGLKVSVLAKSSEIIDLNVSSPLELEQLISLALSSD ITLFEKIAPSAYRLRVDPQIKGEEDSMSDSDDSGSVDEDEDASRSDDGSDGSQKLKFLEN ESRLARRKEKNAHGSPNKCSEIDESYSGEKWLLALMEGEYSDLSIDEKLDCLVALIDVVS GAGSVPRLEEPQRVLHNVPRVHPPQSGGKIKKSTKNLCQYSDESLNGSGSLDCCHQGQSG RRKNQDYTTDPGRNDLPIAAHGPQVVLLGSDRRYNSYWLFLGPCREDDPGHRRVYFESSE DGHWEVIDSPQELLSLLSILDSRGTREAHLLTSMEKRQACLFEAMKKHVEGGKAARLPAS SDSYCSQTSSGDGTSPKTSSVDGASSVSDIENTSVPTSLKDSNLDSSSAVVIESGRGGDE KISMWERLQAFDKWIWTSFYSILTAVKSGKKSFKESLLRCGSCHDLYWRDEKHCRICHST FEVGFDLEEKYAVHVATCREPELSHEVPNHKFLPSQLQALKAAIHAIEASMPEAAFTGSW MKSAHKLWVKRLRRTSSLPELLQVLVDFVGAMDVDWLYKSSSARLRTNLDDIIVDFQTMP QTTSAVALWVVQLDALIAPYLDNAMARQLVNAR

Transcript Sequence

Transcript ID	Zm00001d034515_T017
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:295313934:295336299:-1 gene:Zm00001d034515 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 65 description:Homeobox-DDT domain protein RLT3
Sequence	CTGCCATCACCCGCTCGCTGCAGCCGCCGCGCCCCTCCCACTCACCAACGCGGCAACGCC CATGGCGCCCGTCTGCTGAAAACACCCGCCGCCATGCCTCGCGACCAGATGGTGACCAAT GGTTTTGGAGCAAAAAGGGATAATGCAGGGGCAAAAAAATCTCCCCAGCAAATTCAGAGG CTGGAGAAGTTTTACTCTGATGTACAGTATCCAAAGCCAGAGGAAATGGGTGAGTATGCA ACCTGTGTTGGTTTGACTTACAGTCAGGTCCGTATATGGTTCAAAGAGCGAAGGAGAAAA GAGAGGAGGATGGAGATGGGAGCCATTGGGTCTCAGATGGAAAGGCAATTTAGTGCACGT TCCAGTGGACCTAGATGCAGCAGCAGTTCTTCGTTTTGTAACCAAGCTCCCATCTATGAC ATTTCACGTTCAGAGTCGGACACCTGGGGTATGAGCACGGCAGGAGAGGAAAGTAAAATT CTATCACAAGTTCTGTTTCCCAAGGATTATATCCTGAGCAAAATTTTCCGCAAGGATGGT CCACCTCTTGGTAGTGAATTCGACCCCCTCCCCCAAAGTGCACATGGCTGTATCAGAGAC ACTACATGCCATCATTCCTCTGAGAACCAAAGAACTGTGAAGAAGAGAAAGATCATAGAG TCAACTAACCAGAGATCTGATGTGTATGAGAATACTGCTCCTGTGAGGAAACATGGAATT GGCAAAGGTCTAATGACAGTGTGGCATGCCATGTATTCCCATAACGTGAAATGTCAAAGC GGTCGAAATTTCATTGATGAAACTGGTTGCTTGAGGTCTCTTAGACCGTTTGACGATTTT GATGGATTAGAAGATCGCGATAATGGAAGGAAGACTCAAAATCAAGGTATGACACGGAAA AAGATAGTCAAAAGGAGTAAAGTTCTGGTGAATAGAAAAAAGGTGCCGTGTAAGAGAGTT ACTGGTCCAAAGGTGCATCCTCCAATGGCTTGCCATCTTTCAGTTGATGAATCAGAATCT TTAGAACTACAGACTGAACTAGTGACTTTAGTGGATGATGAGGAGCTCGAGCTCAGTGAA TTACAAACAGGTCCGAATCCATTGAGATGTTCAGCTCACCTGTCTTCAAGTGGTAGACAT GACTGCCCCCTTTGTAAAGATTTACTTGCCAAGTTTCCTCCACAAAGTTTGAAGATGAAA AAGCTATTCTCTACAAAACCTTGGGAGTCATCACCTGAAATGGTGAAAAAGCTTTTTCAG GTCTCCTTCTGAAGCATCTGGATGAAGTTGACAACAAGAATGATTTACCCTGGGTGCATC TCATCTGGAACCCCTACTACACAAATTGATAACATTCCACTTACTTGGCTTGTTCTGGTG GGATGTAATGTTATACTTCAACTTATTCAGTGGACCTTTTTTCCTGCTCAATAGGAGATG GAACAACTGTTTAATCTGGACTGGCGTATAGAATGGCATGCAATTGCAAATGCAACAAAA TTTCCTTAAACTCTTCCCTCTTTGGTGAAGAATGGATCCATGCTGCAGCATTGGGTGCCG CCTTCTGCATCGGATGTTAGAATTATTTAGATTATCCGGTATGTATACACTCATTTTGGC AGTATTGATGTCCACCCCTTCATATTTGATGAGTTTGTGCAAGCATTCCATGACAAGGAC TCCTCGTTGTTGGGGGAAGTACATGTTGGTCTTCTCAAGCTACTGTTGTTAAAGGCTGAA ATAGGAAGTGATGGTGTATTTGTTCCACGATCTTCTAAAGACTGCAGATTTCTCAGTTTC CTGAACTTTGTTAGGGAACAAGAATTCGATGCCAATGTTTGGATCAGATCGTTGAATGCT CTTACATGGGTTGAGATACTTCGTCAAGTCCTTGTTGCTTCAGGCTTTGGGCCAAAACAG CATTTGCTGAATCAAGAATTCTTTAACAAGGAGAAAAATCAAATGGCTAAATATGGTTTA CGTCCCCGCACACTGAAAGGAGAATTGTTTGCACTGTTGTCTAAGGCAGGAAGTTGTGGG TTAAAGGTTTCAGTACTAGCCAAATCATCTGAGATTATTGATCTTAATGTTTCGAGCCCA TTAGAACTAGAGCAGTTGATATCTTTAGCTCTCTCCAGTGACATCACATTATTTGAGAAG ATTGCACCTTCTGCATATCGTCTCCGTGTTGACCCCCAAATTAAAGGGGAAGAAGATTCT ATGTCAGATAGTGATGATTCTGGAAGTGTTGATGAGGATGAGGATGCTAGCCGAAGTGAT GATGGATCTGATGGTTCCCAAAAGTTAAAATTTCTTGAGAATGAAAGCAGACTTGCTCGA AGGAAGGAGAAAAATGCACATGGAAGTCCAAATAAATGTAGTGAAATTGATGAAAGTTAT TCAGGTGAAAAATGGCTTTTGGCATTGATGGAAGGCGAGTATTCAGATCTAAGCATTGAT GAGAAGTTGGATTGTTTGGTTGCTTTAATAGATGTTGTTTCTGGTGCTGGTTCTGTTCCA AGACTTGAGGAACCGCAAAGAGTCTTGCATAATGTGCCCAGAGTGCATCCACCACAATCA GGTGGGAAAATAAAGAAATCAACTAAAAACCTTTGTCAATATAGCGATGAGTCCTTAAAT GGTTCAGGAAGTTTGGATTGTTGTCATCAAGGCCAGTCAGGAAGGCGAAAAAATCAGGAT TACACCACTGACCCTGGAAGGAACGATTTACCTATTGCTGCTCATGGACCACAAGTTGTT CTCTTAGGATCAGACCGCAGGTATAATAGCTATTGGCTCTTCCTTGGTCCTTGTAGGGAA GATGATCCAGGGCATCGTAGGGTCTACTTCGAGTCCTCAGAGGATGGTCACTGGGAGGTG ATTGATTCACCACAGGAATTACTTTCCTTGCTATCTATCCTCGATAGCAGGGGCACTAGG GAAGCACATCTCCTTACATCGATGGAGAAGAGACAAGCCTGCCTTTTTGAAGCCATGAAA AAACATGTGGAAGGAGGGAAGGCAGCCAGGCTTCCAGCCTCATCTGATTCATACTGCTCC CAGACAAGTAGTGGAGATGGAACTTCGCCCAAGACAAGTAGTGTGGATGGAGCTTCATCT GTATCAGACATTGAGAACACTTCTGTTCCTACAAGCCTCAAAGATAGTAATTTGGATTCA TCGTCTGCCGTAGTAATTGAAAGTGGGAGGGGAGGTGATGAGAAAATATCTATGTGGGAA CGGCTGCAAGCATTTGATAAATGGATCTGGACTTCTTTTTACTCCATCCTTACTGCTGTT AAAAGTGGCAAGAAGTCATTTAAGGAGTCACTACTTCGTTGTGGAAGTTGTCATGATCTA TATTGGAGAGATGAAAAGCACTGCAGAATATGCCATTCAACTTTCGAGGTTGGTTTTGAT CTTGAAGAAAAATATGCTGTACATGTGGCGACGTGCAGGGAGCCTGAACTTTCACATGAG GTACCAAATCATAAATTTCTGCCATCACAGCTACAGGCACTTAAAGCAGCCATTCATGCT ATTGAGGCCTCTATGCCTGAGGCAGCTTTTACTGGTTCTTGGATGAAGTCTGCTCACAAG CTGTGGGTTAAGCGGCTGCGACGAACGTCATCATTGCCAGAGCTTTTGCAGGTTCTTGTC GATTTTGTAGGGGCAATGGATGTTGATTGGTTGTACAAAAGTTCATCTGCGAGATTGAGA ACAAATCTGGATGACATCATTGTCGACTTTCAGACAATGCCACAAACAACATCAGCAGTT GCACTTTGGGTTGTCCAATTGGATGCCCTCATTGCGCCTTATTTGGATAATGCCATGGCA AGACAGCTGGTGAATGCTAGGTAGCTTACAAAGATGGATTCTTTTGCGTGATGCACAAGC ACCCCGAGCTGACTTCTTTTTCTGGCACCATCTGCAAGTTTTTTCTTGATGAAAGCTTTT CATCTAGGTGAGACAGAACATGGGGTCTGCTTTGAGTTCGAGAACAAGATCTTGCGACTT GCTGTAAAGCATGGAATATATTGTTCCCTCCCAGCAGAGCATTGCGTCATAGACAATGAA AAAGTTTTGTTAATAATCGTTGCTTCAGATATGTGAAAGTTTTGGCTTTCCATGTAGCGA CACAATTGGGATGTAAGCAATTTCTGAAACAGACCGCTGTTTGCAGGTGGTGCTGTTTGG GACTTGATTACCAGCTGTGCCCTTAGTTTTAACGGAGGGGTGGTTATAATTTTGT