Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034498_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:1:294676160:294684327:-1 gene:Zm00001d034498 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGCGGCCGCCGCACTGCTGCTGGGCGAGGACGGGCGCGGCTACGAGCTCGCGCGG
CGGGCCGCGCTCGCGCAGCACCTCACGTCCCCAGCAACCTGGGACGCCTTCCTCTACCCC
GCCGCCTCCCCATCGCCGCCCCCGCGCCCGCTCCTCCTCCTCCAGCTCCGCGTTCGCGCG
CTCCTCTTCGACAAGGCCTCGGCCGCGCTCCTCCTGCCCCCCCGCGGCGCGGCCCCTGTC
AGCCTCCATTCCATCAACGCCAACTATCTGCGACTTCATGGAGATGATATTTATTTCTCT
TTGGAAGATGAGCAGGAAGACAACACTCAACATCAAGTGCATTCTAGAACTGCGTTCAGT
CCAAGCAGGGATGGTTCCATGTTGTCTCAACGGCATAATCGGTATGAAGAATTGCCTGAC
ACATGGTACAAGCCATATGCTGACAAATTCAGGATATGGCACAGCAAGCTTCACTCAGGT
GACAAAGAAATACCAAAGAGAACACCAGAGGGAATGTCTGACTATCTTAAGATTTGCAGT
GTACATAAAAGGAAGAGGGCTGTGTTTATGGATGATCCCAGCATATCTGCTCCCATATTG
GAAAATGGCCCTTCCCTGCACTCAAAGAATGCTGGGGAATTCAGCAATTCAACAGACGAA
TTAATTCCAGAAATTAGATTTCCATCTGACTGTGTTCCAGAAAGCGCAATTCCTAAAACA
AGTGGGATATCTAGGGCTAACAAAATAGAAGTTCATGGAGTTCTTGATAATTTGCCAGCA
CCATCTAGCCGCAACACTGCAATGCTTGAAAGGTTTGGCATGGTGCCTGAATATTACAAG
ACAGGAAACAAATATAGAGGAAAAGATGGATCTAGAGTAGAAGGGAAATCTTTAAGCCAA
GAGCAAGCATTGCTCATGACAAAACAGTTGGTTGCTCGCTACTTGGCAAATTCAGGCTTT
GAAAGTGGAACTGTGGTCTCTATTGATGTTCTTTCAGAAATAATAATTAAGCACATATGT
AAATTGGGACGCAACTTGAAGCTTCTAACTGACAGCTACAGGAAGCAATTTTCATCAATT
GAACTCCTTAAGATGTTCCTACAAACTGTTGGGTACAGTAACATTGGATCCTTGATGGAG
ATCACAAAGATGGGGAACAGAGTGGCCAACTACCCTATTCATCAAGATGCACAAGTTCTT
CAGACACAAAATGCAATTTCCATTCATGCACAGCAGCTTCCAAGGCAGTTTCCTCCGCAA
ATGCTTCAGAATTTGACACCACAGCAACAACAGCAGCTTCAAAATTTGACACCACAACAG
CAGCAGCTTCTGCAGCAGCAGCAGTGGCTTAGGCGCAACCAGTTATGCAGCCCCCGTGGT
CCTCTTACTATGGCAGACAAGAACCAGCCTATGGTGAATGTGAAGGTAGAGAATACTATG
GATTCTCAAATCGATGTCCCATATGGGTCTTTTACTAGACAACAGCAATTTAATATAAGA
CAGCAGCAGCAACTATTGCATCAGCAGCAGCAACAGCTTCAACAGCAGCAGCTCCAGCAA
CAGCAACAACAGCTCCAGCAGCAGCAACACCAACAACAGCTTAATCAGCAGCAGCAGCAA
CTGCAGCAACAGCAGCAGCAATTGCAACAACAGCAGCAGCAGTTCACTCAGCAACAGCAA
TTGCAACAACAGCAGCAGCAACTACAGCAGATTAATCAGCAGCAGCACCTTCAACAGCAA
CAGCAACAGCAACTAAACCAGCAACAACTTCAGCAGCAACAGCAGCAGATGACCATGTCA
GGAAATCAGAATGCACAACTAGCACAGCAGTTCAAACAAGTCTCATCAATGAGTGCATAT
GGCATGCGAATGCCACCTGTCAAAGTAGAAGCTTTCCATGAATTGGTGAGCGGGGACTCG
TCGCTGAAGCACGATAACGACCCTAACAAACTCACTTCTCCAAAGTAG

Peptide Sequence

PEP ID

Zm00001d034498_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:1:294676160:294684327:-1 gene:Zm00001d034498 transcript:Zm00001d034498_T009 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAAAALLLGEDGRGYELARRAALAQHLTSPATWDAFLYPAASPSPPPRPLLLLQLRVRA
LLFDKASAALLLPPRGAAPVSLHSINANYLRLHGDDIYFSLEDEQEDNTQHQVHSRTAFS
PSRDGSMLSQRHNRYEELPDTWYKPYADKFRIWHSKLHSGDKEIPKRTPEGMSDYLKICS
VHKRKRAVFMDDPSISAPILENGPSLHSKNAGEFSNSTDELIPEIRFPSDCVPESAIPKT
SGISRANKIEVHGVLDNLPAPSSRNTAMLERFGMVPEYYKTGNKYRGKDGSRVEGKSLSQ
EQALLMTKQLVARYLANSGFESGTVVSIDVLSEIIIKHICKLGRNLKLLTDSYRKQFSSI
ELLKMFLQTVGYSNIGSLMEITKMGNRVANYPIHQDAQVLQTQNAISIHAQQLPRQFPPQ
MLQNLTPQQQQQLQNLTPQQQQLLQQQQWLRRNQLCSPRGPLTMADKNQPMVNVKVENTM
DSQIDVPYGSFTRQQQFNIRQQQQLLHQQQQQLQQQQLQQQQQQLQQQQHQQQLNQQQQQ
LQQQQQQLQQQQQQFTQQQQLQQQQQQLQQINQQQHLQQQQQQQLNQQQLQQQQQQMTMS
GNQNAQLAQQFKQVSSMSAYGMRMPPVKVEAFHELVSGDSSLKHDNDPNKLTSPK

Transcript Sequence

Transcript ID

Zm00001d034498_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:294676160:294684327:-1 gene:Zm00001d034498 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGCATCCAAGTTCCAATCACACACGAGTCCGGACGCAGAAGAACCCACCGATTTCGGCGC
GCGGACCGGTCGAACAGGCGGCCCAATCGCCACGCGGATGGCGGCGGCCGCCGCACTGCT
GCTGGGCGAGGACGGGCGCGGCTACGAGCTCGCGCGGCGGGCCGCGCTCGCGCAGCACCT
CACGTCCCCAGCAACCTGGGACGCCTTCCTCTACCCCGCCGCCTCCCCATCGCCGCCCCC
GCGCCCGCTCCTCCTCCTCCAGCTCCGCGTTCGCGCGCTCCTCTTCGACAAGGCCTCGGC
CGCGCTCCTCCTGCCCCCCCGCGGCGCGGCCCCTGTCAGCCTCCATTCCATCAACGCCAA
CTATCTGCGACTTCATGGAGATGATATTTATTTCTCTTTGGAAGATGAGCAGGAAGACAA
CACTCAACATCAAGTGCATTCTAGAACTGCGTTCAGTCCAAGCAGGGATGGTTCCATGTT
GTCTCAACGGCATAATCGGTATGAAGAATTGCCTGACACATGGTACAAGCCATATGCTGA
CAAATTCAGGATATGGCACAGCAAGCTTCACTCAGGTGACAAAGAAATACCAAAGAGAAC
ACCAGAGGGAATGTCTGACTATCTTAAGATTTGCAGTGTACATAAAAGGAAGAGGGCTGT
GTTTATGGATGATCCCAGCATATCTGCTCCCATATTGGAAAATGGCCCTTCCCTGCACTC
AAAGAATGCTGGGGAATTCAGCAATTCAACAGACGAATTAATTCCAGAAATTAGATTTCC
ATCTGACTGTGTTCCAGAAAGCGCAATTCCTAAAACAAGTGGGATATCTAGGGCTAACAA
AATAGAAGTTCATGGAGTTCTTGATAATTTGCCAGCACCATCTAGCCGCAACACTGCAAT
GCTTGAAAGGTTTGGCATGGTGCCTGAATATTACAAGACAGGAAACAAATATAGAGGAAA
AGATGGATCTAGAGTAGAAGGGAAATCTTTAAGCCAAGAGCAAGCATTGCTCATGACAAA
ACAGTTGGTTGCTCGCTACTTGGCAAATTCAGGCTTTGAAAGTGGAACTGTGGTCTCTAT
TGATGTTCTTTCAGAAATAATAATTAAGCACATATGTAAATTGGGACGCAACTTGAAGCT
TCTAACTGACAGCTACAGGAAGCAATTTTCATCAATTGAACTCCTTAAGATGTTCCTACA
AACTGTTGGGTACAGTAACATTGGATCCTTGATGGAGATCACAAAGATGGGGAACAGAGT
GGCCAACTACCCTATTCATCAAGATGCACAAGTTCTTCAGACACAAAATGCAATTTCCAT
TCATGCACAGCAGCTTCCAAGGCAGTTTCCTCCGCAAATGCTTCAGAATTTGACACCACA
GCAACAACAGCAGCTTCAAAATTTGACACCACAACAGCAGCAGCTTCTGCAGCAGCAGCA
GTGGCTTAGGCGCAACCAGTTATGCAGCCCCCGTGGTCCTCTTACTATGGCAGACAAGAA
CCAGCCTATGGTGAATGTGAAGGTAGAGAATACTATGGATTCTCAAATCGATGTCCCATA
TGGGTCTTTTACTAGACAACAGCAATTTAATATAAGACAGCAGCAGCAACTATTGCATCA
GCAGCAGCAACAGCTTCAACAGCAGCAGCTCCAGCAACAGCAACAACAGCTCCAGCAGCA
GCAACACCAACAACAGCTTAATCAGCAGCAGCAGCAACTGCAGCAACAGCAGCAGCAATT
GCAACAACAGCAGCAGCAGTTCACTCAGCAACAGCAATTGCAACAACAGCAGCAGCAACT
ACAGCAGATTAATCAGCAGCAGCACCTTCAACAGCAACAGCAACAGCAACTAAACCAGCA
ACAACTTCAGCAGCAACAGCAGCAGATGACCATGTCAGGAAATCAGAATGCACAACTAGC
ACAGCAGTTCAAACAAGTCTCATCAATGAGTGCATATGGCATGCGAATGCCACCTGTCAA
AGTAGAAGCTTTCCATGAATTGGTGAGCGGGGACTCGTCGCTGAAGCACGATAACGACCC
TAACAAACTCACTTCTCCAAAGTAGCTGCGGTGTGCAAAGGATAGCTTTTGCGGTCTGTT
GCCTTCCTGCCCCCCAACATCATGTCTCGCCTGTTTGATTGCGCACAACAGCAAGACGAA
CCGTGTATCGTAAATGTGAAGCATTTGGCTAATTCACTGCCTTCAAACAAACTGATGTCA
AATACGAACTGATAATAGCTCCAAGTTTCC