Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034496_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:294666401:294669418:1 gene:Zm00001d034496 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCACCCACTCACGCTCTCCTCCACCGCGCTCCTCCGCCTAATCAAGTCGCTCTCGCCG GCGGCGGGGCCGAGGGCCCACCTCGCGGCCGCGGAGATCCACGGCCTCCTCTTCAAGGAA GGGCTCCTCCACGCCGGGGCGCACCTCCCCACGGCGCTGCTCTCGGCCTACGCCGCGCTG GGGAGGCCGCGGCACGCGCGGGACCTGTTCGACGAGATGCCCGACCCGGGCCTCGTCTCC CGCACCGCCATGGCGCGCGCGCACGCGGCGTCCGGGCAGGCCGCCCAGGCGCTCGCCGTG TTCCGGGACATGATCGCGGACGGCGTGCTCCCGGACAACGTGGCCCTGGCGGTCGCTCTG GCCGCGTGCCACACGACAGCCTCGCTCCCTGCAGCGGGGATGGCGGCGGCAAGGAGACCT GGGAAGATGGTCCATGCCATCATCGTGACAAGCGGCATTGTGCCGGATGTGTTCGTCTCC ACCGAGCTGATCAGGGTCTACGGGGAGTACGGTGAGCTGGCGCTCTCCCGGAGGTTGTTT GATGCGATGCCGGTGAGGAGCACCGTTTCGTGGAACGCCATGGTGCATCAGTATATCAGG CATAGTAATGTTGGCGATGCTTACGAGCTGTTCCTTGCAATGCCAAGGAGGGATGTAGTG TCATGGAACACGATGATTGCCGGGTATTCCCTTGTTGGTCGATTTATGGAGGCGCTAGAG TTGTCCCGCCAGATGATATCGCCGTCGTCATGTCCAGTGTATCCAAATGGACCTACAATG AGCACTGTCCTTGCTGCTTGCGCAGGTGCCGGTTGTTTAGAGACTGGGATTTGGGTCCAT GCCTTTGTTGACAGGAACCGCATGAATGATGATGGCTCATTGGATCGGTCCTTGATAGAC ATGTACGTCAAATGTGGAAGCATCGAAAAGGCACTTCAGGTGTTCGAGAAGGCACCTGAG GCGAGGGATCTGTACTCATGGACGACCATGATTTGTGGATTGGCAATGCACGGCAGGGCT GCTGATGCTCTAAAAATGTTTGGTATGATGCAAGACAATGGCATACACCCTGATGATGTT ACTCTTGTTGGGGTCCTAAATGCTTGTGCACACTGTGGACTTGTGGACGAAGGCCTTCGA CACTTCTACTCCTTGGAGAAGTATGCAATCACACCCAAAATTGAACACTATGGATGTGTC ATTGATCTTCTTGGTCGTGTTGGGCGGCTGCAAGAAGCATACAACATTATCAGGACCATG CGCATGAAGCCTAATGCAGTAATCTGGGGTGCATTCTTGAACGCATGCAAAGTTCACAGC AACGTGGAGCTTGGCGAGATCGCAGCAGCTGAGCTCACCAGATTAATCATTCTGGAACTT GTACTAACAATTGAAGCAAGTGGAGGCATAGCACCAATTGTGTCTGTGCTGCAGCTCTGG ATGTCAGTAGACAAGAGGTGTATCAGAGAGAAGCACTTCAAGGTTAATTTGTTGAGCAAA TTGGAGATGCTGGATTTTGTATTTTGGCAGGTTGCTCATGAGTGGTGA

Peptide Sequence

PEP ID	Zm00001d034496_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:294666401:294669418:1 gene:Zm00001d034496 transcript:Zm00001d034496_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MHPLTLSSTALLRLIKSLSPAAGPRAHLAAAEIHGLLFKEGLLHAGAHLPTALLSAYAAL GRPRHARDLFDEMPDPGLVSRTAMARAHAASGQAAQALAVFRDMIADGVLPDNVALAVAL AACHTTASLPAAGMAAARRPGKMVHAIIVTSGIVPDVFVSTELIRVYGEYGELALSRRLF DAMPVRSTVSWNAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSLVGRFMEALE LSRQMISPSSCPVYPNGPTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLID MYVKCGSIEKALQVFEKAPEARDLYSWTTMICGLAMHGRAADALKMFGMMQDNGIHPDDV TLVGVLNACAHCGLVDEGLRHFYSLEKYAITPKIEHYGCVIDLLGRVGRLQEAYNIIRTM RMKPNAVIWGAFLNACKVHSNVELGEIAAAELTRLIILELVLTIEASGGIAPIVSVLQLW MSVDKRCIREKHFKVNLLSKLEMLDFVFWQVAHEW

Transcript Sequence

Transcript ID	Zm00001d034496_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:294666401:294669418:1 gene:Zm00001d034496 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCACCCACTCACGCTCTCCTCCACCGCGCTCCTCCGCCTAATCAAGTCGCTCTCGCCG GCGGCGGGGCCGAGGGCCCACCTCGCGGCCGCGGAGATCCACGGCCTCCTCTTCAAGGAA GGGCTCCTCCACGCCGGGGCGCACCTCCCCACGGCGCTGCTCTCGGCCTACGCCGCGCTG GGGAGGCCGCGGCACGCGCGGGACCTGTTCGACGAGATGCCCGACCCGGGCCTCGTCTCC CGCACCGCCATGGCGCGCGCGCACGCGGCGTCCGGGCAGGCCGCCCAGGCGCTCGCCGTG TTCCGGGACATGATCGCGGACGGCGTGCTCCCGGACAACGTGGCCCTGGCGGTCGCTCTG GCCGCGTGCCACACGACAGCCTCGCTCCCTGCAGCGGGGATGGCGGCGGCAAGGAGACCT GGGAAGATGGTCCATGCCATCATCGTGACAAGCGGCATTGTGCCGGATGTGTTCGTCTCC ACCGAGCTGATCAGGGTCTACGGGGAGTACGGTGAGCTGGCGCTCTCCCGGAGGTTGTTT GATGCGATGCCGGTGAGGAGCACCGTTTCGTGGAACGCCATGGTGCATCAGTATATCAGG CATAGTAATGTTGGCGATGCTTACGAGCTGTTCCTTGCAATGCCAAGGAGGGATGTAGTG TCATGGAACACGATGATTGCCGGGTATTCCCTTGTTGGTCGATTTATGGAGGCGCTAGAG TTGTCCCGCCAGATGATATCGCCGTCGTCATGTCCAGTGTATCCAAATGGACCTACAATG AGCACTGTCCTTGCTGCTTGCGCAGGTGCCGGTTGTTTAGAGACTGGGATTTGGGTCCAT GCCTTTGTTGACAGGAACCGCATGAATGATGATGGCTCATTGGATCGGTCCTTGATAGAC ATGTACGTCAAATGTGGAAGCATCGAAAAGGCACTTCAGGTGTTCGAGAAGGCACCTGAG GCGAGGGATCTGTACTCATGGACGACCATGATTTGTGGATTGGCAATGCACGGCAGGGCT GCTGATGCTCTAAAAATGTTTGGTATGATGCAAGACAATGGCATACACCCTGATGATGTT ACTCTTGTTGGGGTCCTAAATGCTTGTGCACACTGTGGACTTGTGGACGAAGGCCTTCGA CACTTCTACTCCTTGGAGAAGTATGCAATCACACCCAAAATTGAACACTATGGATGTGTC ATTGATCTTCTTGGTCGTGTTGGGCGGCTGCAAGAAGCATACAACATTATCAGGACCATG CGCATGAAGCCTAATGCAGTAATCTGGGGTGCATTCTTGAACGCATGCAAAGTTCACAGC AACGTGGAGCTTGGCGAGATCGCAGCAGCTGAGCTCACCAGATTAATCATTCTGGAACTT GTACTAACAATTGAAGCAAGTGGAGGCATAGCACCAATTGTGTCTGTGCTGCAGCTCTGG ATGTCAGTAGACAAGAGGTGTATCAGAGAGAAGCACTTCAAGGTTAATTTGTTGAGCAAA TTGGAGATGCTGGATTTTGTATTTTGGCAGGTTGCTCATGAGTGGTGAATGGTCTGACGA CTTCAGAAGAGGATAGATCTGAGATTACCTTTCATGCATGTTAAGGAAGTTAAGTAGTTG ATGCCTTCAAATAAATGGAGAAACGTCAGGTGAACCGCGAGCAGAATTCTGTGGCGCATT TGTTAGCGCAGTTAGCTAGGACTCTGTTCATACAGCTGTTCGATTAAGCCAAATACCTAA CTGTATTGCCCATCTAGTAGAACCTAACTGTAACTTGTCCTCTTAATTAATACTAGCAAT TAGCAAACATGTCTGTACGTTGCGATCGGAGAAAAAAAACTATCAAATATTTAGGAGAAC AATGACACGAGTGATACATAGCATTATTTATGTTTCACCATTTATGGAATTTAAAGACTA ATTCGTTTTG