Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034486_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:294250132:294254406:1 gene:Zm00001d034486 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small GTP-binding protein domain

Sequence

ATGCACAGCGGGTTCGCCGGGGAGACGCTCAGGATACCCGTGCCTGTAGGAACTGTTGTG
AAACGCAAGAAGGGGGCTGTTCTGGCGGATTTGGCTCATCACTGTGATGAAGTGCTCGTT
GCTAGAGGTGGACAGGGCGGAATCAGCTTGATTGATGTGCCTGAGTACAAGAGGAGGAAA
GCCATGGCTTTATCCCCAAACATCATGCGAGATACTAGTGACAAAGTATTAACGCATGGT
CAACCTGGTGAGGAAGTAAGCTTGGAGTTGATCTTAAGGGTAGTTGCTGATGTTGGCCTT
GTGGGACTTCCAAATGCTGGAAAGTCAACACTTCTATCAGCTATAACACTTGCAAGACCA
GACATTGCTGATTATCCATTCACTACATTAATGCCCAATCTTGGCCGACTTGGTGGAGAT
CCTGCTTTAGGGGCGTTACAGTTTTCCTCAGAAGCAACATTGGCAGATTTGCCAGGTCTA
ATTGAGGGCGCTCATCTAGGAAAGGGCCTTGGCCGCAATTTCTTAAGACATTTAAGGAGA
ACTAGAGTAATCGTCCATGTTGTCGATGCTGCTGCAGATGACCCTGTCAATGATTATAAG
ATTGTTAGAGAAGTACTAATTTCTAATTGCTTTCATCACTCTCATGTGCTTCAAGGTGCA
GTTTTGAACAGTGATCTGACATGTAGCTCTTTGCAGGAATTAAGGATGTATAACCCCCAA
TACCTGGAGCGACCTTATGTTGTGGTCCTCAACAAAATTGATCTTCCTAAGGCCCAAGAT
AGACTATCTGCACTGGTCTTAGAGATATCTTCAATTGGATGTGAAGAAGGGCATGAGCAA
AGTGGCAGCAAAGATAACCTAAATGGACGAGTAAGTGATCATCAGGTCTTATCAGAGGCT
AAAGCTGAAGGTGTTGAAAAGGAGCTCGGGGACTATCCAAGACCTGAAGCTGTCGTGGCT
GCTAGCGTATTGAGGCATATCGGGATCGACGAGATGCTGAAGGAGATAAGGGCAGCCCTG
AGAAAATGCTTTGATCACAAGTTACCAGAACATTGA

Peptide Sequence

PEP ID

Zm00001d034486_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:294250132:294254406:1 gene:Zm00001d034486 transcript:Zm00001d034486_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small GTP-binding protein domain

Sequence

MHSGFAGETLRIPVPVGTVVKRKKGAVLADLAHHCDEVLVARGGQGGISLIDVPEYKRRK
AMALSPNIMRDTSDKVLTHGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLSAITLARP
DIADYPFTTLMPNLGRLGGDPALGALQFSSEATLADLPGLIEGAHLGKGLGRNFLRHLRR
TRVIVHVVDAAADDPVNDYKIVREVLISNCFHHSHVLQGAVLNSDLTCSSLQELRMYNPQ
YLERPYVVVLNKIDLPKAQDRLSALVLEISSIGCEEGHEQSGSKDNLNGRVSDHQVLSEA
KAEGVEKELGDYPRPEAVVAASVLRHIGIDEMLKEIRAALRKCFDHKLPEH

Transcript Sequence

Transcript ID

Zm00001d034486_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:294250132:294254406:1 gene:Zm00001d034486 gene_biotype:protein_coding transcript_biotype:protein_coding description:Small GTP-binding protein domain

Sequence

TCCGTGGCGCTGCCGACGGGCGGGCACGGCGGCGACGTTGTGGTGTACGCCGACGAGGCC
GAGGAGACGCTGCTGCGGTTCCACGAGAAGGCGCGGTACTGCGCCAAACGGGGAGGGAAC
GTGGGCGCCGCTGGCGGCACGCTCAGCTCGCGGATGCACAGCGGGTTCGCCGGGGAGACG
CTCAGGATACCCGTGCCTGTAGGAACTGTTGTGAAACGCAAGAAGGGGGCTGTTCTGGCG
GATTTGGCTCATCACTGTGATGAAGTGCTCGTTGCTAGAGGTGGACAGGGCGGAATCAGC
TTGATTGATGTGCCTGAGTACAAGAGGAGGAAAGCCATGGCTTTATCCCCAAACATCATG
CGAGATACTAGTGACAAAGTATTAACGCATGGTCAACCTGGTGAGGAAGTAAGCTTGGAG
TTGATCTTAAGGGTAGTTGCTGATGTTGGCCTTGTGGGACTTCCAAATGCTGGAAAGTCA
ACACTTCTATCAGCTATAACACTTGCAAGACCAGACATTGCTGATTATCCATTCACTACA
TTAATGCCCAATCTTGGCCGACTTGGTGGAGATCCTGCTTTAGGGGCGTTACAGTTTTCC
TCAGAAGCAACATTGGCAGATTTGCCAGGTCTAATTGAGGGCGCTCATCTAGGAAAGGGC
CTTGGCCGCAATTTCTTAAGACATTTAAGGAGAACTAGAGTAATCGTCCATGTTGTCGAT
GCTGCTGCAGATGACCCTGTCAATGATTATAAGATTGTTAGAGAAGTACTAATTTCTAAT
TGCTTTCATCACTCTCATGTGCTTCAAGGTGCAGTTTTGAACAGTGATCTGACATGTAGC
TCTTTGCAGGAATTAAGGATGTATAACCCCCAATACCTGGAGCGACCTTATGTTGTGGTC
CTCAACAAAATTGATCTTCCTAAGGCCCAAGATAGACTATCTGCACTGGTCTTAGAGATA
TCTTCAATTGGATGTGAAGAAGGGCATGAGCAAAGTGGCAGCAAAGATAACCTAAATGGA
CGAGTAAGTGATCATCAGGTCTTATCAGAGGCTAAAGCTGAAGGTGTTGAAAAGGAGCTC
GGGGACTATCCAAGACCTGAAGCTGTCGTGGCTGCTAGCGTATTGAGGCATATCGGGATC
GACGAGATGCTGAAGGAGATAAGGGCAGCCCTGAGAAAATGCTTTGATCACAAGTTACCA
GAACATTGAGCAAAGTAAGTTAGCATAAATATAGGCTAAATAGTACCATAGTCCAGTTCC
AGTAGCAGAAAAGGGAATGAACTGGATGCCCCCCTGGCACATACTGAAGAATCCCCAACG
GCAGTTAAATCCATGGAGAGTTTTCTGAAGCAACGGCACCAGCGGTTTCTGAAGGGTGAA
AACACTAATGCTGGAGCACAGCGGTTTTTCAGGCGTCGTTTGTAACACGGGTTCTCCAGT
GAAATTTCTGCGAAAATTGAATTTGTTGTCGTCCACAGCTGCCGTTTGTAGGTGACAGTA
CAACGTATGTGAATAGATTAGTTTGAGTTATGTCGGCGCTGTCATTGTATCATTCGTCTC
CAATCTGCGCAGATTTGCAGTGTAGCATTCATCTCTTGTCTGCACAGATGCACGATGCGG
CATTTGTCTTCTGTGGTTTCAGTCCTGTGTACTACAAGAAATACACTTTGATGGAACTAT
CGCTTTGTGACAACAATTTCATTT