Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034452_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:1:293403330:293408269:-1 gene:Zm00001d034452 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tryptophan synthase alpha chain chloroplastic
Sequence	ATGGCCAACCGCGGCGCTGCGGCCGGCAAGCTCACCGTCGCCGAGACATTCTCCAACCTC AGGGAGCAAGGCAAGAGTGCATTCATCCCGTTCATCACTGCTGGTGATCCTGACCTGGCA ACCACATCAAAAGCATTGAAGATTCTCAATTCCTGCGGTTCGGATGTTATAGAGGTTGGC GTACCATACTCGGATCCACTGGCTGATGGACCAGTTATTCAGGCTTCTGCAACACGGGCG CTTAAGAAAGGCACTACACTCGATTCTGTCATAGAAATGCTGAAGGGGGTTACACCTGAG CTTTCTTGCCCCATTGTTCTTTTCACATACTATAATCCAATTCTGAAACGTGGTGTGGGA AACTTCATGTCTTTTATCAAACAAGCTGGCATACATGGACTTGTAGTGCCTGATCTTCCC TTGGAGGAGACAGCGTTGCTGAGGAGCGAGGCCATTATGCACAACATAGAGCTGGTGCTG CTTACAACGCCAACCACGCCAACAGATCGGATGAAGGGAATTGCACAAGCTTCAGAAGGA TTTCTCTATCTTGTGAGCGCTGTAGGGGTTACAGGTGCACGCTCAAATGTAAACTTACGT GTAGAACACCTTCTTAGGGAGATCAAGAAGGTATATTTTTTGGTGTCTATGACATGTGGG GCCAGTGGCATACAAATGGTTATCTTCCTGGCTTTACAGGTTACAGACAAACCGGTAGCT GTTGGTTTCGGTGTATCGACTCCAGAGCATGTGAAACAGATCGTGGGCTGGGGAGCGGAC GGTGTGATTGTTGGCAGTGCGATTGTGAGGCAGTTGTGTGAGGCTGCTACTCCTGAAGAG GGTCTGGAAAGGCTCGAGGAGTACGCCAGGAGTATGAAGGCTGCTATGCCGTGA

Peptide Sequence

PEP ID	Zm00001d034452_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:1:293403330:293408269:-1 gene:Zm00001d034452 transcript:Zm00001d034452_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tryptophan synthase alpha chain chloroplastic
Sequence	MANRGAAAGKLTVAETFSNLREQGKSAFIPFITAGDPDLATTSKALKILNSCGSDVIEVG VPYSDPLADGPVIQASATRALKKGTTLDSVIEMLKGVTPELSCPIVLFTYYNPILKRGVG NFMSFIKQAGIHGLVVPDLPLEETALLRSEAIMHNIELVLLTTPTTPTDRMKGIAQASEG FLYLVSAVGVTGARSNVNLRVEHLLREIKKVYFLVSMTCGASGIQMVIFLALQVTDKPVA VGFGVSTPEHVKQIVGWGADGVIVGSAIVRQLCEAATPEEGLERLEEYARSMKAAMP

Transcript Sequence

Transcript ID	Zm00001d034452_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:293403330:293408269:-1 gene:Zm00001d034452 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tryptophan synthase alpha chain chloroplastic
Sequence	GAACGCGACACTCGCAAAGTCGCAAGCGGGTCGCAATCAAGGCTGCTCCCCTCTATCTCC GTGTTCGCCCCTCGGTTCACCACCCGCCGCCGCCGAGACCTCCTCCTCGCCGGCTACTCC TGACCCCATAAAGGCAGCGCTCGGAGGTGGCCCTCTGTCGGGTGGAGTGGTGGACACATC CGCGCCCATGGCCAACCGCGGCGCTGCGGCCGGCAAGCTCACCGTCGCCGAGACATTCTC CAACCTCAGGGAGCAAGGCAAGAGTGCATTCATCCCGTTCATCACTGCTGGTGATCCTGA CCTGGCAACCACATCAAAAGCATTGAAGATTCTCAATTCCTGCGGTTCGGATGTTATAGA GGTTGGCGTACCATACTCGGATCCACTGGCTGATGGACCAGTTATTCAGGCTTCTGCAAC ACGGGCGCTTAAGAAAGGCACTACACTCGATTCTGTCATAGAAATGCTGAAGGGGGTTAC ACCTGAGCTTTCTTGCCCCATTGTTCTTTTCACATACTATAATCCAATTCTGAAACGTGG TGTGGGAAACTTCATGTCTTTTATCAAACAAGCTGGCATACATGGACTTGTAGTGCCTGA TCTTCCCTTGGAGGAGACAGCGTTGCTGAGGAGCGAGGCCATTATGCACAACATAGAGCT GGTGCTGCTTACAACGCCAACCACGCCAACAGATCGGATGAAGGGAATTGCACAAGCTTC AGAAGGATTTCTCTATCTTGTGAGCGCTGTAGGGGTTACAGGTGCACGCTCAAATGTAAA CTTACGTGTAGAACACCTTCTTAGGGAGATCAAGAAGGTATATTTTTTGGTGTCTATGAC ATGTGGGGCCAGTGGCATACAAATGGTTATCTTCCTGGCTTTACAGGTTACAGACAAACC GGTAGCTGTTGGTTTCGGTGTATCGACTCCAGAGCATGTGAAACAGATCGTGGGCTGGGG AGCGGACGGTGTGATTGTTGGCAGTGCGATTGTGAGGCAGTTGTGTGAGGCTGCTACTCC TGAAGAGGGTCTGGAAAGGCTCGAGGAGTACGCCAGGAGTATGAAGGCTGCTATGCCGTG AGCTGATCTCACTCCCCGTCACAGGCAAGGTAAATAGAACATGGTTTTAGCAATATTCTG GGCATGGGTTTGGCATCCAGAACTCATCTTAGTGCTGTACGGGTCGTTCTCGGGTGGTGA GAACGAAGTCTGGCTTTGCCTATAATAGAAAAGGGTTAAACTGAGTTAGTGCGACATTTT GATGGAAAAGCGAGTGATTGCGAGATATCAGTTCATGC