Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034409_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:292162214:292166452:1 gene:Zm00001d034409 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ATGCGAGGCATCGGCGCCGCCGCCGCCGCCAGGCGGCACACTCCATTCCTCTCCTCCCGC GCTCTCGCCTTCTCCTCCTCTTCTAGAAGCGGGGGCGGTGATGGCGGTTTCGGGCACGGG CGCGGACGCGGCCTGCCGACCGCCGGGCAGCCGCGCGCTCCCGGGAGGCCCATTTCCAAC GACGATGACGCGGATCCCTTCTCTGCCACAGCACCCGTCGGCCGTGGTCGCGGGGAGCCT GAGGTTCCCTCCTCCCCAGGCATCCCGTCCTTCGCTGTGTTCTCTGGCGTCGGTCGCGGC CGCGGCCGCGGATCCCCACTGCCCCCACCGCCACCCCCTGAGGACGCTTCAAAGCAGCCG ACCTTCACCAAGGGCTTCGACAACGCTCCTCAGCGCTCCTATCCGGAGCCGCCGAGCCTC GATGCTTCCTCCTCCGCGCCGCCGCTGCCCCGCCCGCTCCCGATCTCCGGCGCCGGCCGC GGGGTCCCCTGGACGCAGCAGCCTTCGCCGGATAAGCCTCCGGAAGAGAACAGGTTCATC CGGCGCCGCGAGGCGGTGAAACAGTCTGCCGCCGAGCCGCCGAAACAGGCTCCCGGGGCG CAGCAACCGAAGTTGTCGCCACAAGAAGCTGTGAGACGGGCGGTTGAACTCCTGGGCGGC GGGGGCCGCAGCGGCGAAGATGGCGGAGGGCGTGGTGGTGGGGGTCGCCTCTCCCGTGGC CGTGGCCGTGGCACAGGCCGCGGCAGGCGTCCCGGGCGTGGCGACCGCTCTGATGATGTG GAAGACGTCTGGCAAGCGAGCTACTTGGGGGACAAAGCTGATGGCGATAGGCTAGAGCAG CAGCTCGGCGAGGACAAGATGAAGATTCTGGAGCAGGCGTTCATGGAGGCAGCAGATAAT GCGTTGCCACATCCAATGGAAGATGCTTACCTCGAGGCTTGTCACACAAACAACATGATC GAGTTTGAGCCGGAGTACCATGTGAATTTTGGTAATCCTGATATTGATGAGAAACCACCA ATGTCGTTGGAGGAGATGCTTCAGAAGGTGAAGCCATTTGTAGTTGCATATGAGGGCATC CAGAACCAGGAAGAATGGGAGGAAGCTGTGAAAGATGTAATGGCTAGAGCCCCCCATATG AAAGAGCTCATAGATATGTACAGTGGACCTGATGTTGTGACTGCAAAACAACAAGAAGAG GAGTTGCAAAGAGTTGCAAACACTCTTCCAGAAAGCATCCCTTCTTCAGTAAAGCGGTTT ACTGACAAAACTCTACTCTCTCTTAAGAACAATCCTGGCTGGGGTTTTGACAAGAAATGC CAATTCATGGACAAGTACGCTCGCATAGTTTCAGAGCAATACAAGTAG

Peptide Sequence

PEP ID	Zm00001d034409_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:292162214:292166452:1 gene:Zm00001d034409 transcript:Zm00001d034409_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	MRGIGAAAAARRHTPFLSSRALAFSSSSRSGGGDGGFGHGRGRGLPTAGQPRAPGRPISN DDDADPFSATAPVGRGRGEPEVPSSPGIPSFAVFSGVGRGRGRGSPLPPPPPPEDASKQP TFTKGFDNAPQRSYPEPPSLDASSSAPPLPRPLPISGAGRGVPWTQQPSPDKPPEENRFI RRREAVKQSAAEPPKQAPGAQQPKLSPQEAVRRAVELLGGGGRSGEDGGGRGGGGRLSRG RGRGTGRGRRPGRGDRSDDVEDVWQASYLGDKADGDRLEQQLGEDKMKILEQAFMEAADN ALPHPMEDAYLEACHTNNMIEFEPEYHVNFGNPDIDEKPPMSLEEMLQKVKPFVVAYEGI QNQEEWEEAVKDVMARAPHMKELIDMYSGPDVVTAKQQEEELQRVANTLPESIPSSVKRF TDKTLLSLKNNPGWGFDKKCQFMDKYARIVSEQYK

Transcript Sequence

Transcript ID	Zm00001d034409_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:292162214:292166452:1 gene:Zm00001d034409 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	GAGCCCAACCCTAGCAGCACCCCGCGCTGAACCCATCACCGTCAGGCCATCACCATGCGA GGCATCGGCGCCGCCGCCGCCGCCAGGCGGCACACTCCATTCCTCTCCTCCCGCGCTCTC GCCTTCTCCTCCTCTTCTAGAAGCGGGGGCGGTGATGGCGGTTTCGGGCACGGGCGCGGA CGCGGCCTGCCGACCGCCGGGCAGCCGCGCGCTCCCGGGAGGCCCATTTCCAACGACGAT GACGCGGATCCCTTCTCTGCCACAGCACCCGTCGGCCGTGGTCGCGGGGAGCCTGAGGTT CCCTCCTCCCCAGGCATCCCGTCCTTCGCTGTGTTCTCTGGCGTCGGTCGCGGCCGCGGC CGCGGATCCCCACTGCCCCCACCGCCACCCCCTGAGGACGCTTCAAAGCAGCCGACCTTC ACCAAGGGCTTCGACAACGCTCCTCAGCGCTCCTATCCGGAGCCGCCGAGCCTCGATGCT TCCTCCTCCGCGCCGCCGCTGCCCCGCCCGCTCCCGATCTCCGGCGCCGGCCGCGGGGTC CCCTGGACGCAGCAGCCTTCGCCGGATAAGCCTCCGGAAGAGAACAGGTTCATCCGGCGC CGCGAGGCGGTGAAACAGTCTGCCGCCGAGCCGCCGAAACAGGCTCCCGGGGCGCAGCAA CCGAAGTTGTCGCCACAAGAAGCTGTGAGACGGGCGGTTGAACTCCTGGGCGGCGGGGGC CGCAGCGGCGAAGATGGCGGAGGGCGTGGTGGTGGGGGTCGCCTCTCCCGTGGCCGTGGC CGTGGCACAGGCCGCGGCAGGCGTCCCGGGCGTGGCGACCGCTCTGATGATGTGGAAGAC GTCTGGCAAGCGAGCTACTTGGGGGACAAAGCTGATGGCGATAGGCTAGAGCAGCAGCTC GGCGAGGACAAGATGAAGATTCTGGAGCAGGCGTTCATGGAGGCAGCAGATAATGCGTTG CCACATCCAATGGAAGATGCTTACCTCGAGGCTTGTCACACAAACAACATGATCGAGTTT GAGCCGGAGTACCATGTGAATTTTGGTAATCCTGATATTGATGAGAAACCACCAATGTCG TTGGAGGAGATGCTTCAGAAGGTGAAGCCATTTGTAGTTGCATATGAGGGCATCCAGAAC CAGGAAGAATGGGAGGAAGCTGTGAAAGATGTAATGGCTAGAGCCCCCCATATGAAAGAG CTCATAGATATGTACAGTGGACCTGATGTTGTGACTGCAAAACAACAAGAAGAGGAGTTG CAAAGAGTTGCAAACACTCTTCCAGAAAGCATCCCTTCTTCAGTAAAGCGGTTTACTGAC AAAACTCTACTCTCTCTTAAGAACAATCCTGGCTGGGGTTTTGACAAGAAATGCCAATTC ATGGACAAGTACGCTCGCATAGTTTCAGAGCAATACAAGTAGAAAGGCATCTTATACCCT GTTGTAGTAACCATATTATTTGTCCTCCAAGGAGACAAGTACGCTTTGTTTTGAGAGAAG GTGAGATGCCCATATCTAATCCGTGCAATGTTTTTTTATTTATTTCACTGAGATGCTAGT TTGATAAATAAAATTGGTGACAAACATGTTTCTTTTTTTCATCATATGAAGCACCAATTC CTTGCT