Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034370_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:1:291065537:291072677:1 gene:Zm00001d034370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTCATCATGTGCACGCTCAAGATTCCTAAAACCATCATTAAGGAAATTGATATTTTC
AGAAAGCACTGCCTGTGGAGAGGAAATGACATCAACTCCAAGAGGCCACCTTTGATTGCT
TGGAATTCGGTCACTCAAAGGAAAGTGAATGGTGGCCTGGGTGTTCTTCGATTAGAAACA
CAGAACGAGGCTCTTCTAATTAAATTTTTGCATAAATTTTTCAACCACAGCGACTTACCT
TGGGTCCATCTGATCTGGAACAATTACTATCTTACTCGAGGTCTCCCTGGTAATAGAAGC
GTTGGATCTTTCTGGTGGAAGAGCATTGTAAAGCTTCTGCCAAACTTCAAAGGACTGGCT
ACCCCCGTCATTGGCAATGGCAGATTAATTTCATTCTGGGATGATCAGTGGAGTCAGGGC
ATCCCGAGGCATATTTTCCCAGAGCTCTTCTCCTTTGCCAAGAACTCAAAAATGACCATC
AAAGAGGTCAAGGATCAAGAGCAGTTCCATGATCTTTTTCATTTACCTGTCTCTGATCAA
GCGTTTGATCAATTTCTGGTACTCAAGGGGTCTTGGGAGCAAATTATTCTTAATAATGTT
CATGACCGCTGGAAGTATATTTGGGGATCGGACAAATTCTCGTCCCAAAAAGCTTACAGA
TCTTTCATGGGCCAGATGCAGACTCATCCTATCTACAAACTAGTTTGGAAAAGTAAGTGT
CAGCCTAAGCATAGAGTCTTCTATTGGCTGTGGCTTAAGAACAGGCTAAACACCAGAAAT
ATGCTGAGAAGGAGAAACATGGAGCTAGATTCCTATTCTTGCGAAAACTGTCTTTGGCAA
AGAGAGGAGACCCTTTATCATCTTTTCCTCAGATGCAACTTCGCGAAAGCCTGCTGGAAC
TCAATTGGCATTACCCCACCCAGAATTTCCAACCCTGAAGAGGCATCTGTAAACCTCAAA
CACCAGCTCAACGTTCCCTTCTCTATGGAGATCACTATTCTTATGACTTGGAGCATCTGG
AAAAGCCGAAACGAGTGGCTGTTTTCAAACAGAGATCCCTCCGTGCTCCGCTGCACTCAG
GAATTTAGTAGAGAATTGCGACTAATCATTCACAGAGCACGGGGAGAATTCGACACCTCA
ATCCCGAACTGGCTAAATTTGTGGCAAATATAG

Peptide Sequence

PEP ID

Zm00001d034370_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:1:291065537:291072677:1 gene:Zm00001d034370 transcript:Zm00001d034370_T005 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFIMCTLKIPKTIIKEIDIFRKHCLWRGNDINSKRPPLIAWNSVTQRKVNGGLGVLRLET
QNEALLIKFLHKFFNHSDLPWVHLIWNNYYLTRGLPGNRSVGSFWWKSIVKLLPNFKGLA
TPVIGNGRLISFWDDQWSQGIPRHIFPELFSFAKNSKMTIKEVKDQEQFHDLFHLPVSDQ
AFDQFLVLKGSWEQIILNNVHDRWKYIWGSDKFSSQKAYRSFMGQMQTHPIYKLVWKSKC
QPKHRVFYWLWLKNRLNTRNMLRRRNMELDSYSCENCLWQREETLYHLFLRCNFAKACWN
SIGITPPRISNPEEASVNLKHQLNVPFSMEITILMTWSIWKSRNEWLFSNRDPSVLRCTQ
EFSRELRLIIHRARGEFDTSIPNWLNLWQI

Transcript Sequence

Transcript ID

Zm00001d034370_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:291065537:291072677:1 gene:Zm00001d034370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCTGCTATTCTGCTCGACGGCTCAGCTCTAGCCTCCACTCCAGGCACCGGAGTCCGAGA
GCCCGCCTACAGTGATGGCGCCCAAGCACCTCAACCTCTTCGCCGCGGCGCTGCTCCTCC
TCCTCCTCCCCTCCGGCTCCAGCGCCACCGCCGTCGAGTACTGCAAAAAGGGGTGGGACT
ACCCAGTGAAGGTGAGCAGCGTGGAGGTCGTCCCCGATCCCGTCGTCAGGGGACAGCCGG
CCACCTTCAAGATTTCCGCCTCCACAGATAAAAACATCACTAAAGGGAAACTAACGATAG
ATGTTGCATACTTCATCTTCCACGTCCACTCGGAAACTCATAACCTCTGTGATGAGACTT
CTTGCCCAGTAACAGGTGAATTTGTGCTAGCTAGCCAACAGACATTACCATCGTTCACCC
CGCCAGGTTCCTACACCCTCACGATGAAGTTGCTGGGGGACAGCAACGAGGAACTGACCT
GCATCTCTTTCGGGTTCAGCATCGGGTTTGTTGCGCCGAATCCCGTCATCTGAACCCAGT
ATCGAATGTCATGGATGTACTTTACATGAACCTTGTAGTGCAACATTCTCCAGTAAGACT
CGGAACTCCCAGGCTGGGCGCCTGGAATTGGTTAATTCGGTCTTCTCAGCCTTACCAATG
TTCATCATGTGCACGCTCAAGATTCCTAAAACCATCATTAAGGAAATTGATATTTTCAGA
AAGCACTGCCTGTGGAGAGGAAATGACATCAACTCCAAGAGGCCACCTTTGATTGCTTGG
AATTCGGTCACTCAAAGGAAAGTGAATGGTGGCCTGGGTGTTCTTCGATTAGAAACACAG
AACGAGGCTCTTCTAATTAAATTTTTGCATAAATTTTTCAACCACAGCGACTTACCTTGG
GTCCATCTGATCTGGAACAATTACTATCTTACTCGAGGTCTCCCTGGTAATAGAAGCGTT
GGATCTTTCTGGTGGAAGAGCATTGTAAAGCTTCTGCCAAACTTCAAAGGACTGGCTACC
CCCGTCATTGGCAATGGCAGATTAATTTCATTCTGGGATGATCAGTGGAGTCAGGGCATC
CCGAGGCATATTTTCCCAGAGCTCTTCTCCTTTGCCAAGAACTCAAAAATGACCATCAAA
GAGGTCAAGGATCAAGAGCAGTTCCATGATCTTTTTCATTTACCTGTCTCTGATCAAGCG
TTTGATCAATTTCTGGTACTCAAGGGGTCTTGGGAGCAAATTATTCTTAATAATGTTCAT
GACCGCTGGAAGTATATTTGGGGATCGGACAAATTCTCGTCCCAAAAAGCTTACAGATCT
TTCATGGGCCAGATGCAGACTCATCCTATCTACAAACTAGTTTGGAAAAGTAAGTGTCAG
CCTAAGCATAGAGTCTTCTATTGGCTGTGGCTTAAGAACAGGCTAAACACCAGAAATATG
CTGAGAAGGAGAAACATGGAGCTAGATTCCTATTCTTGCGAAAACTGTCTTTGGCAAAGA
GAGGAGACCCTTTATCATCTTTTCCTCAGATGCAACTTCGCGAAAGCCTGCTGGAACTCA
ATTGGCATTACCCCACCCAGAATTTCCAACCCTGAAGAGGCATCTGTAAACCTCAAACAC
CAGCTCAACGTTCCCTTCTCTATGGAGATCACTATTCTTATGACTTGGAGCATCTGGAAA
AGCCGAAACGAGTGGCTGTTTTCAAACAGAGATCCCTCCGTGCTCCGCTGCACTCAGGAA
TTTAGTAGAGAATTGCGACTAATCATTCACAGAGCACGGGGAGAATTCGACACCTCAATC
CCGAACTGGCTAAATTTGTGGCAAATATAGAAATAGCTCTTCTTTTTTCTTTCTTTCTCT
CTTCTTTTTATTGATTGTAAAAGGAACAGGGCCTAACCTTTAATATTCGCTTTCTAATAA
AATGCGCAGTAGGGGTTTCCCCCTCCTGATCCTTCAAAAAAAAAGTAAGACTCGGAACGT
GTGACCAACTGCTGTCTTGCATTCGGAGTTGGGCGCCTGACCTAACGATCTTAACTGCAT
ACAGTTTTATCATGGACCTACCAGAGTTTGGTGCTCCGTGCTCCATGTCAGCATGCCTTT
TACATGTATATAAGACTATGTACAACGGCTCCCACGGGCATCCCTCTCCCCTTGATTTAG
CGGCTGCAGTGACACCTCTATTGCTTCACTAGTCCCCGTACGCCGGTTTGGATGGTTTCG
ATGCAGCAGCTGCCTTCTCTCCAATGGGGAATCTAGGATTTCAAGTTAAGTTAGGGTGGT
CTATCTTATGAAAATCAAAATAAATAAATTAGATTGTATTTTAAGTTCTACAACATATCT
CTACTACTACTTAAGTTACTAGTGTAGACGTCCACATTTTGTTTGGCGCACGGTTCTGCC
GGCGCCCCCCGCTCTCCTCTCTCGCGCCCCGCTCTCTCGCCCGCCATCATGGAAGGAGAA
TTTGGAAGGTCCGCATGGTTCCATAGAACTCTCCTCTCTGCTGTCTCTCTCGCCCACCAT
TTGCGCGCTCTCTGGCTGCCATCTCCGTGCCTCGCTCTCCTCTCTGCTCGCCGCCAGACC
CAGCGCGATCCACTCGTCAAAATCTTCTGCGCGATGCACCGCTCCCCCCTCCACCTTCGC
TCCATGGCGTGATGCAGGCTGGTACGTGGCCAGCATCCTGCAATCCCCACGCTCTGGATC
TGGGAACGAGCAATCAGCGCCTCCATCCGCAATCAGCGTCTTCCCGCAGCCGCAGCCTTC
GCCTCCACTCGCCCCGATGCCCCCTGCCCTCGCAATCAGCACCTTCGCCTCCATAAGATT
GGACCAAAATCTAACATGGAGAGCGGAATCCCCACTGCAATCAGCATTCGCTTCCACTCG
CCCCGACGCCCCCGCGCCCGTCTTCCCCCAGCTGCAGCCTTCGCCTCGACAGAGGACGCA
CGGCCGCTATGCCCGCCCTGCTCGCGGTGACCCCCTCCCTCCCCCCGATAGTCATCGCCG
CACCCAGATCCATTTTCCCCAACCCTCCACGCCCTTCTCCAAGAAACAGAGCAACGATAG
TCGTGTCGACGAGATCGACCCAGTAGCAGGATCGATCTGCGGGAGAGGTTCTTGCGGAGC
TCGATGGCATTGTTGGTGGCGCTGCTCATGGCGCTCATCCAGGAGGCGAGCGACTCCTAC
AGGGCACGGAGGCGCTGGCTGTTGAGGTAGAGCAGGAGCAGCGCGTCCAGGATCTGCACG
GGGTCCTGCTCGAACTGCACAACGGGGGAGAAGCGGTGCATCTCGATCTTCACCTTCTCG
CGCTCCACGGTGAGCTTCCCCTCCCTGGTGGTGAGGCGAAAGAGCTCGTCCTCGGTGGCG
TCCACGTAGACGGCGACGTTGGCAGCTCCGCGAGGATGGCCGCCGCGGCGGGGGAGGAGG
CGCAGTCTAGCGCCACCAAGCAGAAGGTGGCGGCGGCAAAGCAGTACATCGAGAACCACT
ACAAGTCGCAGATGAAGTCGCTTCAGGAGCTCAAGGAGAGGTCAGTCAAGTCCACTCCAC
TCCACTTTCCTTCCTGGTGTGATGGCAATGCGCGTGTGCCTGGGTGATTTGAGGGGGACT
CAGTGCTGGCAAATCGCTATATTTATCAAGTGATGTAACTTTGAGGTGGGCAGTTGGCCT
CGGTCTTCTATTAATTGCTAAGTGATCATTCATCATTTACTATTAGCAGCTTGTCTATGC
CATTTTTCGGGGAGCCAGGTTATGTAGGCCTATTAACATTTTATCTGTTTGCAAATACTT
ACAAAACTGCTAATGGTCTGTTTGGTTCCAGGGACTAAAGATTAGTCCCTCAGTCTCATT
ATTTTATTTTGCAATGAGAAAACAGATTAACCCAACAAGGTGGAACATACCATACATAAT
TATCAACTTATATGGTCAAGAATGAGGATAAAATCTGCCCATAGAGAAGGGAATAAATTG
TAACCAGTTGACTGATGAAATCAGCCCCAACTTTATTTTAGTGCCCCCATTAGTCTGCAT
GAGCACTGTTACCAGATACAACTTCATATAGAATTATGGATTATGGAAGTAAGTACACCT
TGCAGTCTGCTTCTGTACTTTGGTATGAATATAGATGTTCTATCTGTATTTGTATGGGTC
TTAGCACCACATTCTTGCAGGGTCGATCGATCGACTTATTTTCTTGACTATTCACATTTC
TCTTTTGCCCATAAGTTACAGTTGACAACTCTTCTTCTTTAGGACTTCTGTAGGCCTTAT
TAAACTGCTACTGTATATTGTTTTTCGGATCATGGTTCTGCTATACATTGTTGAGTTCTG
GCTAAGTTTGTTGTAACCCATGTTGATATCAACCAATATTCTAGGCATTGGATGTTGGAG
AGGAAACTAGCAGATGCAGATGTATCTGAAGAAGAGCAAAACAATATACTGAAAGATTTA
GAAAAAAAGGAGGCGGAATACATGCGCCTACGAAGGCATAAAATGGGCGTTGATGACTTT
GAATTGCTCACCATTATTGGGAGAGGTGCATTTGGGGAGGTAACAAATATTTGAGTCATC
CTCTTTGATACAATATATAGTTGGGTGTTCTGTAATGAACAACAGTTTACTCAATACTTC
GAGAGATCTCAGCTCTCTTGAGAAATACATGCAGGTCTCTAAAGAGACAATGTCTGTTTT
CTGTGTCTGCCTGCAGCTTACCCCATTATAATATTTTGCAGGTGAGACTTTGTAGAGAAA
AAACTACATCCAATGTGTATGCAATGAAAAAGCTTAAGAAGTCTAAAATGTTAC