Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034338_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:290204343:290207367:1 gene:Zm00001d034338 gene_biotype:protein_coding transcript_biotype:protein_coding description:Deoxyribodipyrimidine photolyase

Sequence

ATGAGCTCCGCTGCAGCCGCCGCCAATGTCGCCGTCATCGGAGGCGGAATATCCGGCTCC
GTGTGCGCGTCGCTCCTCGCCGCGCGGGGCGTGGCCGTGACGCTCTTCGACTCCGGCCGC
GGCGCCGGCGGCCGCATGGCGCAGCGGAGGGAGGTGATGGAGGATGGCTCGGAGCTGCGG
TTCGACCACGGTGCGCCCTACTTCACCGTCACCAACGGCGAGGTTGCCCGGGTCGTTGGT
GGGTGGGAGGCGCGGGGGATCGTCGCCGAGTGGAAGGCAACGTTCGCGTGCTTCGATCTG
GCCACCGGAAAATTTACGGACTTCGAGAAGGAGGGAACAGCTAAAAAGTATGTGGGAGTG
CCAGCCATGAACTCGATATGCAAATCACTCTGTCTAGAGGATGGTGTGGTGGCCAAATTT
GGTGTCACTGTGGGCAAGATGGATTGGCTTCAAGATCGGAGTTCGTGGTCACTAGCTAGC
CTGGATGGGAAAGATCTAGGCTATTTTGATTATGTTGTGGCGACAGATAAGAACATAGCG
TCACCAGCATTTTCTGGGTTGACTGGAAGACCGCCACCTCTTGATTTGTCGTCATTTCCA
CGCCTGCCTACAGCACTTCAAGATATCCCAGTTCGTCCATGTTTTGCTCTTATGGTAGCA
TTCTCGGAGCCATTGGCTACGGTACCTGTTCATGGTTTCTCTTTCAACAATTCCAATTCT
CTGAGCTGGGCCTTCTGTAACAGCAGTAAGCCAGGGCGTGCTTGCGTACCTCCAAACAGA
CAATCTTGGGTGCTGCATTCGACAACTGAGTACGCTTCCAAGGTAATAAATAATATTGGT
CCACGCAAACCTTCGGCGGAGGCGCTTGCTAAGGTGGCAGAGGAATTGTTCAGAGAATTC
CAGGCGACTGGATTAAGCATTCCACGACCAATTTTTTTGAAAGCTCACAGATGGGGTGCT
GCCTTCCCAGCCATTGCAATTAGTGGAGATGATAAGTGCGTTTGGGACAAGAGCACGAAC
TTGGCAATTTGTGGAGATTTCTGTACAAGCCCAAGTGTCGAAGGAGCAGTCCTTAGTGCT
ACGAGAGGAGTTTCCGAAATCCTTGAATGTTTAAGGTGCCCGTCAAGTATCTAA

Peptide Sequence

PEP ID

Zm00001d034338_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:290204343:290207367:1 gene:Zm00001d034338 transcript:Zm00001d034338_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Deoxyribodipyrimidine photolyase

Sequence

MSSAAAAANVAVIGGGISGSVCASLLAARGVAVTLFDSGRGAGGRMAQRREVMEDGSELR
FDHGAPYFTVTNGEVARVVGGWEARGIVAEWKATFACFDLATGKFTDFEKEGTAKKYVGV
PAMNSICKSLCLEDGVVAKFGVTVGKMDWLQDRSSWSLASLDGKDLGYFDYVVATDKNIA
SPAFSGLTGRPPPLDLSSFPRLPTALQDIPVRPCFALMVAFSEPLATVPVHGFSFNNSNS
LSWAFCNSSKPGRACVPPNRQSWVLHSTTEYASKVINNIGPRKPSAEALAKVAEELFREF
QATGLSIPRPIFLKAHRWGAAFPAIAISGDDKCVWDKSTNLAICGDFCTSPSVEGAVLSA
TRGVSEILECLRCPSSI

Transcript Sequence

Transcript ID

Zm00001d034338_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:290204343:290207367:1 gene:Zm00001d034338 gene_biotype:protein_coding transcript_biotype:protein_coding description:Deoxyribodipyrimidine photolyase

Sequence

CTCCCGGCCTCGGCTGCACCGCTCTGTATACTCTCCGGTGAATCGCTCCCAGTCCCAAGT
CCGGATCGCACCGCGAAGCGTTCAGCCATGAGCTCCGCTGCAGCCGCCGCCAATGTCGCC
GTCATCGGAGGCGGAATATCCGGCTCCGTGTGCGCGTCGCTCCTCGCCGCGCGGGGCGTG
GCCGTGACGCTCTTCGACTCCGGCCGCGGCGCCGGCGGCCGCATGGCGCAGCGGAGGGAG
GTGATGGAGGATGGCTCGGAGCTGCGGTTCGACCACGGTGCGCCCTACTTCACCGTCACC
AACGGCGAGGTTGCCCGGGTCGTTGGTGGGTGGGAGGCGCGGGGGATCGTCGCCGAGTGG
AAGGCAACGTTCGCGTGCTTCGATCTGGCCACCGGAAAATTTACGGACTTCGAGAAGGAG
GGAACAGCTAAAAAGTATGTGGGAGTGCCAGCCATGAACTCGATATGCAAATCACTCTGT
CTAGAGGATGGTGTGGTGGCCAAATTTGGTGTCACTGTGGGCAAGATGGATTGGCTTCAA
GATCGGAGTTCGTGGTCACTAGCTAGCCTGGATGGGAAAGATCTAGGCTATTTTGATTAT
GTTGTGGCGACAGATAAGAACATAGCGTCACCAGCATTTTCTGGGTTGACTGGAAGACCG
CCACCTCTTGATTTGTCGTCATTTCCACGCCTGCCTACAGCACTTCAAGATATCCCAGTT
CGTCCATGTTTTGCTCTTATGGTAGCATTCTCGGAGCCATTGGCTACGGTACCTGTTCAT
GGTTTCTCTTTCAACAATTCCAATTCTCTGAGCTGGGCCTTCTGTAACAGCAGTAAGCCA
GGGCGTGCTTGCGTACCTCCAAACAGACAATCTTGGGTGCTGCATTCGACAACTGAGTAC
GCTTCCAAGGTAATAAATAATATTGGTCCACGCAAACCTTCGGCGGAGGCGCTTGCTAAG
GTGGCAGAGGAATTGTTCAGAGAATTCCAGGCGACTGGATTAAGCATTCCACGACCAATT
TTTTTGAAAGCTCACAGATGGGGTGCTGCCTTCCCAGCCATTGCAATTAGTGGAGATGAT
AAGTGCGTTTGGGACAAGAGCACGAACTTGGCAATTTGTGGAGATTTCTGTACAAGCCCA
AGTGTCGAAGGAGCAGTCCTTAGTGCTACGAGAGGAGTTTCCGAAATCCTTGAATGTTTA
AGGTGCCCGTCAAGTATCTAACGTTATTGTTACCATCCCCAGGGCCCCTCTCTGTGATTG
GTTGTATTTATGCCTGCATTCTCTTACACAAATAAACAATTCAAGCCTTATTTGGAGGCA
CATATTGTTCGTTTATGCTAAATAAGAAATAAAGTAACAGCAGAAGTTGCAAC