Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034256_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:1:288169338:288176921:1 gene:Zm00001d034256 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphohexose isomerase1 description: phosphohexose isomerase1
Sequence

ATGGCGTCGGCAGCGCTAATCTGCGGCACGGAGCAGTGGAAGGCCCTCCAGGCGCACGTC
GGCGCGATTCAGAAGACGCACCTGCGCGACCTGATGGCCGACGCCGACCGATGCAAGGCA
ATGACGGCTGAGTATGAAGGGATCTTTCTGGATTACTCGAGACAGCAGGCGACTGGTGAA
ACCATGGAGAAGCTCCTTAAATTGGCTGACGCTGCGAAGCTCAAGGAGAAGATTGAGAAG
ATGTTTAAAGGTGAAAAGATAAATAGCACAGAGAACAGGTCAGTGCTTCATGTAGCTCTG
AGGGCTCCAAGAGATGCAGTCATAAACAGTGATGGGGTGAATGTGGTCCCTGAGGTTTGG
AGTGTTAAAGATAAAATCAAGCAGTTTTCAGAGACTTTTAGAAGTGGATCATGGGTTGGA
GCAACTGGAAAACCGTTGACAAATGTTGTGTCGGTTGGAATAGGTGGTAGCTTTCTTGGC
CCTCTATTTGTGCATACTGCACTCCAGACCGATCCAGAAGCAGCAGAATGTGCAAAAGGC
CGGCAACTGAGATTCCTTGCAAATGTTGATCCAGTTGACGTTGCACGAAGCATTAAAGAT
TTGGATCCAGAAACCACTCTGGTGGTGGTTGTATCAAAGACATTCACAACAGCGGAAACA
ATGTTAAATGCTCGAACTCTTAAGGAGTGGATCGTTTCTTCTCTTGGGCCACAGGCTGTT
GCCAAACATATGATTGCTGTCAGCACTAATCTTAAGCTTGTGAAGGAGTTTGGAATTGAC
CCAAACAATGCTTTTGCCTTTTGGGACTGGGTTGGCGGCCGTTATAGTGTTTGCAGTGCT
GTTGGCGTTCTGCCATTATCTCTTCAGTATGGCTTTCCAATTGTCCAGAAATTTTTGGAG
GGAGCTTCCAGCATTGACAACCACTTCTACTCATCTTCATTTGAGAAAAATATACCTGTA
CTTCTTGGTTTGCTGAGTGTGTGGAATGTTTCATTTCTTGGTTATCCAGCTAGGGCAATA
TTGCCATATTCTCAGGCACTTGAGAAGTTGGCACCACATATACAGCAGCTTAGCATGGAG
AGTAACGGGAAGGGTGTTTCCATTGATGGCGCCCAACTTTCCTTTGAGACAGGTGAAATT
GATTTTGGTGAACCTGGAACTAATGGCCAGCACAGCTTCTATCAATTAATCCATCAGGGA
AGGGTTATCCCTTGCGACTTTATTGGTGTTGTTAAAAGTCAGCAGCCTGTTTACTTGAAA
GGGGAAACTGTGAGTAATCATGATGAGCTTATGTCCAATTTCTTTGCCCAACCTGATGCT
CTTGCTTATGGAAAGACTCCTGAACAGTTGCACAGTGAGAAAGTTCCAGAAAATCTTATC
CCTCATAAGACTTTTAAGGGCAACCGGCCATCACTAAGTTTGCTTCTGCCTACACTATCC
GCATATGAGGTTGGACAGCTTTTATCCATCTATGAGCACCGGATTGCAGTTCAGGGCTTC
ATATGGGGAATTAACTCATTTGACCAGTGGGGAGTGGAGCTAGGGAAGTCACTCGCTTCT
CAAGTGAGGAAACAGCTGCATGGAACCCGGATGGAAGGAAAGCCTGTTGAGGGTTTTAAC
CACAGCACTTCAAGTTTGCTTGCACGATATCTTGCTGTCAAGCCATCCACCCCGTATGAT
ACTACCGTGCTGCCGAAGGTGTAA

Peptide Sequence

PEP ID

Zm00001d034256_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:1:288169338:288176921:1 gene:Zm00001d034256 transcript:Zm00001d034256_T005 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphohexose isomerase1 description: phosphohexose isomerase1
Sequence

MASAALICGTEQWKALQAHVGAIQKTHLRDLMADADRCKAMTAEYEGIFLDYSRQQATGE
TMEKLLKLADAAKLKEKIEKMFKGEKINSTENRSVLHVALRAPRDAVINSDGVNVVPEVW
SVKDKIKQFSETFRSGSWVGATGKPLTNVVSVGIGGSFLGPLFVHTALQTDPEAAECAKG
RQLRFLANVDPVDVARSIKDLDPETTLVVVVSKTFTTAETMLNARTLKEWIVSSLGPQAV
AKHMIAVSTNLKLVKEFGIDPNNAFAFWDWVGGRYSVCSAVGVLPLSLQYGFPIVQKFLE
GASSIDNHFYSSSFEKNIPVLLGLLSVWNVSFLGYPARAILPYSQALEKLAPHIQQLSME
SNGKGVSIDGAQLSFETGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQPVYLK
GETVSNHDELMSNFFAQPDALAYGKTPEQLHSEKVPENLIPHKTFKGNRPSLSLLLPTLS
AYEVGQLLSIYEHRIAVQGFIWGINSFDQWGVELGKSLASQVRKQLHGTRMEGKPVEGFN
HSTSSLLARYLAVKPSTPYDTTVLPKV

Transcript Sequence

Transcript ID

Zm00001d034256_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:288169338:288176921:1 gene:Zm00001d034256 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphohexose isomerase1 description: phosphohexose isomerase1
Sequence

GTGTTAACCCGTCCCCCAATCCCCCCTCGCCCCCTCGATCTTTTTGCTCTCTCGGTTTGG
TGTGCACCGCGTCACGCCGATCCTCAGCCTGTTGGTTACCATAGCTCGATCGGGAGGTTG
CTTGGACTTGTAGCGGAAGCCATGGCGTCGGCAGCGCTAATCTGCGGCACGGAGCAGTGG
AAGGCCCTCCAGGCGCACGTCGGCGCGATTCAGAAGACGCACCTGCGCGACCTGATGGCC
GACGCCGACCGATGCAAGGCAATGACGGCTGAGTATGAAGGGATCTTTCTGGATTACTCG
AGACAGCAGGCGACTGGTGAAACCATGGAGAAGCTCCTTAAATTGGCTGACGCTGCGAAG
CTCAAGGAGAAGATTGAGAAGATGTTTAAAGGTGAAAAGATAAATAGCACAGAGAACAGG
TCAGTGCTTCATGTAGCTCTGAGGGCTCCAAGAGATGCAGTCATAAACAGTGATGGGGTG
AATGTGGTCCCTGAGGTTTGGAGTGTTAAAGATAAAATCAAGCAGTTTTCAGAGACTTTT
AGAAGTGGATCATGGGTTGGAGCAACTGGAAAACCGTTGACAAATGTTGTGTCGGTTGGA
ATAGGTGGTAGCTTTCTTGGCCCTCTATTTGTGCATACTGCACTCCAGACCGATCCAGAA
GCAGCAGAATGTGCAAAAGGCCGGCAACTGAGATTCCTTGCAAATGTTGATCCAGTTGAC
GTTGCACGAAGCATTAAAGATTTGGATCCAGAAACCACTCTGGTGGTGGTTGTATCAAAG
ACATTCACAACAGCGGAAACAATGTTAAATGCTCGAACTCTTAAGGAGTGGATCGTTTCT
TCTCTTGGGCCACAGGCTGTTGCCAAACATATGATTGCTGTCAGCACTAATCTTAAGCTT
GTGAAGGAGTTTGGAATTGACCCAAACAATGCTTTTGCCTTTTGGGACTGGGTTGGCGGC
CGTTATAGTGTTTGCAGTGCTGTTGGCGTTCTGCCATTATCTCTTCAGTATGGCTTTCCA
ATTGTCCAGAAATTTTTGGAGGGAGCTTCCAGCATTGACAACCACTTCTACTCATCTTCA
TTTGAGAAAAATATACCTGTACTTCTTGGTTTGCTGAGTGTGTGGAATGTTTCATTTCTT
GGTTATCCAGCTAGGGCAATATTGCCATATTCTCAGGCACTTGAGAAGTTGGCACCACAT
ATACAGCAGCTTAGCATGGAGAGTAACGGGAAGGGTGTTTCCATTGATGGCGCCCAACTT
TCCTTTGAGACAGGTGAAATTGATTTTGGTGAACCTGGAACTAATGGCCAGCACAGCTTC
TATCAATTAATCCATCAGGGAAGGGTTATCCCTTGCGACTTTATTGGTGTTGTTAAAAGT
CAGCAGCCTGTTTACTTGAAAGGGGAAACTGTGAGTAATCATGATGAGCTTATGTCCAAT
TTCTTTGCCCAACCTGATGCTCTTGCTTATGGAAAGACTCCTGAACAGTTGCACAGTGAG
AAAGTTCCAGAAAATCTTATCCCTCATAAGACTTTTAAGGGCAACCGGCCATCACTAAGT
TTGCTTCTGCCTACACTATCCGCATATGAGGTTGGACAGCTTTTATCCATCTATGAGCAC
CGGATTGCAGTTCAGGGCTTCATATGGGGAATTAACTCATTTGACCAGTGGGGAGTGGAG
CTAGGGAAGTCACTCGCTTCTCAAGTGAGGAAACAGCTGCATGGAACCCGGATGGAAGGA
AAGCCTGTTGAGGGTTTTAACCACAGCACTTCAAGTTTGCTTGCACGATATCTTGCTGTC
AAGCCATCCACCCCGTATGATACTACCGTGCTGCCGAAGGTGTAATTACTCAGTTGTTTT
TGACATGCCAATTGCTGAGTTCTGACTTGGCAAGGTTGAGCATAAGTCTTTCTTCATTTG
GGAGTTATCACAGAGCCAGTTTGGCAGTGCTGTAGTTTTGGTTTTACCTACTCTTTGTAG
AAGAAAAGTGAAGAGTGGATATTATGGAACAAAATATATACCTACGGCAGCACGCAGCAT
GATGAAACATATTTAAAAAATTTGGGTGCTCTACCACATGCCCGTGGAATAAAACGGATG
TAAACTCAGTGCACTTATAACACCCTAATTGTGGTTTTGTTTGTGGTTCAAACTTCTATA
CCGAGGCATCGATCGTG