Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034241_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:287663868:287667586:-1 gene:Zm00001d034241 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malate dehydrogenase

Sequence

ATGCAGCCCGACGCCAACGCTCCCTCGCACCGCCTCGCCCGCGTCGCCGCGCACCTAAAC
CCCCAGCGGCCGCAGATGGAGGAAGGCGCGTCCGCACTGAGGCTCGTGGTGTGCCGCGCC
AAGGGCGGCGCGCCGGGGTTCAAGGTCGCGATCCTGGGCGCCGCGGGCGGGATCGGACAG
CCGCTGTCACTGCTCATGAAGATGAATCCTCTCGTGTCCGTGCTGCACCTCTACGATGTC
GTCAACACGCCCGGGGTCACGGCCGATGTCAGCCACATGGACACCAGCGCTGTGGTCCGC
GGCTTCCTTGGGGCACAGCAGCTTGATGCCGCACTTACAGGAATGGACCTTGTAATCATA
CCCGCTGGACTCCCTAGGAAACCAGGAATGACAAGAGATGATTTATTCAACAAAAATGCT
GGGATTGTTCGTACACTATGTGAAGGCGTTGCAAGATGCTGTCCTAATGCAATTGTGAAT
CTGATCAGCAACCCAGTGAACTCAACTGTCCCCATTGCTGCTGAGGTTTTCAAGAAAGCT
GGAACTTATGATCCCAAGCGGCTTCTTGGAGTGACAACACTCGATGTTGCGAGGGCTAAC
ACCTTTGTGGCCGAAGTGCTTGGAGTTGATCCAAGAGATGTCAGTGTTCCTGTTGTTGGA
GGGCATGCTGGGATAACTATATTGCCCCTCCTCTCCCAGGTTACACCTCCGAGCTCATTC
ACTCAGGATGAAACCAGATATTTGACAGACCGCATACAGAATGGTGGCACAGAAGTTGTG
GAGGCAAAGGCTGGATCAGGCTCCGCGACTCTGTCAATGGCTTTTGCTGCTTCTAAATTC
GCTGACGCATGCTTGCGAGCTATGCGGGGCGAAGCTGGAATCGTGGAATGCTCATATGTT
GCATCCGAGGTGACAGAACTGCCGTTCTTTGCAACGAAAGTGAGGCTTGGCCGTGGTGGA
GCCGAGGAGATCCTCCCGCTTGGCCCTTTGAATGATTTCGAGAGAGCTGGTCTGGAAGCG
GCAAAGAAGGAACTGGGCGAGAGCATTCAGAAGGGCATCGCTTTCATGAGCAAGTGA

Peptide Sequence

PEP ID

Zm00001d034241_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:287663868:287667586:-1 gene:Zm00001d034241 transcript:Zm00001d034241_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malate dehydrogenase

Sequence

MQPDANAPSHRLARVAAHLNPQRPQMEEGASALRLVVCRAKGGAPGFKVAILGAAGGIGQ
PLSLLMKMNPLVSVLHLYDVVNTPGVTADVSHMDTSAVVRGFLGAQQLDAALTGMDLVII
PAGLPRKPGMTRDDLFNKNAGIVRTLCEGVARCCPNAIVNLISNPVNSTVPIAAEVFKKA
GTYDPKRLLGVTTLDVARANTFVAEVLGVDPRDVSVPVVGGHAGITILPLLSQVTPPSSF
TQDETRYLTDRIQNGGTEVVEAKAGSGSATLSMAFAASKFADACLRAMRGEAGIVECSYV
ASEVTELPFFATKVRLGRGGAEEILPLGPLNDFERAGLEAAKKELGESIQKGIAFMSK

Transcript Sequence

Transcript ID

Zm00001d034241_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:287663868:287667586:-1 gene:Zm00001d034241 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malate dehydrogenase

Sequence

ATACTGCATCATACCGCACCGGCAGTGGCGGAGAAAAGAGATGAGCCAGCCGGGGCCGGG
AGCCATCGCCGCCTCATGCCTCCCGACTCCGTGACGGCCCGCAGCCACAGGCCACCGGAT
AACGCACACAGCGGAACCATCCAAAAACGCGGGAGCTTTCCCCCGTCAAAGCCCCCACCC
TAATCCCCCGTCTCGCGCGCCAATCAACCAGCACCGGGAGCAGGAGCAAGAGCAACTCAC
CCTCCCCTCCGGCTTCCGCGGAACTAGGAGCTGCCATGCAGCCCGACGCCAACGCTCCCT
CGCACCGCCTCGCCCGCGTCGCCGCGCACCTAAACCCCCAGCGGCCGCAGATGGAGGAAG
GCGCGTCCGCACTGAGGCTCGTGGTGTGCCGCGCCAAGGGCGGCGCGCCGGGGTTCAAGG
TCGCGATCCTGGGCGCCGCGGGCGGGATCGGACAGCCGCTGTCACTGCTCATGAAGATGA
ATCCTCTCGTGTCCGTGCTGCACCTCTACGATGTCGTCAACACGCCCGGGGTCACGGCCG
ATGTCAGCCACATGGACACCAGCGCTGTGGTCCGCGGCTTCCTTGGGGCACAGCAGCTTG
ATGCCGCACTTACAGGAATGGACCTTGTAATCATACCCGCTGGACTCCCTAGGAAACCAG
GAATGACAAGAGATGATTTATTCAACAAAAATGCTGGGATTGTTCGTACACTATGTGAAG
GCGTTGCAAGATGCTGTCCTAATGCAATTGTGAATCTGATCAGCAACCCAGTGAACTCAA
CTGTCCCCATTGCTGCTGAGGTTTTCAAGAAAGCTGGAACTTATGATCCCAAGCGGCTTC
TTGGAGTGACAACACTCGATGTTGCGAGGGCTAACACCTTTGTGGCCGAAGTGCTTGGAG
TTGATCCAAGAGATGTCAGTGTTCCTGTTGTTGGAGGGCATGCTGGGATAACTATATTGC
CCCTCCTCTCCCAGGTTACACCTCCGAGCTCATTCACTCAGGATGAAACCAGATATTTGA
CAGACCGCATACAGAATGGTGGCACAGAAGTTGTGGAGGCAAAGGCTGGATCAGGCTCCG
CGACTCTGTCAATGGCTTTTGCTGCTTCTAAATTCGCTGACGCATGCTTGCGAGCTATGC
GGGGCGAAGCTGGAATCGTGGAATGCTCATATGTTGCATCCGAGGTGACAGAACTGCCGT
TCTTTGCAACGAAAGTGAGGCTTGGCCGTGGTGGAGCCGAGGAGATCCTCCCGCTTGGCC
CTTTGAATGATTTCGAGAGAGCTGGTCTGGAAGCGGCAAAGAAGGAACTGGGCGAGAGCA
TTCAGAAGGGCATCGCTTTCATGAGCAAGTGAAAGCGGAGCGGTACGGAGGGATCGTCCC
TGAGTCAGATCCGGACCATACGTAGTAACGTAGATGTAGGGTGTTGTGATATAGTGCTCC
TACCTATACTTGTAAGGCCACGGTAAAAAGAAGGCTAATTACCCTTTAGCAACTGTGACC
ATCTACTTGGCATAATGGCATGGAATAAATCTTTCGTCTTCGGTGGCGGACAAGGGCCGT
GCCTGCTCTGTGCTTTGCTGGACGGTGGGTGAGCCACAGCGGGGCCGCAGGAACAACAGA
ATAGCATTGGTT