Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034205_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:286738442:286742476:-1 gene:Zm00001d034205 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable xyloglucan glycosyltransferase 12
Sequence

ATGGCGCCGTGGAGCGGCTTCTGGGGCGGCAAGCCCGGCGGCGACGCCTACCGGGGCACG
CCGGTGGTGGTCAAGATGGAGAACCCCAACTGGTCCATCTCCGAGATCTCCTCGCCGGAG
GACGACGACGAGGACATCTTGGCCGCCGCCGCCGCCGCCGGCCGCCGCAACAAGGGGGGC
CGCACCAAGAACGCCAAGCAGATCAGGTGGGTGCTGCTCCTCAAGGCGCACCGCGCCGCC
GGGTGCCTCGCCTCGCTGGCCTCCGCCGCCGTCGCGCTCGGCGGCGCGGCCAGGCGCAGG
GTGGCCGCGGGGAGGACCGACGCCGAGGCCGGCGTCGTGGCCGCCGCCGGCGAGAGCCCC
GTGGTGCGCTCCAGGTTCTACGCCTTCATCAAGGCCTTCCTCGTCGTCTCCCTGCTGCTC
CTGGCCGTCGAGGTCGCCGCGTACTTCAACGGCTGGGACCTCGCCGCCTCCGCGCTCGCA
CTCCCCGCCATCGGCCTCGAGTCGCTGTACGCCTCCTGGCTGCGCTTCCGCGCCACCTAC
GTTGCGCCGGGGATACAGTTCCTCACCGACGCCTGCGTCGTGCTCTTCCTCATCCAGAGC
GCCGACCGACTCATCCAGTGCCTCGGCTGCTTCTACATTCACATCAAGCGCATCAAGCCC
AAGCCCAGGTCGCTTGCATTGCCTGATGCGGAGGACCCGGATGCCGGGTACTACCCCATG
GTACTTGTGCAGATACCAATGTGCAACGAGAAGGAGGTGTATCAACAATCAATCGCGGCC
GTGTGCAACCTTGACTGGCCCAAATCCAACTTCTTGGTCCAGGTGTTGGATGACTCGGAC
GACCCACTCACACAGACTCTGATCAGAGAAGAGGTGGCCAAATGGCAACAGCAGGGTGCC
CGGATTGTGTACAGGCACCGTGTGCTGAGGGATGGTTACAAGGCTGGAAACCTCAAGTCG
GCCATGAGCTGCAGCTATGTGAAGGAGTACGAGTTTGTTGCCATCTTTGACGCAGACTTC
CAACCTCATCCCGACTTTCTGAAGCGCACTGTGCCACATTTCAAGGACAATGATGAGCTT
GGGCTAGTGCAAGCAAGATGGTCCTTTGTCAATAAGGATGAGAACCTGCTGACTCGGTTG
CAATATATTAACCTTTGCTTCCACTTTGAGGTGGAACAGCAGGTGAATGGAGTGTTCTTA
AACTTCTTTGGGTTCAATGGCACTGCTGGGGTGTGGAGGATCAAGGCATTGGAGGACTCA
GGTGGATGGTTGGAACGGACAACCGTGGAGGATATGGACATTGCTGTTAGGGCACATCTC
CATGGCTGGAAGTTTATATTCCTGAATGACGTTGAGTGCCAGTGCGAATTGCCCGAGTCT
TATGAGGCTTACAGGAAGCAGCAGCATCGGTGGCATTCGGGTCCAATGCAGCTATTCAGG
CTTTGTTTACCGGACATCATCAAATGCAAGATTGCATTTTGGAAGAAGGCGAACCTGATA
TTCCTTTTCTTCCTGCTCCGGAAGCTCATACTGCCTTTCTACTCCTTCACGCTGTTCTGC
ATCATCCTCCCGATGACGATGTTCGTGCCGGAGGCCGAGCTCCCCGACTGGGTGGTGTGC
TACGTCCCGGCCCTGATGTCCCTGCTGAACATCCTGCCGTCCCCCAAGTCGTTCCCCTTC
ATCATCCCGTACCTGCTCTTCGAGAACACCATGTCCGTGACCAAGTTCAACGCGATGATC
TCCGGGCTGTTCCAGCTGGGGAGCGCGTACGAGTGGGTGGTGACCAAGAAGTCGGGCCGC
TCGTCGGAGGGCGACCTCATCGCGCTGGCCCCGCCCAAGGAGCCTGTGAAGCACGCGACG
AGGACGGGCTCCGCGCCGAACCTCGACGCCGTCGCCAAGGAGGAGCAACAGCAGCAGCAG
CTGGCGGCGTCGAGGAAGGACGCCGCCGCGAAGAAGAAGGAGAAGCACAACCGGATATAC
AAGAAGGAGCTGGCGCTGTCGATGCTGCTCCTGACCGCGGCCGCCCGGAGCCTGCTGTCG
AAGCAGGGCATACACTTCTACTTCCTCCTGTTCCAGGGCGTGTCCTTCTTGCTAGTAGGC
CTTGACCTCATAGGCGAGCAGGTCGAGTGA

Peptide Sequence

PEP ID

Zm00001d034205_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:286738442:286742476:-1 gene:Zm00001d034205 transcript:Zm00001d034205_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable xyloglucan glycosyltransferase 12
Sequence

MAPWSGFWGGKPGGDAYRGTPVVVKMENPNWSISEISSPEDDDEDILAAAAAAGRRNKGG
RTKNAKQIRWVLLLKAHRAAGCLASLASAAVALGGAARRRVAAGRTDAEAGVVAAAGESP
VVRSRFYAFIKAFLVVSLLLLAVEVAAYFNGWDLAASALALPAIGLESLYASWLRFRATY
VAPGIQFLTDACVVLFLIQSADRLIQCLGCFYIHIKRIKPKPRSLALPDAEDPDAGYYPM
VLVQIPMCNEKEVYQQSIAAVCNLDWPKSNFLVQVLDDSDDPLTQTLIREEVAKWQQQGA
RIVYRHRVLRDGYKAGNLKSAMSCSYVKEYEFVAIFDADFQPHPDFLKRTVPHFKDNDEL
GLVQARWSFVNKDENLLTRLQYINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEDS
GGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFR
LCLPDIIKCKIAFWKKANLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPDWVVC
YVPALMSLLNILPSPKSFPFIIPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGR
SSEGDLIALAPPKEPVKHATRTGSAPNLDAVAKEEQQQQQLAASRKDAAAKKKEKHNRIY
KKELALSMLLLTAAARSLLSKQGIHFYFLLFQGVSFLLVGLDLIGEQVE

Transcript Sequence

Transcript ID

Zm00001d034205_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:286738442:286742476:-1 gene:Zm00001d034205 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable xyloglucan glycosyltransferase 12
Sequence

GTGTTGAGCTGTTTCCCAGTCCTTCGTCGCTTTCCCTCCGCTCAGGCCTCAGCAGCATCA
GCTCCCCACCCCACCCCACGCCTCCCCTCCTCTTCCTTCATAAGCTCACTCTCAAACGGA
GGTGGAGCGGAGCTAGCTTCTGCAGGGTACCACTAGTACCAGTAACCTCTGGGGATTTTC
CTGTGAGAAGAGGGATTGGCATTGGACTGGACTGGAGCTTGGGGGGGAGCCAAAAGCAAA
AAGAAGCCCAGGATTAGCGTGTGGCGGATTGCGTGGCTATTTCGGGAGGCGAGAGAACGA
GAGGCGTGGGGCCTAGGCCGGGGGAGGCGGCGGCTCCTTGGACCGGCCATTGATGGCGCC
GTGGAGCGGCTTCTGGGGCGGCAAGCCCGGCGGCGACGCCTACCGGGGCACGCCGGTGGT
GGTCAAGATGGAGAACCCCAACTGGTCCATCTCCGAGATCTCCTCGCCGGAGGACGACGA
CGAGGACATCTTGGCCGCCGCCGCCGCCGCCGGCCGCCGCAACAAGGGGGGCCGCACCAA
GAACGCCAAGCAGATCAGGTGGGTGCTGCTCCTCAAGGCGCACCGCGCCGCCGGGTGCCT
CGCCTCGCTGGCCTCCGCCGCCGTCGCGCTCGGCGGCGCGGCCAGGCGCAGGGTGGCCGC
GGGGAGGACCGACGCCGAGGCCGGCGTCGTGGCCGCCGCCGGCGAGAGCCCCGTGGTGCG
CTCCAGGTTCTACGCCTTCATCAAGGCCTTCCTCGTCGTCTCCCTGCTGCTCCTGGCCGT
CGAGGTCGCCGCGTACTTCAACGGCTGGGACCTCGCCGCCTCCGCGCTCGCACTCCCCGC
CATCGGCCTCGAGTCGCTGTACGCCTCCTGGCTGCGCTTCCGCGCCACCTACGTTGCGCC
GGGGATACAGTTCCTCACCGACGCCTGCGTCGTGCTCTTCCTCATCCAGAGCGCCGACCG
ACTCATCCAGTGCCTCGGCTGCTTCTACATTCACATCAAGCGCATCAAGCCCAAGCCCAG
GTCGCTTGCATTGCCTGATGCGGAGGACCCGGATGCCGGGTACTACCCCATGGTACTTGT
GCAGATACCAATGTGCAACGAGAAGGAGGTGTATCAACAATCAATCGCGGCCGTGTGCAA
CCTTGACTGGCCCAAATCCAACTTCTTGGTCCAGGTGTTGGATGACTCGGACGACCCACT
CACACAGACTCTGATCAGAGAAGAGGTGGCCAAATGGCAACAGCAGGGTGCCCGGATTGT
GTACAGGCACCGTGTGCTGAGGGATGGTTACAAGGCTGGAAACCTCAAGTCGGCCATGAG
CTGCAGCTATGTGAAGGAGTACGAGTTTGTTGCCATCTTTGACGCAGACTTCCAACCTCA
TCCCGACTTTCTGAAGCGCACTGTGCCACATTTCAAGGACAATGATGAGCTTGGGCTAGT
GCAAGCAAGATGGTCCTTTGTCAATAAGGATGAGAACCTGCTGACTCGGTTGCAATATAT
TAACCTTTGCTTCCACTTTGAGGTGGAACAGCAGGTGAATGGAGTGTTCTTAAACTTCTT
TGGGTTCAATGGCACTGCTGGGGTGTGGAGGATCAAGGCATTGGAGGACTCAGGTGGATG
GTTGGAACGGACAACCGTGGAGGATATGGACATTGCTGTTAGGGCACATCTCCATGGCTG
GAAGTTTATATTCCTGAATGACGTTGAGTGCCAGTGCGAATTGCCCGAGTCTTATGAGGC
TTACAGGAAGCAGCAGCATCGGTGGCATTCGGGTCCAATGCAGCTATTCAGGCTTTGTTT
ACCGGACATCATCAAATGCAAGATTGCATTTTGGAAGAAGGCGAACCTGATATTCCTTTT
CTTCCTGCTCCGGAAGCTCATACTGCCTTTCTACTCCTTCACGCTGTTCTGCATCATCCT
CCCGATGACGATGTTCGTGCCGGAGGCCGAGCTCCCCGACTGGGTGGTGTGCTACGTCCC
GGCCCTGATGTCCCTGCTGAACATCCTGCCGTCCCCCAAGTCGTTCCCCTTCATCATCCC
GTACCTGCTCTTCGAGAACACCATGTCCGTGACCAAGTTCAACGCGATGATCTCCGGGCT
GTTCCAGCTGGGGAGCGCGTACGAGTGGGTGGTGACCAAGAAGTCGGGCCGCTCGTCGGA
GGGCGACCTCATCGCGCTGGCCCCGCCCAAGGAGCCTGTGAAGCACGCGACGAGGACGGG
CTCCGCGCCGAACCTCGACGCCGTCGCCAAGGAGGAGCAACAGCAGCAGCAGCTGGCGGC
GTCGAGGAAGGACGCCGCCGCGAAGAAGAAGGAGAAGCACAACCGGATATACAAGAAGGA
GCTGGCGCTGTCGATGCTGCTCCTGACCGCGGCCGCCCGGAGCCTGCTGTCGAAGCAGGG
CATACACTTCTACTTCCTCCTGTTCCAGGGCGTGTCCTTCTTGCTAGTAGGCCTTGACCT
CATAGGCGAGCAGGTCGAGTGAAATGTGTAAAACAGGAAATTGATAGGTGTGGGGAAAAA
AAAACGGTGAGTCACCATGGATGGAAGTGCTGGGAGAGGAGGGGGATGTGTTATTTCTGG
CTGGCTGCCATGGCACGGCGGCATGGCATGGCATGGCAGCAGCTCTTGGGCGCTTCTTGG
CTGAGATTCGGAACATGCGTTGTGCGGTTGAGCCTTCCCGGATCTGTCCTGGCTGCACGG
CATGGTATCCCACACGTGAGAGAGCAACCTCCTCCGCCTGTACGGAGGTGTAGATACAGT
TTTCTCTTGTTTTTTCATGTGTGTGGGCCTGTTCGCCTGTACGAATGGTGAAGGTAAACA
GAGAGTCGCCGCTGGATTAGGGAGACGCCCGTGTACTTGCTGCTGGACGCTGATCTGTTG
CTTGCTGCTCCACTTGTGCGCACAAGTAGGGAGTAGAGATCCAGATCCCGCGCTCGTCCA
TACGTGTTTGTTGTACCTGCCCCCCGTCCCACGCTGGGGAAAGCTGGGAGTTGTCGAGCG
CGGTGTCACATGATTGGAAGATCTGTGTCTCCTTCATATGCCCCGTAATCATTGTGGATC
AAGATTACTTCCAGCAGCTGGTCAAACTGGTTCTTTCTGTCGAGCAGAACTTTTATTTTT
TTTCCCT