Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034196_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:286308136:286310829:-1 gene:Zm00001d034196 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C-type cytochrome synthesis protein1 description: C-type cytochrome synthesis protein1
Sequence

ATGCCGTCCCCGACGTCCTATCTTCTCCTGAATCCCTCCAAACCCTCCTCCTTCCGCCGA
CTCTCGGCCCCGCGCCTGAGCCGGTTCCATGTCTCCTGCGACGCGCCACGGGGCGGCGGG
AGGCGCGAGGTCATCCCCGCCGGTGCCAGCAAGGCCAAGAAACAGATCGTATTCTTCGAC
GCCGCCCCGCCGGTGTCCCAGGAGGGTGGAGGCGCCGTGAAGAAGGCGGGGAGCGAGAAG
CTTACCCAGGTGGGCAGCGGCAACGCAGCGCTGGCGTTGTTGAGGAGGGCAACCAAGATG
ACACTCTCGGTGCTGTCCAACCTCCCGCTCGCTATCTCCGAGATGTTCGCCATTGCCGCC
CTCATGGCTCTAGGAACGGTGATTGACCAGGGAGAGGCACCCAGCTACTACTTCGAGAAG
TTCCCCGAGGACAACCCGGTCTTCGGCTTCATCACGTGGAGGTGGATCCTCACCCCCGGG
TTCGACCACATGTTCTCCTCGCCAGTCTTCCTCGGCCTCCTTGCGCTCCTCGCGACGTCC
CTCATGGCTTGCACCTACACGACCCAGCTCCCCATGGTCAAGGTCGCAAGAAGATGGTCG
TTCACACATTCCGGAGAAAGAATACGGAAGCAGGAATTTGCGGACTCGCTTCCCCAAGCA
TCCATTCAGGATTTGGGAGTCATCTTGATGGGTGCTGGATATGAGGTATTCACCAAGGGT
CCATCTTTGTATGCTTTCAAAGGGCTAGCTGGTCGGTATGCGCCTATCGGCGTGCACTTG
GCGATGCTCTTCATCATGGCTGGTGCCACGCTAAGTGCGACAGGAAGCTTTAAGGGCTCC
GTGGATGTGCCTCAAGGGCTGAACTTTGTTATAGGAGATGTCATGAAACCTAGAGGGGTC
CTCTCTGTTGCGCCGGATGTTTTCAATACTGAAGTCCATGTCAACCGGTTCTACATGGAG
TACTATGACAGTGGAGAGGTCTCACAATTCTACAGTGACCTCTCCCTATTCAACCTTGAT
GGTAAAGAAGTGATGAGAAAGACTATCAAAGTGAACGATCCCCTGAGATACGGAGGGGTC
ACCATCTATCAGACAGACTGGGGATTTTCAGCATTGCAAGTGAAGAAAAATGGTGAAGGC
CCTTTCAATTTGGCGATGGCCCCCTTGAAACTGAATGGGGATAAGAAGCTCTTTGGAACA
TTCTTGCCACTTGAAGATTCAGACTCGTCGAATCCAAATGTCAAAGGAATATCAATGCTT
GCTCGAGATTTGCAGTCTATTGTGTTGTATGATCAAGATGGTAAGTTTGTAGGGGTCCGT
CGGCCAAGCTCAAAACTGCCTATTGAGATCAATGGCAATGAAATACTCATTGAAGATGCT
ATTGGTAGTACTGGACTGGATCTTAAGACTGATCCAGGAGTTCCTATTGTTTATGCTGGT
TTTGGTGCGCTTATGTTAACGACCTGCATTAGCTATCTTTCACACTCTCAGATATGGGCA
TTGCAAGATGGAAGTACAGTGGTCGTTGGAGGAAAGACAAATCGAGCCAAACTTGAATTT
TCTGAAGAGATGAACCGGCTACTTGATAAAGTACCAGAGCTGATCAGCGCCGATGAGAAT
CTATTAGATACCAAATCGACAGCCACATGA

Peptide Sequence

PEP ID

Zm00001d034196_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:286308136:286310829:-1 gene:Zm00001d034196 transcript:Zm00001d034196_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C-type cytochrome synthesis protein1 description: C-type cytochrome synthesis protein1
Sequence

MPSPTSYLLLNPSKPSSFRRLSAPRLSRFHVSCDAPRGGGRREVIPAGASKAKKQIVFFD
AAPPVSQEGGGAVKKAGSEKLTQVGSGNAALALLRRATKMTLSVLSNLPLAISEMFAIAA
LMALGTVIDQGEAPSYYFEKFPEDNPVFGFITWRWILTPGFDHMFSSPVFLGLLALLATS
LMACTYTTQLPMVKVARRWSFTHSGERIRKQEFADSLPQASIQDLGVILMGAGYEVFTKG
PSLYAFKGLAGRYAPIGVHLAMLFIMAGATLSATGSFKGSVDVPQGLNFVIGDVMKPRGV
LSVAPDVFNTEVHVNRFYMEYYDSGEVSQFYSDLSLFNLDGKEVMRKTIKVNDPLRYGGV
TIYQTDWGFSALQVKKNGEGPFNLAMAPLKLNGDKKLFGTFLPLEDSDSSNPNVKGISML
ARDLQSIVLYDQDGKFVGVRRPSSKLPIEINGNEILIEDAIGSTGLDLKTDPGVPIVYAG
FGALMLTTCISYLSHSQIWALQDGSTVVVGGKTNRAKLEFSEEMNRLLDKVPELISADEN
LLDTKSTAT

Transcript Sequence

Transcript ID

Zm00001d034196_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:286308136:286310829:-1 gene:Zm00001d034196 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C-type cytochrome synthesis protein1 description: C-type cytochrome synthesis protein1
Sequence

GCGCGCGACGCCGCATCACTCCCTCGCCACTCGCGCGCCCGGGCTCCTTCCCGCCACGCT
CACGACGATGCCGTCCCCGACGTCCTATCTTCTCCTGAATCCCTCCAAACCCTCCTCCTT
CCGCCGACTCTCGGCCCCGCGCCTGAGCCGGTTCCATGTCTCCTGCGACGCGCCACGGGG
CGGCGGGAGGCGCGAGGTCATCCCCGCCGGTGCCAGCAAGGCCAAGAAACAGATCGTATT
CTTCGACGCCGCCCCGCCGGTGTCCCAGGAGGGTGGAGGCGCCGTGAAGAAGGCGGGGAG
CGAGAAGCTTACCCAGGTGGGCAGCGGCAACGCAGCGCTGGCGTTGTTGAGGAGGGCAAC
CAAGATGACACTCTCGGTGCTGTCCAACCTCCCGCTCGCTATCTCCGAGATGTTCGCCAT
TGCCGCCCTCATGGCTCTAGGAACGGTGATTGACCAGGGAGAGGCACCCAGCTACTACTT
CGAGAAGTTCCCCGAGGACAACCCGGTCTTCGGCTTCATCACGTGGAGGTGGATCCTCAC
CCCCGGGTTCGACCACATGTTCTCCTCGCCAGTCTTCCTCGGCCTCCTTGCGCTCCTCGC
GACGTCCCTCATGGCTTGCACCTACACGACCCAGCTCCCCATGGTCAAGGTCGCAAGAAG
ATGGTCGTTCACACATTCCGGAGAAAGAATACGGAAGCAGGAATTTGCGGACTCGCTTCC
CCAAGCATCCATTCAGGATTTGGGAGTCATCTTGATGGGTGCTGGATATGAGGTATTCAC
CAAGGGTCCATCTTTGTATGCTTTCAAAGGGCTAGCTGGTCGGTATGCGCCTATCGGCGT
GCACTTGGCGATGCTCTTCATCATGGCTGGTGCCACGCTAAGTGCGACAGGAAGCTTTAA
GGGCTCCGTGGATGTGCCTCAAGGGCTGAACTTTGTTATAGGAGATGTCATGAAACCTAG
AGGGGTCCTCTCTGTTGCGCCGGATGTTTTCAATACTGAAGTCCATGTCAACCGGTTCTA
CATGGAGTACTATGACAGTGGAGAGGTCTCACAATTCTACAGTGACCTCTCCCTATTCAA
CCTTGATGGTAAAGAAGTGATGAGAAAGACTATCAAAGTGAACGATCCCCTGAGATACGG
AGGGGTCACCATCTATCAGACAGACTGGGGATTTTCAGCATTGCAAGTGAAGAAAAATGG
TGAAGGCCCTTTCAATTTGGCGATGGCCCCCTTGAAACTGAATGGGGATAAGAAGCTCTT
TGGAACATTCTTGCCACTTGAAGATTCAGACTCGTCGAATCCAAATGTCAAAGGAATATC
AATGCTTGCTCGAGATTTGCAGTCTATTGTGTTGTATGATCAAGATGGTAAGTTTGTAGG
GGTCCGTCGGCCAAGCTCAAAACTGCCTATTGAGATCAATGGCAATGAAATACTCATTGA
AGATGCTATTGGTAGTACTGGACTGGATCTTAAGACTGATCCAGGAGTTCCTATTGTTTA
TGCTGGTTTTGGTGCGCTTATGTTAACGACCTGCATTAGCTATCTTTCACACTCTCAGAT
ATGGGCATTGCAAGATGGAAGTACAGTGGTCGTTGGAGGAAAGACAAATCGAGCCAAACT
TGAATTTTCTGAAGAGATGAACCGGCTACTTGATAAAGTACCAGAGCTGATCAGCGCCGA
TGAGAATCTATTAGATACCAAATCGACAGCCACATGAAACATTTTTTTGTGTGTTTTTGT
TTGGGATTGCTGAAGATGCAGTAGCTCTGTTCAGGTGAACACACGTTCGAATTCACAAAA
CATGGCCTTCAAGAATAGAAAAACTGTTACAATCTT