Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034175_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:285707107:285709046:-1 gene:Zm00001d034175 gene_biotype:protein_coding transcript_biotype:protein_coding description:CCG-binding protein 1
Sequence

ATGCTGTCTCCCACCACACTGCGGCCGCTGGTTCCGGCGGCGGCGCCAGCGCACCTTACC
GCCTGCTTCTTGCCCGCGTCGGGGCGGCGTGCGCCGGCGGCGGCGGTGCGCGCGGTGCGG
AACTACGACTCCATCCCGAAGCGGGAGCCCTTCACCTCCAACCGCAGCACCCTCGACGAG
TTCCTCCGGCTGGACAAGCCGCTCGTCCAGCGTACCAAGGACCAGATCACAGAATGTTCT
GGTGAACGAGCACAAGAAGAAAATGTTCTGGTCAGAGTGCTGTCCATTGTTTCAGAGGCA
CAAAGCATTTGCAGCGATTATTGCATGACCGTCGAAGGTGACGAATGTTGCAGCTGTTGG
GATGCTTACTTTGAACTGAATAAACTTGAGCGAGAGCTGCCCAAAGAGGAAATCTCAAGG
ATGGTGAAGGACTCAGAGGGTGACGTGAGGTACCTGATCGAGAGCATCCATCATCGCTCA
GATTTGCGGAAGAAGATAGCAGAGAAATCTCGTAATTCAGTACCATCAGGCTCCCAGGGG
CAAACTGCAAAGCCAAGGCCGTTCCCCGTGCCTGATGGGATACCGAAAACACAGGAAGAG
CTCACCGAAGAAGAGGAGGCGTTGATGCCAGAGTCTCCATACACAAGGTTGCTGAGAAGG
ATGGGTAGATACCCTGAATGGTACACCCCACGCCCTGATCATGAGACTGACTGA

Peptide Sequence

PEP ID

Zm00001d034175_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:285707107:285709046:-1 gene:Zm00001d034175 transcript:Zm00001d034175_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:CCG-binding protein 1
Sequence

MLSPTTLRPLVPAAAPAHLTACFLPASGRRAPAAAVRAVRNYDSIPKREPFTSNRSTLDE
FLRLDKPLVQRTKDQITECSGERAQEENVLVRVLSIVSEAQSICSDYCMTVEGDECCSCW
DAYFELNKLERELPKEEISRMVKDSEGDVRYLIESIHHRSDLRKKIAEKSRNSVPSGSQG
QTAKPRPFPVPDGIPKTQEELTEEEEALMPESPYTRLLRRMGRYPEWYTPRPDHETD

Transcript Sequence

Transcript ID

Zm00001d034175_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:285707107:285709046:-1 gene:Zm00001d034175 gene_biotype:protein_coding transcript_biotype:protein_coding description:CCG-binding protein 1
Sequence

ATTTCGCTGACGCGAAAAAAAATCAACTGATTCGCTGAAAAACGGAGAATCGAAAGCGAA
TGCTGTCTCCCACCACACTGCGGCCGCTGGTTCCGGCGGCGGCGCCAGCGCACCTTACCG
CCTGCTTCTTGCCCGCGTCGGGGCGGCGTGCGCCGGCGGCGGCGGTGCGCGCGGTGCGGA
ACTACGACTCCATCCCGAAGCGGGAGCCCTTCACCTCCAACCGCAGCACCCTCGACGAGT
TCCTCCGGCTGGACAAGCCGCTCGTCCAGCGTACCAAGGACCAGATCACAGAATGTTCTG
GTGAACGAGCACAAGAAGAAAATGTTCTGGTCAGAGTGCTGTCCATTGTTTCAGAGGCAC
AAAGCATTTGCAGCGATTATTGCATGACCGTCGAAGGTGACGAATGTTGCAGCTGTTGGG
ATGCTTACTTTGAACTGAATAAACTTGAGCGAGAGCTGCCCAAAGAGGAAATCTCAAGGA
TGGTGAAGGACTCAGAGGGTGACGTGAGGTACCTGATCGAGAGCATCCATCATCGCTCAG
ATTTGCGGAAGAAGATAGCAGAGAAATCTCGTAATTCAGTACCATCAGGCTCCCAGGGGC
AAACTGCAAAGCCAAGGCCGTTCCCCGTGCCTGATGGGATACCGAAAACACAGGAAGAGC
TCACCGAAGAAGAGGAGGCGTTGATGCCAGAGTCTCCATACACAAGGTTGCTGAGAAGGA
TGGGTAGATACCCTGAATGGTACACCCCACGCCCTGATCATGAGACTGACTGAATCAAGT
CATCTACCATCCAGGTGTCCCTTTTGGAAGTTTTGCAGCATGATAATCTGAAGCTGAAGC
TCGTTTTATGGTATGTGGTAATATTTTAGTGTTGCACCTATGCTGCTATGCAGATTAGAC
TTGTCCTTTTCTACTTATTAATGAAAACCGGTGTGTGCGGTTTATGCTGTAAATACCTGG
AGTGTTCAGAATATGTTTTGTTCGAGGTTCTGTGTACTGAAGTACGGAGTACTAATGAAT
TTCCTTGTACATAACATCGAATAAAATCACTGGGTTTTACTTTGGTTTCTGG