Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034111_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:284233964:284235433:1 gene:Zm00001d034111 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat protein
Sequence	ATGGGTGGCTTCCACTTCCACCACACCTGGTTCAAGGCACGCAAGGTGTTTGTAAGAATG CTTAGCAATGGAGGCGGTGCCAGCATGGCCTGTGATATCTCGGTGGACGCCTCGGACCTC TCCAAGCGCCTCTGCAAGCTCATCATCTCCTGCCGGAAGGCATCCGCCCTCGAGCACGAG CTCGACCATAGCGGCGTCCGCGTTACGCCGGAGATCGCGGAGAGCGTCCTCAAGCACCTC GACAACGCTGGTATGCTCGCGTACCGCTTCTTCGAGTGGGCGCGCAAGCAGAAGCGTGGG GTGTGTGCTCATACCGTGCGTTCCTACCACACGGTGGTTACGTCCCTAGCCAAGATCAGG CAGTACCAACTCATGTGGGACGTCGTGGCCATCATGCGCAAGGAGGGTGTGGCCAATGTT GAGACGTTCGGGATCATCATGCGCAAATATGCCAGGGCACAGAAGTTGGATGAGGCAGTT TACACGTTCAACGTCATGGAGAAATATGGTGTTGCCCACAACCTCGCTGCCTTCAACAGC TTGCTCAGTGCACTATGCAAATCTAAGAACGTGCGCAAGGCGCAGGAGATCTTTGATAAG ATGAATAATCGGTTCAGTCCTGATGCCAAGACCTATAGTATCTTGCTTGAGGGTTGGGGG AGAGCGCCCAGCCTCCCAAAGATGCGAGAGGTTTACAGTGATATGCTTGCCGCTGGTTGC CAGCCTGACATTGTCACATATGGTATCATGGTCGATGCACTCTGCAAGACAGGCCGAGTT GAAGAGGCTGTCTGTGTCGTGCAGGACATGAGCTCTAGGGGATGCCAACCGACAACCTTC ATATACAGCATCTTAGTGCATACTTATGGAGTTGATATGAGGATTGAGGATGCTGTTGCA GCATTTTTGGATATGGAGAAGGATGGGATTATGCCTGATGTTGTTGTGTACAATGCGCTC ATCACTGCCTTCTGCAAAGTGAAGAAGTTTGAGAATGCCTTCAGAGTCATGGATGACATG CAAGGCCATGGAATCTCCCCAAATTCAAGGACCTGGAACATCATCCTAAATACTCTGATT AGCCTTGGAAAGGATGATGAGGCATATAGGGTCTTCCGCAGCATGATTAAGCGCTGCAAA CCAGACTCTGATACTTACACCATGATGATAAAGATGTTCTGTGAGAATGATAAGATAGAG ATGGCACTGAAGGTATGGAAGTATATGCGATTGAAGCAGTTCTTGCCGAGCATGCACACA TTCTCTGTGCTGATCAATGGTCTCTGTGACAAGGGTGAAGTTAGCCAAGCTTGTGTCCTG CTTGAAGATATGATCGAGAAGGGCATTAGACCTCCTGGTTCAACTTTTGGCAAGCTGAGG CAGCTACTTTTAAAAGAAGGGAGGAAGGATGTGCTTGACTTTCTTGTCGAGAAAATGAAG ATCCTCGCTCAAGAACCTTTGTTTGATTGA

Peptide Sequence

PEP ID	Zm00001d034111_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:284233964:284235433:1 gene:Zm00001d034111 transcript:Zm00001d034111_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat protein
Sequence	MGGFHFHHTWFKARKVFVRMLSNGGGASMACDISVDASDLSKRLCKLIISCRKASALEHE LDHSGVRVTPEIAESVLKHLDNAGMLAYRFFEWARKQKRGVCAHTVRSYHTVVTSLAKIR QYQLMWDVVAIMRKEGVANVETFGIIMRKYARAQKLDEAVYTFNVMEKYGVAHNLAAFNS LLSALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGC QPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVA AFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLI SLGKDDEAYRVFRSMIKRCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHT FSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLDFLVEKMK ILAQEPLFD

Transcript Sequence

Transcript ID	Zm00001d034111_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:284233964:284235433:1 gene:Zm00001d034111 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat protein
Sequence	ATGGGTGGCTTCCACTTCCACCACACCTGGTTCAAGGCACGCAAGGTGTTTGTAAGAATG CTTAGCAATGGAGGCGGTGCCAGCATGGCCTGTGATATCTCGGTGGACGCCTCGGACCTC TCCAAGCGCCTCTGCAAGCTCATCATCTCCTGCCGGAAGGCATCCGCCCTCGAGCACGAG CTCGACCATAGCGGCGTCCGCGTTACGCCGGAGATCGCGGAGAGCGTCCTCAAGCACCTC GACAACGCTGGTATGCTCGCGTACCGCTTCTTCGAGTGGGCGCGCAAGCAGAAGCGTGGG GTGTGTGCTCATACCGTGCGTTCCTACCACACGGTGGTTACGTCCCTAGCCAAGATCAGG CAGTACCAACTCATGTGGGACGTCGTGGCCATCATGCGCAAGGAGGGTGTGGCCAATGTT GAGACGTTCGGGATCATCATGCGCAAATATGCCAGGGCACAGAAGTTGGATGAGGCAGTT TACACGTTCAACGTCATGGAGAAATATGGTGTTGCCCACAACCTCGCTGCCTTCAACAGC TTGCTCAGTGCACTATGCAAATCTAAGAACGTGCGCAAGGCGCAGGAGATCTTTGATAAG ATGAATAATCGGTTCAGTCCTGATGCCAAGACCTATAGTATCTTGCTTGAGGGTTGGGGG AGAGCGCCCAGCCTCCCAAAGATGCGAGAGGTTTACAGTGATATGCTTGCCGCTGGTTGC CAGCCTGACATTGTCACATATGGTATCATGGTCGATGCACTCTGCAAGACAGGCCGAGTT GAAGAGGCTGTCTGTGTCGTGCAGGACATGAGCTCTAGGGGATGCCAACCGACAACCTTC ATATACAGCATCTTAGTGCATACTTATGGAGTTGATATGAGGATTGAGGATGCTGTTGCA GCATTTTTGGATATGGAGAAGGATGGGATTATGCCTGATGTTGTTGTGTACAATGCGCTC ATCACTGCCTTCTGCAAAGTGAAGAAGTTTGAGAATGCCTTCAGAGTCATGGATGACATG CAAGGCCATGGAATCTCCCCAAATTCAAGGACCTGGAACATCATCCTAAATACTCTGATT AGCCTTGGAAAGGATGATGAGGCATATAGGGTCTTCCGCAGCATGATTAAGCGCTGCAAA CCAGACTCTGATACTTACACCATGATGATAAAGATGTTCTGTGAGAATGATAAGATAGAG ATGGCACTGAAGGTATGGAAGTATATGCGATTGAAGCAGTTCTTGCCGAGCATGCACACA TTCTCTGTGCTGATCAATGGTCTCTGTGACAAGGGTGAAGTTAGCCAAGCTTGTGTCCTG CTTGAAGATATGATCGAGAAGGGCATTAGACCTCCTGGTTCAACTTTTGGCAAGCTGAGG CAGCTACTTTTAAAAGAAGGGAGGAAGGATGTGCTTGACTTTCTTGTCGAGAAAATGAAG ATCCTCGCTCAAGAACCTTTGTTTGATTGA