Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034080_T032
CDS Infomation

cds chromosome:B73_RefGen_v4:1:283563455:283579999:1 gene:Zm00001d034080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGGCAAAAGTTGAAGGGGAAAGCTATATGCCTGGATATTATGCCACAGGGGATCTC
AACGTGGAAGCAAGTGGTAGGTGGTCTCCATACTATGAGGAGATGACATCAAATGGCCAG
TTATGCAATGGCTTCGCAACAAAACCAACAAGTGGTTATTCAGAATTTGACAAAGAAATA
CTCAAGCATCAAATTCTTGAACATGAAGCTGTGTTCAGACAACAGGTGTATGAACTGCAC
CGAGTTTACAAAATACAGAAGGATATGATGAAACAACATCAAAGAAAAGAGGTATATTCA
TACCCAACTTTGGCAGGTGCATCACATACTAATTCACCATCACAAGTGCCACCAAACGGT
GCAAAGATGATGTGGCAGATGCCAGTTCCTCCTGTGTCTACAACATACAGGAAAGCTATT
GGAGAGCATAATGATACAAACCAGTCCTGCATGAAGTTCCTTAGAGAAGGCAGTGTGCAG
TCTTCTCCAAATGGATTTCTATCAAGTGATGCTGCTCCAAGAACCAGACAAGGCACTTTT
GACCTTCAACTTCCAGCCGATCATTATATAGATGACGATGACACATCAGATAACAAGCCC
ATAGATTTCCTTGGTTTGGCATCAGATGCAAAACCCCAGAATGATGCTGAGCTTACATTA
GTTAGTGCAGAACGCTTGGGCAAGTTCAGTGATAATAGTTCATCCTCAGGTTTGCGGACT
ACAAATAATCTTGGAAGCCGACAAGTTACCAACCTGAATGAATCAAATACTGGCTTCTTT
ATGGGTAGAGCAAATGGATCTGTTTCCAGAGGCCTTCCGCATACCCTCGAGAACTCGTGG
CACCAACCGATATTGAGATCAAGCACAACTACTTTCAATTTCAGTAAAGAATACTCCAAA
GAAAAGCACACAAATGAAGGTACAAGCTCAAATTTTTTTGACACAAGTGCGAAACTAACA
CATGACGACAAGCCAACAATCAATAAAGGTAAACAAGTCAGCAGTATAACTTTTTTAGCA
CCCAGATATAATGATGCTGATCCCCCAAAATACTTCAAAGCTGCTGATGGGAGGCCTGCC
AGTTATAACCAATTTCTTTACCAAGGTCAGAATAGTTCAGCTGGATGGATTGCACGAAGT
CCTCTGGAACCTTCTGTTATCAATAATTTTGCTAGAGTTGACCGTCCACATCATTCGAAT
CTGGGTACATTTACTGTCCCCATCTCTATTCCTCAAATAGACAATCCTTCAATTGTCTCC
CCGATGGGTTCTTGCACAGCAGACCCAAGGAGCAGCATTGTCAACAATCCTGCTTTAATT
CCAAGATTCAATGGGTCGTCAACCGTGAATTCGTACGCCAGTCTTAGTGCTGTGACACAG
AGCATTGGAACTTCAATCCCAAAGCTGAAAAATGTGGATAACTTAGATAAACGCTATCCT
GGTTTTCCACTTGATTCGTTTTCTGTGTCCCACTCACGACATCAGGTAGCAATTTCAAGT
AACCTGGAGCAAAAGAACTCCCAGAAGTTTGAAGATTCAGATCAACAGTCCCATGGCAAG
GGTATGAAGAACTTCAATTTGAATGAGACACTGTCAGATTGTCAGGAAGATGGTCTTGTA
GAACAAGATGGGAGATGTGCTGCCAGTTTTCAGCATGGTAAAGACGGAGGGTCAGTATTC
GGGATCTCTTGGCTCAAAAATAAAGCTGTGTCTGCTGATCCAACAGCTTTGGAGAAGGCA
GGGAAGATTTTTGGCCATTCGTTTGGAACTACAATGGAGCTGAAAAATGCTAAAGACCAG
AACGAACCAGCTGTGACTATTCGAAATTTGTCAGACTCTGCTTCGACATCTCTTGGCTGT
GGAATTAAGAAGGATGGGCCTTCAGAAGACATTGCCACTGGAACTTTGCTGGTTTGTAAT
AAAGCCCAAGAGGACGCTACATGTTTACCCCTTTCATGCCAGAAACATGTGCCTAAAGAT
GGACAAGATGCTGATGGAGTCATCAAGATAAGTGGTGCCTCCATCAGGAATTTCATCGAT
CTCAATGATGCTGTGCCAAACGATGACAATTCTGAAGAATCAGTAGTGTCACATGAATGC
CAGGCGGAACCTTCACGGAACAACCATCCTAAACGAGCATTTGTGATTGATCTAGAGGTG
CCGGCTTGTGAAGAGGATGCTGCTTGGGATTTTGATCAAGAATGTGCACAGCCTAAACCT
GATGCACACCAGGAAGTTGACGGCAGATCTGATACATCTGCTCTAGCTGCAGCTGAGAAC
ATCGTAGCGTTGTCAAGGATTATTCCAACAGCTCTAGAGGCATCTGATGATATGTTGCAG
TGGTTTGCAGATCTCGCTGTATTGAACATCAAGGACCTTGCTGAGCAAGCTGAACTCCAA
GCTTGTACCAATGATTCCAGTAACGACGAGTCAGATTCATTCGAATCCTTGACACTGAAG
CTGGAAGAGACCAAGATTGATGAGTACTGGAGCAGGCCACTGGAACCTGAAATCACAACC
GATGAACAATTAATTTCAACTGCTCACCTTCTCACCAAGCCCAGAAGGGGCCAGCAAAGG
AGGCGACGGCAGAAGCGGGATTTCCAGAAAGATATCTTGCCTGGCCTTTCGTCACTTTCC
CGGCCTGAAATCATAGAGGATGTCCAGTTGCTTGAGGGGTTAGTCCAGGCTTCTGGTGGA
TCCTGGGAGTCGAGTTTAACTAGGCGAGGACGTTATGGTGGGCGGACTCGAGGTAGGAAA
CCTCGGAAAACTGTAGTAACTGTAATTGTAGAAGAGGAGGTCGAGGTTAGCCCACCGCCG
AAACCTGTTGGCACTGGCGACCTCGAAGCCGATGGTAGGGGTATGGTTGGATGGGGCAGA
ACAACAAGGCGGTGTCGCAGAGCGAGATGTCCGTCAGGTAACAACTTGGCTGCTGCGTCT
TGA

Peptide Sequence

PEP ID

Zm00001d034080_P032
PEP Infomation

pep chromosome:B73_RefGen_v4:1:283563455:283579999:1 gene:Zm00001d034080 transcript:Zm00001d034080_T032 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGAKVEGESYMPGYYATGDLNVEASGRWSPYYEEMTSNGQLCNGFATKPTSGYSEFDKEI
LKHQILEHEAVFRQQVYELHRVYKIQKDMMKQHQRKEVYSYPTLAGASHTNSPSQVPPNG
AKMMWQMPVPPVSTTYRKAIGEHNDTNQSCMKFLREGSVQSSPNGFLSSDAAPRTRQGTF
DLQLPADHYIDDDDTSDNKPIDFLGLASDAKPQNDAELTLVSAERLGKFSDNSSSSGLRT
TNNLGSRQVTNLNESNTGFFMGRANGSVSRGLPHTLENSWHQPILRSSTTTFNFSKEYSK
EKHTNEGTSSNFFDTSAKLTHDDKPTINKGKQVSSITFLAPRYNDADPPKYFKAADGRPA
SYNQFLYQGQNSSAGWIARSPLEPSVINNFARVDRPHHSNLGTFTVPISIPQIDNPSIVS
PMGSCTADPRSSIVNNPALIPRFNGSSTVNSYASLSAVTQSIGTSIPKLKNVDNLDKRYP
GFPLDSFSVSHSRHQVAISSNLEQKNSQKFEDSDQQSHGKGMKNFNLNETLSDCQEDGLV
EQDGRCAASFQHGKDGGSVFGISWLKNKAVSADPTALEKAGKIFGHSFGTTMELKNAKDQ
NEPAVTIRNLSDSASTSLGCGIKKDGPSEDIATGTLLVCNKAQEDATCLPLSCQKHVPKD
GQDADGVIKISGASIRNFIDLNDAVPNDDNSEESVVSHECQAEPSRNNHPKRAFVIDLEV
PACEEDAAWDFDQECAQPKPDAHQEVDGRSDTSALAAAENIVALSRIIPTALEASDDMLQ
WFADLAVLNIKDLAEQAELQACTNDSSNDESDSFESLTLKLEETKIDEYWSRPLEPEITT
DEQLISTAHLLTKPRRGQQRRRRQKRDFQKDILPGLSSLSRPEIIEDVQLLEGLVQASGG
SWESSLTRRGRYGGRTRGRKPRKTVVTVIVEEEVEVSPPPKPVGTGDLEADGRGMVGWGR
TTRRCRRARCPSGNNLAAAS

Transcript Sequence

Transcript ID

Zm00001d034080_T032
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:283563455:283579999:1 gene:Zm00001d034080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCAGGTAATTTCTCGCGAGCGCATTCAGCACAGCAGGTTACTATTGGCTGCTCGTCCACT
TAAGCAGGTTGAGGTATCCATTTGGTTCGACACAGTGAAGAACTGAAGATACGCATTGTG
CTTGCTTGTCTTGCGGGGCTCACAAACATCCTGCTGGTGTGCTGTGCTGGGAAGGTCACA
TAATCCACTTGGCTATATGCCGGGGTGGGAATGTGAATCGGGGCTTCATTAGTGCAGGCA
GCAGGCTTGTTAACTTGTTTTGCAACAAGCATGGGGGCAAAAGTTGAAGGGGAAAGCTAT
ATGCCTGGATATTATGCCACAGGGGATCTCAACGTGGAAGCAAGTGGTAGGTGGTCTCCA
TACTATGAGGAGATGACATCAAATGGCCAGTTATGCAATGGCTTCGCAACAAAACCAACA
AGTGGTTATTCAGAATTTGACAAAGAAATACTCAAGCATCAAATTCTTGAACATGAAGCT
GTGTTCAGACAACAGGTGTATGAACTGCACCGAGTTTACAAAATACAGAAGGATATGATG
AAACAACATCAAAGAAAAGAGGTATATTCATACCCAACTTTGGCAGGTGCATCACATACT
AATTCACCATCACAAGTGCCACCAAACGGTGCAAAGATGATGTGGCAGATGCCAGTTCCT
CCTGTGTCTACAACATACAGGAAAGCTATTGGAGAGCATAATGATACAAACCAGTCCTGC
ATGAAGTTCCTTAGAGAAGGCAGTGTGCAGTCTTCTCCAAATGGATTTCTATCAAGTGAT
GCTGCTCCAAGAACCAGACAAGGCACTTTTGACCTTCAACTTCCAGCCGATCATTATATA
GATGACGATGACACATCAGATAACAAGCCCATAGATTTCCTTGGTTTGGCATCAGATGCA
AAACCCCAGAATGATGCTGAGCTTACATTAGTTAGTGCAGAACGCTTGGGCAAGTTCAGT
GATAATAGTTCATCCTCAGGTTTGCGGACTACAAATAATCTTGGAAGCCGACAAGTTACC
AACCTGAATGAATCAAATACTGGCTTCTTTATGGGTAGAGCAAATGGATCTGTTTCCAGA
GGCCTTCCGCATACCCTCGAGAACTCGTGGCACCAACCGATATTGAGATCAAGCACAACT
ACTTTCAATTTCAGTAAAGAATACTCCAAAGAAAAGCACACAAATGAAGGTACAAGCTCA
AATTTTTTTGACACAAGTGCGAAACTAACACATGACGACAAGCCAACAATCAATAAAGGT
AAACAAGTCAGCAGTATAACTTTTTTAGCACCCAGATATAATGATGCTGATCCCCCAAAA
TACTTCAAAGCTGCTGATGGGAGGCCTGCCAGTTATAACCAATTTCTTTACCAAGGTCAG
AATAGTTCAGCTGGATGGATTGCACGAAGTCCTCTGGAACCTTCTGTTATCAATAATTTT
GCTAGAGTTGACCGTCCACATCATTCGAATCTGGGTACATTTACTGTCCCCATCTCTATT
CCTCAAATAGACAATCCTTCAATTGTCTCCCCGATGGGTTCTTGCACAGCAGACCCAAGG
AGCAGCATTGTCAACAATCCTGCTTTAATTCCAAGATTCAATGGGTCGTCAACCGTGAAT
TCGTACGCCAGTCTTAGTGCTGTGACACAGAGCATTGGAACTTCAATCCCAAAGCTGAAA
AATGTGGATAACTTAGATAAACGCTATCCTGGTTTTCCACTTGATTCGTTTTCTGTGTCC
CACTCACGACATCAGGTAGCAATTTCAAGTAACCTGGAGCAAAAGAACTCCCAGAAGTTT
GAAGATTCAGATCAACAGTCCCATGGCAAGGGTATGAAGAACTTCAATTTGAATGAGACA
CTGTCAGATTGTCAGGAAGATGGTCTTGTAGAACAAGATGGGAGATGTGCTGCCAGTTTT
CAGCATGGTAAAGACGGAGGGTCAGTATTCGGGATCTCTTGGCTCAAAAATAAAGCTGTG
TCTGCTGATCCAACAGCTTTGGAGAAGGCAGGGAAGATTTTTGGCCATTCGTTTGGAACT
ACAATGGAGCTGAAAAATGCTAAAGACCAGAACGAACCAGCTGTGACTATTCGAAATTTG
TCAGACTCTGCTTCGACATCTCTTGGCTGTGGAATTAAGAAGGATGGGCCTTCAGAAGAC
ATTGCCACTGGAACTTTGCTGGTTTGTAATAAAGCCCAAGAGGACGCTACATGTTTACCC
CTTTCATGCCAGAAACATGTGCCTAAAGATGGACAAGATGCTGATGGAGTCATCAAGATA
AGTGGTGCCTCCATCAGGAATTTCATCGATCTCAATGATGCTGTGCCAAACGATGACAAT
TCTGAAGAATCAGTAGTGTCACATGAATGCCAGGCGGAACCTTCACGGAACAACCATCCT
AAACGAGCATTTGTGATTGATCTAGAGGTGCCGGCTTGTGAAGAGGATGCTGCTTGGGAT
TTTGATCAAGAATGTGCACAGCCTAAACCTGATGCACACCAGGAAGTTGACGGCAGATCT
GATACATCTGCTCTAGCTGCAGCTGAGAACATCGTAGCGTTGTCAAGGATTATTCCAACA
GCTCTAGAGGCATCTGATGATATGTTGCAGTGGTTTGCAGATCTCGCTGTATTGAACATC
AAGGACCTTGCTGAGCAAGCTGAACTCCAAGCTTGTACCAATGATTCCAGTAACGACGAG
TCAGATTCATTCGAATCCTTGACACTGAAGCTGGAAGAGACCAAGATTGATGAGTACTGG
AGCAGGCCACTGGAACCTGAAATCACAACCGATGAACAATTAATTTCAACTGCTCACCTT
CTCACCAAGCCCAGAAGGGGCCAGCAAAGGAGGCGACGGCAGAAGCGGGATTTCCAGAAA
GATATCTTGCCTGGCCTTTCGTCACTTTCCCGGCCTGAAATCATAGAGGATGTCCAGTTG
CTTGAGGGGTTAGTCCAGGCTTCTGGTGGATCCTGGGAGTCGAGTTTAACTAGGCGAGGA
CGTTATGGTGGGCGGACTCGAGGTAGGAAACCTCGGAAAACTGTAGTAACTGTAATTGTA
GAAGAGGAGGTCGAGGTTAGCCCACCGCCGAAACCTGTTGGCACTGGCGACCTCGAAGCC
GATGGTAGGGGTATGGTTGGATGGGGCAGAACAACAAGGCGGTGTCGCAGAGCGAGATGT
CCGTCAGGTAACAACTTGGCTGCTGCGTCTTGAGAAAGGGTATTGCCAGCAAGCATTGGA
CCTGATTAGGTACTTGGTGGTTCACAATTGTTATAGACTCCGATGGATGGACTGGTATAA
GGTGATCACAGTCATGAGTGTACATACTCTGTCGGCGTATTGGCCTCACCCCAACTTTCA
TGCTTTTGGGTTGAAACATGGTTTACGTTCTTATAATAAGTTCCGTAAATTAGCTGGTAA
GACATTTCTGCGACAGCATTGTATTAAGCTGTTCCAGGTTATGAGGTCCGGTATAAATTC
ATTGTGAGAAAAAAAACTGCAATGCCTGTAAACCACCTTGATCTCTGAAGATTAGCTCAT
CGCATGCGCAACAAAGGGTGTGAAAGACTTCGGGTCTGTATTCTTTTTTAGCTTATATAT
GCTCTGCCTAATTGGCTAGTACATATTCAGTATCCGAAATGCCCATTTATTTTTGTTTAG
ATACTGATTGGAAGCACCCAAATTTTAAGAACCTGTTTTATGAAAATTAAGGTGGTTCCA
AACATAATAGTTTATATCCCAGTCTGTCTATAGAAACTGAATTCTTTCTTAAAAAAACTA
GAAACTAGTCTCCTAACTAAAACCTGTTTATGAAAATTATGGTGGTTCCAAACACTATTA
ACTAGTTTTTTTATAAACCAGTTTTTAAAAATTAGAGATAGAAATTAGATTCTTAAAAAA
ACATATCGATTTATATATCAGTTTATAGGAATTAGATTCTCATTTTCTTAAAAACCAAGA
AGCTGGTCTAAAAAATAAAAACTGGTTTTTTAAAAACTAGGTCCAGGTCGCATCCCAATG
TTTCCGTTCCCTTTCGGCCTGCATATGCTTCTGCTATATATATGGCGGATGTTGTATTTG
TTCAAATATTCGTCAAACTCCATTAATGAAAATAATTCAGAACTACCGGTAACTAATCTC
ACGGTTTTTATTGTTTTGGAAAACACGACAACTAATCATTGGTACCGGAGGCCCTGAACT
ACTGGGCCTAATCCGATTCAATATCTCGGCCCACGATGCAACGGGTGATCAGTTTTTCCC
GTTCGAATTTCGGAGCCCTCCTCTCCTCCCCGCTCCAGCGCCCCTGCAGTTCTCGCTCCA
CTGACAGCTCGCCGAGGGGCCGCGCCGCGCTCGAGACCCGTCGATGGCGAGGCGGAGCCT
GGCGGTCGACGCAACCGCAGGCGCCGCATCCCGGGTTCGGTTCGCGCCCACCTCCAATAA
CCTGCTCGTCTCCTCATGGGATTCGGGGCTGCGGTTGTACGATGCCGACGAGGGCACGCT
CAGGGTCAACGTGGAGTCAGAGGCGGCATTCCTCGACTGCTGCTTCGAGGATGAGTCTGC
AGCGTTTGCCTGCGGCTCTGATGGATCTGTGAGAAGGTACGACTTCCACTCAGGTTCGCA
GGATACGGTGGGGCTCCATGAAGATGCACTAGCCTGCATTGAGTTCTCTTCACTGACCGG
TCAGATTATGACAGGCAGCCTTGACAAGAAGCTAAAGCTTTGGGATTCAAAAACAAGAAA
TGTAAGCCCGAGCGGCACCATAACCTTAAATTCAGATGTGGCCTCAATTTCTATATGCGG
CATTTACATATTAGCTGCAGTTGAGAGAAATGTTTATCTTTATGACATGAGGAATCTAAC
AAGACCAGTTGATGAAAAAGACTGTCCTCTGGATTATCAAATTCGATGCCTTCATACTTC
TCTAGAGTGGAATGCTTATGTTGCTGGCTCTGTGGATGGAGTTGTTGCATTGAAGTATCT
TGATCGTGGAACAGATAGAGATTTGGGATATGCATTTCGTTGTCATCCAAATTCCAGAAA
CGGAAAATGGAATCTGGTCCCTGTAAATTGCATCTCAGTTCATCCCTGCAACAGAACTTT
CGTTACGGGAGATGATAAAGGATGCACTATTGTTTGGGATGCTCAATTGAAAAAGAAGCT
GATTGAGCTTCCAATGTATTTGGGCAGTGTGGCGTCAGTGGCATACAACCATAATGGCCA
ACTTCTGGCGGTTGCCTCAAACTATTTTTTAGAAGTGGATAAAGAGGAGCAACACCACCA
GGTATTCATTGAAACTGTGGAGAACTTCAAAGGCAAGTCCCGTGTGGGATAGAGCCTTCT
AACAAAACATGTTCTGTTCATCTGTTGTATTGTATTTTGTCTACCATACATGTTAAAGGT
CACCAAGATGTGACAGCATGTTGTATTATGTTGTATGACTAAGCATTTTTTTTAGGAAAC
GACATAATATGGCTAAGCAATACTTGTATATATTGGTTACATCTAGTCTGAGACAGCTGT
GGTGTGTTGTAACTCTTTTGAGCTTTTGCAACCAGTATTGCTGTTCTGGACTTCTGGTAA
CCGCAGCTATCCCTG