Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034074_T034
CDS Infomation

cds chromosome:B73_RefGen_v4:1:283225418:283229958:-1 gene:Zm00001d034074 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:starch phosphorylase1 description: starch phosphorylase1
Sequence

ATGGCGACGACCACCTCGCCGCCGCTGCAGCTCGCCAGCGCCTCCCGCCCGCACGCCTCC
GCCTCCGGTGGTGGCGGCGGAGGTGGGGTTCTCCTCGCTGGCGGTTCCGGAGGTGGGGTC
GCGCCAGGTTGGGGTCGAGGGCGATTGCAGCGGCGGGTGTCAGCGCGCAGCGTGGCGAGC
GATCGGGACGTGCAAGGCCCCGTCTCGCCCGCGGAAGGGCTTCCAAGTGTGCTAAACTCC
ATCGGCTCATCTGCCATTGCATCAAACATCAAGCACCATGCAGAGTTCGCTCCCTTGTTC
TCTCCAGATCACTTTTCTCCCCTGAAAGCTTACCATGCGACTGCTAAAAGTGTCCTTGAT
GCGCTGCTGATAAACTGGAATGCGACATATGATTATTACAACAAAATGAATGTAAAACAA
GCATATTACCTGTCCATGGAGTTTTTACAGGGAAGGGCTCTCACAAATGCTATTGGCAAT
CTAGAGATTACCGGTGAATATGCAGAAGCATTAAAACAACTTGGACAAAACCTGGAGGAT
GTCGCTAGCCAGGAACCAGATGCTGCCCTGGGCAATGGTGGTTTAGGCCGCCTGGCTTCT
TGTTTTTTGGATTCTTTAGCAACATTAAATTATCCAGCATGGGGATATGGACTTCGCTAT
GAATATGGCCTCTTTAAGCAGATCATAACAAAGGATGGTCAGGAGGAGATTGCTGAGAAT
TGGCTTGAGATGGGATATCCTTGGGAGGTTGTAAGAAATGATGTCTCTTATCCTGTGAAA
TTCTATGGTAAAGTGGTGGAAGGCACTGATGGTAGGAAGCACTGGATTGGAGGAGAAAAT
ATCAAGGCTGTGGCACATGATGTCCCTATTCCTGGCTACAAAACTAGAACTACCAATAAT
CTGCGTCTTTGGTCAACAACTGTACCAGCACAAGATTTTGACTTGGCAGCTTTTAATTCT
GGAGATCATACCAAGGCATATGAAGCTCATCTAAACGCTAAAAAGATATGCCACATATTG
TATCCTGGGGATGAATCACTAGAGGGGAAAGTTCTCCGCTTGAAGCAACAATATACATTG
TGTTCAGCCTCACTACAGGACATCATTGCTCGTTTTGAGAGTAGAGCTGGCGAGTCTCTC
AACTGGGAGGACTTCCCCTCCAAAGTTGCAGTGCAGATGAATGACACTCATCCAACACTA
TGCATTCCTGAGTTAATGAGAATACTGATGGATGTTAAGGGATTAAGCTGGAGTGAGGCA
TGGAGTATTACAGAAAGAACCGTGGCATACACTAACCATACAGTGCTTCCTGAAGCTCTA
GAGAAGTGGAGCTTGGACATAATGCAGAAACTTTTACCTCGACATGTTGAGATAATAGAA
ACAATTGATGAAGAGCTGATAAACAACATAGTCTCAAAGTATGGAACCACAGATACTGAA
CTGTTGAAAAAGAAGCTGAAAGAGATGAGGATTCTGGATAATGTTGACCTTCCAGCTTCC
ATTTCCCAACTATTTGTTAAACCCAAAGACAAAAAGGAATCTCCTGCTAAATCAAAGCAA
AAGTTACTTGTTAAATCTTTGGAGACTATTGTTGATGTTGAGGAGAAAACTGAGTTGGAA
GAGGAGGCGGAGGTTCTATCAGAGATAGAGGAGGAAAAACTTGAATCTGAAGAAGTAGAG
GCAGAAGAAGAGAGTTCTGAGGATGAGTTAGATCCATTTGTAAAGTCTGATCCTAAGTTA
CCAAGAGTTGTCCGAATGGCAAACCTCTGTGTTGTTGGTGGGCATTCAGTAAATGGTGTA
GCTGAAATTCACAGTGAAATTGTGAAACAGGATGTGTTCAACAGCTTCTATGAGATGTGG
CCAACTAAATTTCAGAATAAAACAAATGGAGTGACTCCCAGGCGTTGGATCCGGTTTTGT
AATCCTGCATTAAGTGCATTAATTTCAAAGTGGATTGGTTCTGATGACTGGGTGCTTAAT
ACAGACAAACTGGCAGAACTGAAGAAGTTTGCTGATAATGAAGATCTGCATTCAGAGTGG
CGTGCTGCTAAGAAGGCTAACAAAATGAAGGTTGTTTCTCTTATAAGGGAGAAGACAGGA
TATATTGTCAGTCCAGATGCAATGTTTGATGTGCAGGTGAAAAGGATACATGAATATAAG
CGGCAGCTGCTAAATATCCTTGGAATTGTCTACCGCTACAAGAAGATGAAAGAAATGAGC
ACAGAAGAAAGAGCAAAGAGCTTTGTTCCAAGGGTATGCATATTCGGTGGGAAAGCATTT
GCCACATATATACAG

Peptide Sequence

PEP ID

Zm00001d034074_P034
PEP Infomation

pep chromosome:B73_RefGen_v4:1:283225418:283229958:-1 gene:Zm00001d034074 transcript:Zm00001d034074_T034 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:starch phosphorylase1 description: starch phosphorylase1
Sequence

MATTTSPPLQLASASRPHASASGGGGGGGVLLAGGSGGGVAPGWGRGRLQRRVSARSVAS
DRDVQGPVSPAEGLPSVLNSIGSSAIASNIKHHAEFAPLFSPDHFSPLKAYHATAKSVLD
ALLINWNATYDYYNKMNVKQAYYLSMEFLQGRALTNAIGNLEITGEYAEALKQLGQNLED
VASQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYEYGLFKQIITKDGQEEIAEN
WLEMGYPWEVVRNDVSYPVKFYGKVVEGTDGRKHWIGGENIKAVAHDVPIPGYKTRTTNN
LRLWSTTVPAQDFDLAAFNSGDHTKAYEAHLNAKKICHILYPGDESLEGKVLRLKQQYTL
CSASLQDIIARFESRAGESLNWEDFPSKVAVQMNDTHPTLCIPELMRILMDVKGLSWSEA
WSITERTVAYTNHTVLPEALEKWSLDIMQKLLPRHVEIIETIDEELINNIVSKYGTTDTE
LLKKKLKEMRILDNVDLPASISQLFVKPKDKKESPAKSKQKLLVKSLETIVDVEEKTELE
EEAEVLSEIEEEKLESEEVEAEEESSEDELDPFVKSDPKLPRVVRMANLCVVGGHSVNGV
AEIHSEIVKQDVFNSFYEMWPTKFQNKTNGVTPRRWIRFCNPALSALISKWIGSDDWVLN
TDKLAELKKFADNEDLHSEWRAAKKANKMKVVSLIREKTGYIVSPDAMFDVQVKRIHEYK
RQLLNILGIVYRYKKMKEMSTEERAKSFVPRVCIFGGKAFATYIQ

Transcript Sequence

Transcript ID

Zm00001d034074_T034
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:283225418:283229958:-1 gene:Zm00001d034074 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:starch phosphorylase1 description: starch phosphorylase1
Sequence

ACGGACACTTCACGCACCTTGCAGTTGCAGCGGCGGTGGCACGGCAACAGGGAGGAGAGA
AGAGTGAGGAACTGAGGATAGAGATATTTTAAGCGCCCCTCGATTTCCTTCGCCTTGTCA
ACTAGCCCTCGCTCATCGCATCGCACGCATCGCACAGACACTCCACTGCACGCGCAGCAA
TGGCGACGACCACCTCGCCGCCGCTGCAGCTCGCCAGCGCCTCCCGCCCGCACGCCTCCG
CCTCCGGTGGTGGCGGCGGAGGTGGGGTTCTCCTCGCTGGCGGTTCCGGAGGTGGGGTCG
CGCCAGGTTGGGGTCGAGGGCGATTGCAGCGGCGGGTGTCAGCGCGCAGCGTGGCGAGCG
ATCGGGACGTGCAAGGCCCCGTCTCGCCCGCGGAAGGGCTTCCAAGTGTGCTAAACTCCA
TCGGCTCATCTGCCATTGCATCAAACATCAAGCACCATGCAGAGTTCGCTCCCTTGTTCT
CTCCAGATCACTTTTCTCCCCTGAAAGCTTACCATGCGACTGCTAAAAGTGTCCTTGATG
CGCTGCTGATAAACTGGAATGCGACATATGATTATTACAACAAAATGAATGTAAAACAAG
CATATTACCTGTCCATGGAGTTTTTACAGGGAAGGGCTCTCACAAATGCTATTGGCAATC
TAGAGATTACCGGTGAATATGCAGAAGCATTAAAACAACTTGGACAAAACCTGGAGGATG
TCGCTAGCCAGGAACCAGATGCTGCCCTGGGCAATGGTGGTTTAGGCCGCCTGGCTTCTT
GTTTTTTGGATTCTTTAGCAACATTAAATTATCCAGCATGGGGATATGGACTTCGCTATG
AATATGGCCTCTTTAAGCAGATCATAACAAAGGATGGTCAGGAGGAGATTGCTGAGAATT
GGCTTGAGATGGGATATCCTTGGGAGGTTGTAAGAAATGATGTCTCTTATCCTGTGAAAT
TCTATGGTAAAGTGGTGGAAGGCACTGATGGTAGGAAGCACTGGATTGGAGGAGAAAATA
TCAAGGCTGTGGCACATGATGTCCCTATTCCTGGCTACAAAACTAGAACTACCAATAATC
TGCGTCTTTGGTCAACAACTGTACCAGCACAAGATTTTGACTTGGCAGCTTTTAATTCTG
GAGATCATACCAAGGCATATGAAGCTCATCTAAACGCTAAAAAGATATGCCACATATTGT
ATCCTGGGGATGAATCACTAGAGGGGAAAGTTCTCCGCTTGAAGCAACAATATACATTGT
GTTCAGCCTCACTACAGGACATCATTGCTCGTTTTGAGAGTAGAGCTGGCGAGTCTCTCA
ACTGGGAGGACTTCCCCTCCAAAGTTGCAGTGCAGATGAATGACACTCATCCAACACTAT
GCATTCCTGAGTTAATGAGAATACTGATGGATGTTAAGGGATTAAGCTGGAGTGAGGCAT
GGAGTATTACAGAAAGAACCGTGGCATACACTAACCATACAGTGCTTCCTGAAGCTCTAG
AGAAGTGGAGCTTGGACATAATGCAGAAACTTTTACCTCGACATGTTGAGATAATAGAAA
CAATTGATGAAGAGCTGATAAACAACATAGTCTCAAAGTATGGAACCACAGATACTGAAC
TGTTGAAAAAGAAGCTGAAAGAGATGAGGATTCTGGATAATGTTGACCTTCCAGCTTCCA
TTTCCCAACTATTTGTTAAACCCAAAGACAAAAAGGAATCTCCTGCTAAATCAAAGCAAA
AGTTACTTGTTAAATCTTTGGAGACTATTGTTGATGTTGAGGAGAAAACTGAGTTGGAAG
AGGAGGCGGAGGTTCTATCAGAGATAGAGGAGGAAAAACTTGAATCTGAAGAAGTAGAGG
CAGAAGAAGAGAGTTCTGAGGATGAGTTAGATCCATTTGTAAAGTCTGATCCTAAGTTAC
CAAGAGTTGTCCGAATGGCAAACCTCTGTGTTGTTGGTGGGCATTCAGTAAATGGTGTAG
CTGAAATTCACAGTGAAATTGTGAAACAGGATGTGTTCAACAGCTTCTATGAGATGTGGC
CAACTAAATTTCAGAATAAAACAAATGGAGTGACTCCCAGGCGTTGGATCCGGTTTTGTA
ATCCTGCATTAAGTGCATTAATTTCAAAGTGGATTGGTTCTGATGACTGGGTGCTTAATA
CAGACAAACTGGCAGAACTGAAGAAGTTTGCTGATAATGAAGATCTGCATTCAGAGTGGC
GTGCTGCTAAGAAGGCTAACAAAATGAAGGTTGTTTCTCTTATAAGGGAGAAGACAGGAT
ATATTGTCAGTCCAGATGCAATGTTTGATGTGCAGGTGAAAAGGATACATGAATATAAGC
GGCAGCTGCTAAATATCCTTGGAATTGTCTACCGCTACAAGAAGATGAAAGAAATGAGCA
CAGAAGAAAGAGCAAAGAGCTTTGTTCCAAGGGTATGCATATTCGGTGGGAAAGCATTTG
CCACATATATACAG