Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034049_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:1:282396213:282398605:-1 gene:Zm00001d034049 gene_biotype:protein_coding transcript_biotype:protein_coding description:Brittle stalk-2-like protein 3

Sequence

ATGGATATGTCGCTGTTGTCACAATGTTTAATTATCAACAATTTCGGCATATCGGCGCAC
CTGGTTGGCAGCTTGGGTGGACATGGGCAAAGAAGGAGGTTATATGGTCAATGGTTGGGG
CTCAGACCACTGAACAGGGCGACTGCTCAAAGTTCAAGAGCAGCCCACCCCATTGCTGCA
AGAAAGATCCAACAATTGTCGATTTACTTCCAGGCACTCCATACAACATGCAAATTGCCA
ATTGCTGCAAGGCAGGACCCAGCAAATGCTGCTTCCTCCTTCCAGATCAGTGTTGGTCTT
GCTGGAACTACCAATAAAACTGTTAAGGTGCCCAGGAACTTCACTCTTAAGACTCCAGGC
CCTGGGTACACATGTGGGCGTGCCATTGTTGGCAGGCCTACGAAGTTTTTCACCGCGGAC
GGGCGCAGGGCAACCCAAGCTCTAATGACATGGAATGTGACCTGCACATATTCCCAATTT
CTTGCTCAGAAGACTCCATCCTGCTGTGTATCTCTATCATCGTTTTATAATGACACAATT
GTGAACTGCCCAACATGCTCATGTGGCTGCCAGAACCCAAGTGGGTCAAACTGTGTGAAT
GAGGATTCACCTAATCTACAAGCTGCAATTGATGGCCCTGGCAAATGGACTGGTCAGCCC
CTTGTACAATGCACTTCCCACATGTGCCCGATAAGAATCCACTGGCATGTGAAGCTCAAC
TACAAGGATTACTGGAGAGTGAAAATCACTATCACAAACTTCAACTTCCGCATGAATTAC
ACGCAGTGGAACTTAGTAGCCCAGCATCCAAACTTTGATAATATCACTCAGTTGTTCAGC
TTCAACTACAAACCACTTACTCCATATGGTGGTGGCATAAATGATACGGCAATGTTCTGG
GGTGTAAAATTCTACAATGATCTGCTGATGCAAGCCGGCAAACTTGGGAATGTGCAATCA
GAGCTGCTTCTCCGCAAGGACTCCCGGACTTTCACTTTCGAAAAGGGATGGGCCTTCCCA
CGCCGAGTTTACTTCAATGGTGATAATTGTGTCATGCCATCTCCTGAAAATTATCCATGG
CTGCCGAATGCAAGCCCTCTAACAAAACCATTGGCACTCCCATTCTTGGTATTCTGGGTT
GCCTTGGCTGCTCTGTTGGCTTATGCATGA

Peptide Sequence

PEP ID

Zm00001d034049_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:1:282396213:282398605:-1 gene:Zm00001d034049 transcript:Zm00001d034049_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Brittle stalk-2-like protein 3

Sequence

MDMSLLSQCLIINNFGISAHLVGSLGGHGQRRRLYGQWLGLRPLNRATAQSSRAAHPIAA
RKIQQLSIYFQALHTTCKLPIAARQDPANAASSFQISVGLAGTTNKTVKVPRNFTLKTPG
PGYTCGRAIVGRPTKFFTADGRRATQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTI
VNCPTCSCGCQNPSGSNCVNEDSPNLQAAIDGPGKWTGQPLVQCTSHMCPIRIHWHVKLN
YKDYWRVKITITNFNFRMNYTQWNLVAQHPNFDNITQLFSFNYKPLTPYGGGINDTAMFW
GVKFYNDLLMQAGKLGNVQSELLLRKDSRTFTFEKGWAFPRRVYFNGDNCVMPSPENYPW
LPNASPLTKPLALPFLVFWVALAALLAYA

Transcript Sequence

Transcript ID

Zm00001d034049_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:282396213:282398605:-1 gene:Zm00001d034049 gene_biotype:protein_coding transcript_biotype:protein_coding description:Brittle stalk-2-like protein 3

Sequence

ATCGCTCTCTGCAGAGGCTTATGATTCGCTGGATCCAAATGGCAACATCACCATAAAATG
GGATATCATGCAGTGGACTCCTGATGGATATGTCGCTGTTGTCACAATGTTTAATTATCA
ACAATTTCGGCATATCGGCGCACCTGGTTGGCAGCTTGGGTGGACATGGGCAAAGAAGGA
GGTTATATGGTCAATGGTTGGGGCTCAGACCACTGAACAGGGCGACTGCTCAAAGTTCAA
GAGCAGCCCACCCCATTGCTGCAAGAAAGATCCAACAATTGTCGATTTACTTCCAGGCAC
TCCATACAACATGCAAATTGCCAATTGCTGCAAGGCAGGACCCAGCAAATGCTGCTTCCT
CCTTCCAGATCAGTGTTGGTCTTGCTGGAACTACCAATAAAACTGTTAAGGTGCCCAGGA
ACTTCACTCTTAAGACTCCAGGCCCTGGGTACACATGTGGGCGTGCCATTGTTGGCAGGC
CTACGAAGTTTTTCACCGCGGACGGGCGCAGGGCAACCCAAGCTCTAATGACATGGAATG
TGACCTGCACATATTCCCAATTTCTTGCTCAGAAGACTCCATCCTGCTGTGTATCTCTAT
CATCGTTTTATAATGACACAATTGTGAACTGCCCAACATGCTCATGTGGCTGCCAGAACC
CAAGTGGGTCAAACTGTGTGAATGAGGATTCACCTAATCTACAAGCTGCAATTGATGGCC
CTGGCAAATGGACTGGTCAGCCCCTTGTACAATGCACTTCCCACATGTGCCCGATAAGAA
TCCACTGGCATGTGAAGCTCAACTACAAGGATTACTGGAGAGTGAAAATCACTATCACAA
ACTTCAACTTCCGCATGAATTACACGCAGTGGAACTTAGTAGCCCAGCATCCAAACTTTG
ATAATATCACTCAGTTGTTCAGCTTCAACTACAAACCACTTACTCCATATGGTGGTGGCA
TAAATGATACGGCAATGTTCTGGGGTGTAAAATTCTACAATGATCTGCTGATGCAAGCCG
GCAAACTTGGGAATGTGCAATCAGAGCTGCTTCTCCGCAAGGACTCCCGGACTTTCACTT
TCGAAAAGGGATGGGCCTTCCCACGCCGAGTTTACTTCAATGGTGATAATTGTGTCATGC
CATCTCCTGAAAATTATCCATGGCTGCCGAATGCAAGCCCTCTAACAAAACCATTGGCAC
TCCCATTCTTGGTATTCTGGGTTGCCTTGGCTGCTCTGTTGGCTTATGCATGATTAGTGG
GATCAAGAGGTTTAGCAAGTTTCAAGTTGATGTCAGATTCCATGAGGTGCACTGCAACAA
GTCATTTGTTCATTCAATTCCATGGTTGCACAGAAAAGATGAGGCGATGCCAAGAAAAAG
TCGATATGTCTATGTGTTTAAGTTAAAGGGCCAAAATGTATTTCTTGTTTGGTATATAAC
AGCCCTACAACACTTTGGTGAACTTAGTTACTGCAGATTAGGTAATTACAGTTGCACCTT
TTGTATTTTATAGCAAACCCAGAATTTTTCATTGGATTCTACGACTGCCCCTCTTGTAG