Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034032_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:281626478:281630659:-1 gene:Zm00001d034032 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STRICTOSIDINE SYNTHASE-LIKE 3
Sequence	ATGGCGTCGCCGGGGGTGGTGGCCGCGGCGCTGCTGGTGGCGGTCCTGGCGGCATTCTGT GGCACGGATCCGCTGCGGATGGGCAGCATGGCGGGCTTCCCGGGGTTCGAGGCGCACTTC GTCGACCTCCCCGATCCCGCCGAGATGCCGCCGCACGCGGACGAGCGGGAGCGGCTCCGC GGGGCCGAGGTGCGGTTCCGCGGCGATGTGCAGGGTCCCGAGAGTGTCGCCTTCGACCCT CAGGGTCGCGGCCCGTACACGGGCGTCGCCGACGGCCGGGTCGTCTTCTGGGACGGCGAG CGGTGGGTCCCCTTCGCGACTGCCTCCCCGCGCTGGACGCAGGAGCTCTGCGGCGGGCCT AAAGCCTCGCCGGTGGAGTACCTCCCCAACGAGCACATCTGCGGCCGCCCGCTCGGGCTC CGCTTCGATAAGAAGACCGGGGACCTGTACATCGCCGACGCCTACTTCGGATTGCTTAAG GTCGGTCCCGAAGGCGGGCTGGCCACGCCGCTCGCAACGGAGGCCGAGGGCGTGCGCCTC AACTTCACCAACGACCTCGATCTCGACGACGAGGGCAATGTGTACTTCACGGACTCCAGC ATCCACTACCAGAGACGGTCCCGCCTCCGCCATTCAGGCCGACTGCGCAGGCCTGCCGAC GCACCAACGCCGAACACCACTCTGGCACATGCGCTGGTCCGGGACCAACCTGCCGGCGCC TCCGATGGTTGGCACGCGGAGGCCGCCAACCTCGCGCGCACCAGATTCCAGCCCTCCGCG CGCGGCGCCGCTCCCTGCCCTGGGGGCGACAGACAGCATCGTCTCCGCGCCTGCGACCCA CTGCCGGCCACATGCCCCCTTGCTGCGCGGGCACCCAGCCAGGACCCGCATCCCCCGGAT GTGCCATACAAACGCCTCGCTCTTTGCCGCCAGGATGCCGCCGAGGCCCTGGCCAGCCCA GCCGCGCTGGCGAAGGGTCGCCGTCCCACACGCGCCGTTGCCACCTCCTGGAATTTCATG CAGTTAGTTTTCTCGGGGGATCCCTCTGGGAGACTTCTGAAATATAACCCACAGACAAAG GAAACGACAGTACTGCATCGCAACCTCCAATTTCCCAACGGTGTGTCCATGAGCAAGGAT GGCTCATTCTTTGTTTTCTGCGAAGGATCGCGTGGCAGGCACTCAATATTTGTGTTCTTC GGAGACAGGTTGAGCAGATACTGGTTGAAAGGCGAGAAGGCAGGCACTGTGGATCTTTTC GCTATCTTGCCTGGCTTCCCAGACAATGTGAGAACGAATGAGAAGGGCGAGTTCTGGGTG GCAATCCACTGCCGCCGAAGTCTGTACGCCCGGCTTATGAGCCGCCATGTCAAGCTGAGG AAGTTTTTGCTCAGCCTCCCGATCCCCGCCAAGTACCACTACCTGATGCAGATCGGTGGC AGGCTCCACGCGGTCATCATCAAGTACAGCCCAGAGGGCCAGGTGCTTGACATCTTGGAG GACACCAAGGGCGAGGTGGTGAGAGCCGTCAGCGAAGTGGAGGAGAAAGACGGGAAGCTC TGGATAGGGTCTGTCCTGATGCCGTTCATCGCTGTCTTTGACCTCGCGAAGGCGTCTTAG

Peptide Sequence

PEP ID	Zm00001d034032_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:281626478:281630659:-1 gene:Zm00001d034032 transcript:Zm00001d034032_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STRICTOSIDINE SYNTHASE-LIKE 3
Sequence	MASPGVVAAALLVAVLAAFCGTDPLRMGSMAGFPGFEAHFVDLPDPAEMPPHADERERLR GAEVRFRGDVQGPESVAFDPQGRGPYTGVADGRVVFWDGERWVPFATASPRWTQELCGGP KASPVEYLPNEHICGRPLGLRFDKKTGDLYIADAYFGLLKVGPEGGLATPLATEAEGVRL NFTNDLDLDDEGNVYFTDSSIHYQRRSRLRHSGRLRRPADAPTPNTTLAHALVRDQPAGA SDGWHAEAANLARTRFQPSARGAAPCPGGDRQHRLRACDPLPATCPLAARAPSQDPHPPD VPYKRLALCRQDAAEALASPAALAKGRRPTRAVATSWNFMQLVFSGDPSGRLLKYNPQTK ETTVLHRNLQFPNGVSMSKDGSFFVFCEGSRGRHSIFVFFGDRLSRYWLKGEKAGTVDLF AILPGFPDNVRTNEKGEFWVAIHCRRSLYARLMSRHVKLRKFLLSLPIPAKYHYLMQIGG RLHAVIIKYSPEGQVLDILEDTKGEVVRAVSEVEEKDGKLWIGSVLMPFIAVFDLAKAS

Transcript Sequence

Transcript ID	Zm00001d034032_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:281626478:281630659:-1 gene:Zm00001d034032 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein STRICTOSIDINE SYNTHASE-LIKE 3
Sequence	TGAGGGATCCATGGGGTAGTTGACATGTGCGGAGCGCACAGGAGGCAGCGAGCGACCTTG TTGGCCGTGCACAGCGCACCCAGGCCAGTTTCCGCCGCGAAATATACAAAAGCCCCGGGC CCCGGCAGCCGCGGCGCGTCGAAGTGATGACCCCTCGTTCCATCCGTCCTCACTGAGCGG CAGCAAAGCACGCCGTGCCATTCCCATCACTAAGCGCTTGCGCGCGGCGGAGAAACCCAA GCGAAGCCCCGCAAGAGCGAGGCGAGGGAGAGTGGGGCGAGTGGGTGAGCCGCTGGCTAG CGGGATGGCGTCGCCGGGGGTGGTGGCCGCGGCGCTGCTGGTGGCGGTCCTGGCGGCATT CTGTGGCACGGATCCGCTGCGGATGGGCAGCATGGCGGGCTTCCCGGGGTTCGAGGCGCA CTTCGTCGACCTCCCCGATCCCGCCGAGATGCCGCCGCACGCGGACGAGCGGGAGCGGCT CCGCGGGGCCGAGGTGCGGTTCCGCGGCGATGTGCAGGGTCCCGAGAGTGTCGCCTTCGA CCCTCAGGGTCGCGGCCCGTACACGGGCGTCGCCGACGGCCGGGTCGTCTTCTGGGACGG CGAGCGGTGGGTCCCCTTCGCGACTGCCTCCCCGCGCTGGACGCAGGAGCTCTGCGGCGG GCCTAAAGCCTCGCCGGTGGAGTACCTCCCCAACGAGCACATCTGCGGCCGCCCGCTCGG GCTCCGCTTCGATAAGAAGACCGGGGACCTGTACATCGCCGACGCCTACTTCGGATTGCT TAAGGTCGGTCCCGAAGGCGGGCTGGCCACGCCGCTCGCAACGGAGGCCGAGGGCGTGCG CCTCAACTTCACCAACGACCTCGATCTCGACGACGAGGGCAATGTGTACTTCACGGACTC CAGCATCCACTACCAGAGACGGTCCCGCCTCCGCCATTCAGGCCGACTGCGCAGGCCTGC CGACGCACCAACGCCGAACACCACTCTGGCACATGCGCTGGTCCGGGACCAACCTGCCGG CGCCTCCGATGGTTGGCACGCGGAGGCCGCCAACCTCGCGCGCACCAGATTCCAGCCCTC CGCGCGCGGCGCCGCTCCCTGCCCTGGGGGCGACAGACAGCATCGTCTCCGCGCCTGCGA CCCACTGCCGGCCACATGCCCCCTTGCTGCGCGGGCACCCAGCCAGGACCCGCATCCCCC GGATGTGCCATACAAACGCCTCGCTCTTTGCCGCCAGGATGCCGCCGAGGCCCTGGCCAG CCCAGCCGCGCTGGCGAAGGGTCGCCGTCCCACACGCGCCGTTGCCACCTCCTGGAATTT CATGCAGTTAGTTTTCTCGGGGGATCCCTCTGGGAGACTTCTGAAATATAACCCACAGAC AAAGGAAACGACAGTACTGCATCGCAACCTCCAATTTCCCAACGGTGTGTCCATGAGCAA GGATGGCTCATTCTTTGTTTTCTGCGAAGGATCGCGTGGCAGGCACTCAATATTTGTGTT CTTCGGAGACAGGTTGAGCAGATACTGGTTGAAAGGCGAGAAGGCAGGCACTGTGGATCT TTTCGCTATCTTGCCTGGCTTCCCAGACAATGTGAGAACGAATGAGAAGGGCGAGTTCTG GGTGGCAATCCACTGCCGCCGAAGTCTGTACGCCCGGCTTATGAGCCGCCATGTCAAGCT GAGGAAGTTTTTGCTCAGCCTCCCGATCCCCGCCAAGTACCACTACCTGATGCAGATCGG TGGCAGGCTCCACGCGGTCATCATCAAGTACAGCCCAGAGGGCCAGGTGCTTGACATCTT GGAGGACACCAAGGGCGAGGTGGTGAGAGCCGTCAGCGAAGTGGAGGAGAAAGACGGGAA GCTCTGGATAGGGTCTGTCCTGATGCCGTTCATCGCTGTCTTTGACCTCGCGAAGGCGTC TTAG