Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d034004_T067
CDS Infomation	cds chromosome:B73_RefGen_v4:1:280901908:280909268:1 gene:Zm00001d034004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 15 description:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
Sequence	ATGCCGAAACAAACAGTGAAAGAAACGGTGGTTGATCGAAGAGACTCAGGTGTCCCTGAG AATGATAATCATGCGAATGTCACAGAGAATAAGGAGTCAGAAAATGGAAAGGAGATCAAT TTGAAGACCCAACCACCTGTGGGAATTGTTAAGAAAACATCCGGAGGAGGTGTTTCTGCG GTGGATCAGAATGTCTCTGGTTCAGCCATCACTGAGAGAAATGATACGGAGCATACTGAT TCTGATGGAGTTAAATCGGAAAATAAAACTCCTGTGCAGAAACCACTACTGTCTGTTGGT GCGAAGATTGTTGCCAGCAAGAAGAGGATATTGGAAGCAGAGCTTGATAAATCCACTGGG AGATCACCAATTGCTTTGCCATCCATGAAAAAGACAAGAAATATGTCTTCTGGTCCTGAG ATAAACCAACCTGATAAGTCTACTGGAGATAAACTTATTGAGAATAATTGTGATTCGGGC AATAAGCGTGTTCTGAGGGAACGGCAGCATCGCAATCAAACAAATTTGTCAACCAGATAT TCTAATCACTCTAATCAAAATGATATGGAGCAGACACAGGATCAATCTGATGATGATGAG ATCAGCAGCGATACTTCCTACAGGAGAACTCGTAGCAGACGTCGTTGTGGTGCTGCCCGT CTTGCTGTGCCAAAACAAGAGGACTCTAGTGATTCTGAAGATTTTATTGCTGTGAAAAAG AATCGGCGGAAACGGAAGAAATCTGTGCATAAACAAAGGGCTGGATCTAAGTTGAAGCAT ACTTCTGGTCCTTCCAAAGCAGGTCGTTTGGGTAGACCTCCTCTGATCAAATCTGAATCT AGTTCCTTATCTCTGCAGCCAGGAAAAGGGGAAAGGAAGGTGCCTGAAGGTACAGGAACT CTTCGCGAAGAAAAGCAAAAAATAAGTGATCAGATAAAGGCCATGCTTCTAGATGCTGGT TGGACGATTGATTTAAGACCCAGGAATGGTAGAAACTACATGGATTCTGTGTATATACCT CCTAGTGGCAAAGGGTCTTACTGGTCAGTCACAAAAGCATATTATGCGTTTCGTGCTGGT ATGGAATCTGAGCAGCAGGAAAGTCCTAAAGACCAGTCTTTGTCAACAAAATCTGTTGGT AGCCCCGACAAAAGGCAGGTCTCTAGTTCTTCAGGTTATACTTTAACAGAGGATATCCTT AGCAAATTAAAAAGAGTTGTTGTAAACAAACGAACAACCAAATTAGAGATTCAAAGGTTG AGACAGAAAAGGTTCAAAAAGGAAAAGAAGAAGAAGAACGTTTCAAATTCAAGAAGCCTG CATCTAGGCAATGAAAGGAAAAAGAGAGGTGGCTGTGCTCTACTCGCTCGTGGATCGAAC AAGGAGTCTGGCAGCAGCACTGATGGTTTTGTTCCATATGAATGGAAACGTACGATCTTT TCCTGGCTGATTGATCTGGATGTTCTATCAGTCAACACTAAGCTGAAATGTATGGATGGA AGCCACTCAAAGGTTTTACTAGAGGGTTTTGCCACTAGGGATGGGATTAACTGCAGCTGC TGTAACGAGGTCTATTCAGTGCTTGAATTTGTGACTCATGCTGGTTCTGAAGTAAATAAG CCATACAGAAACATACTTGTGGATGGGCTAGACATTGACCTTTTGCACTGTCTCATTAAT GCATGGAATATGCAGTCTGATGTTGAAAGGCAAGATTTCTTTCCAGTTAGCATTGAGGGC GATGACCCCAATGATGACACATGTGGTATTTGCGGCGATGGAGGCAATTTGATCTGCTGT GATGGATGCCCCTCGACATTTCACATGAGTTGTCTAGGACTGGAGGTACTTCCCTCTGAT TATTGGTGTTGTGCAAACTGCTCATGTAAATTTTGCCACGAACATTCTAGTGATGGTGCT GAAGACACTGCTGATGTTGATTATTCATTGCATACTTGTTCCCAGTGCGAAGAGCAGTAT CATGAAGCCTGCTCTCCTGAGACTGATTCCATAACTAACCTTTCCAGTCAGACAGGCAAT TTATTCTGCCAACAAAGCTGCAGACTGCTGTTCGAGGAATTGCAGAATCTTCTTGCAGTC AAGAAGGATCTTGAACCAGAATATTCATGCAGAGTTGTTCAACGCATCCATGAAGATGTA CCAGAAGAAGTCCTTGCTTTGGACAAAAGAGTTGAGTGTAACTCCAGGATTGCCGTTGCA CTTTCATTAATGGATGAGTGCTTCCTTCCGATTATTGACCAGAGAACTGGCATCAACTTG ATACGAAATGTTGTGTATAGCTGTGGATCAAATTTTGCCCGGTTGGATTTCCGTGGATTC TATATATTTATTTTAGAACGTGGAGATGAAATAATAGCTGCAGCATCTGTCCGGTGCGTT GTTTCCTCTTGTTTCTTTTTCTTGCTATGTTTTGTGACTGTCTAG

Peptide Sequence

PEP ID	Zm00001d034004_P067
PEP Infomation	pep chromosome:B73_RefGen_v4:1:280901908:280909268:1 gene:Zm00001d034004 transcript:Zm00001d034004_T067 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 15 description:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
Sequence	MPKQTVKETVVDRRDSGVPENDNHANVTENKESENGKEINLKTQPPVGIVKKTSGGGVSA VDQNVSGSAITERNDTEHTDSDGVKSENKTPVQKPLLSVGAKIVASKKRILEAELDKSTG RSPIALPSMKKTRNMSSGPEINQPDKSTGDKLIENNCDSGNKRVLRERQHRNQTNLSTRY SNHSNQNDMEQTQDQSDDDEISSDTSYRRTRSRRRCGAARLAVPKQEDSSDSEDFIAVKK NRRKRKKSVHKQRAGSKLKHTSGPSKAGRLGRPPLIKSESSSLSLQPGKGERKVPEGTGT LREEKQKISDQIKAMLLDAGWTIDLRPRNGRNYMDSVYIPPSGKGSYWSVTKAYYAFRAG MESEQQESPKDQSLSTKSVGSPDKRQVSSSSGYTLTEDILSKLKRVVVNKRTTKLEIQRL RQKRFKKEKKKKNVSNSRSLHLGNERKKRGGCALLARGSNKESGSSTDGFVPYEWKRTIF SWLIDLDVLSVNTKLKCMDGSHSKVLLEGFATRDGINCSCCNEVYSVLEFVTHAGSEVNK PYRNILVDGLDIDLLHCLINAWNMQSDVERQDFFPVSIEGDDPNDDTCGICGDGGNLICC DGCPSTFHMSCLGLEVLPSDYWCCANCSCKFCHEHSSDGAEDTADVDYSLHTCSQCEEQY HEACSPETDSITNLSSQTGNLFCQQSCRLLFEELQNLLAVKKDLEPEYSCRVVQRIHEDV PEEVLALDKRVECNSRIAVALSLMDECFLPIIDQRTGINLIRNVVYSCGSNFARLDFRGF YIFILERGDEIIAAASVRCVVSSCFFFLLCFVTV

Transcript Sequence

Transcript ID	Zm00001d034004_T067
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:280901908:280909268:1 gene:Zm00001d034004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 15 description:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
Sequence	GGAGGCACGGTTTGAGAAGCGAATCACAAGGTCAGCTACAGTTAGGCAGAGAGAAGTTTC TGCGAGCTCACACAAAACTTCCACAAATGAGGCTGCACTAGAAGGCAGAGGGAGGAAGGG AGATATTGTTGCTCACTATACAAGGAAAGTAAGCAGTGCAGTATCTCCAAAAGGTCACCA TGCTGAGCTGGGAGACTGTAATACCAGTATGCCGAAACAAACAGTGAAAGAAACGGTGGT TGATCGAAGAGACTCAGGTGTCCCTGAGAATGATAATCATGCGAATGTCACAGAGAATAA GGAGTCAGAAAATGGAAAGGAGATCAATTTGAAGACCCAACCACCTGTGGGAATTGTTAA GAAAACATCCGGAGGAGGTGTTTCTGCGGTGGATCAGAATGTCTCTGGTTCAGCCATCAC TGAGAGAAATGATACGGAGCATACTGATTCTGATGGAGTTAAATCGGAAAATAAAACTCC TGTGCAGAAACCACTACTGTCTGTTGGTGCGAAGATTGTTGCCAGCAAGAAGAGGATATT GGAAGCAGAGCTTGATAAATCCACTGGGAGATCACCAATTGCTTTGCCATCCATGAAAAA GACAAGAAATATGTCTTCTGGTCCTGAGATAAACCAACCTGATAAGTCTACTGGAGATAA ACTTATTGAGAATAATTGTGATTCGGGCAATAAGCGTGTTCTGAGGGAACGGCAGCATCG CAATCAAACAAATTTGTCAACCAGATATTCTAATCACTCTAATCAAAATGATATGGAGCA GACACAGGATCAATCTGATGATGATGAGATCAGCAGCGATACTTCCTACAGGAGAACTCG TAGCAGACGTCGTTGTGGTGCTGCCCGTCTTGCTGTGCCAAAACAAGAGGACTCTAGTGA TTCTGAAGATTTTATTGCTGTGAAAAAGAATCGGCGGAAACGGAAGAAATCTGTGCATAA ACAAAGGGCTGGATCTAAGTTGAAGCATACTTCTGGTCCTTCCAAAGCAGGTCGTTTGGG TAGACCTCCTCTGATCAAATCTGAATCTAGTTCCTTATCTCTGCAGCCAGGAAAAGGGGA AAGGAAGGTGCCTGAAGGTACAGGAACTCTTCGCGAAGAAAAGCAAAAAATAAGTGATCA GATAAAGGCCATGCTTCTAGATGCTGGTTGGACGATTGATTTAAGACCCAGGAATGGTAG AAACTACATGGATTCTGTGTATATACCTCCTAGTGGCAAAGGGTCTTACTGGTCAGTCAC AAAAGCATATTATGCGTTTCGTGCTGGTATGGAATCTGAGCAGCAGGAAAGTCCTAAAGA CCAGTCTTTGTCAACAAAATCTGTTGGTAGCCCCGACAAAAGGCAGGTCTCTAGTTCTTC AGGTTATACTTTAACAGAGGATATCCTTAGCAAATTAAAAAGAGTTGTTGTAAACAAACG AACAACCAAATTAGAGATTCAAAGGTTGAGACAGAAAAGGTTCAAAAAGGAAAAGAAGAA GAAGAACGTTTCAAATTCAAGAAGCCTGCATCTAGGCAATGAAAGGAAAAAGAGAGGTGG CTGTGCTCTACTCGCTCGTGGATCGAACAAGGAGTCTGGCAGCAGCACTGATGGTTTTGT TCCATATGAATGGAAACGTACGATCTTTTCCTGGCTGATTGATCTGGATGTTCTATCAGT CAACACTAAGCTGAAATGTATGGATGGAAGCCACTCAAAGGTTTTACTAGAGGGTTTTGC CACTAGGGATGGGATTAACTGCAGCTGCTGTAACGAGGTCTATTCAGTGCTTGAATTTGT GACTCATGCTGGTTCTGAAGTAAATAAGCCATACAGAAACATACTTGTGGATGGGCTAGA CATTGACCTTTTGCACTGTCTCATTAATGCATGGAATATGCAGTCTGATGTTGAAAGGCA AGATTTCTTTCCAGTTAGCATTGAGGGCGATGACCCCAATGATGACACATGTGGTATTTG CGGCGATGGAGGCAATTTGATCTGCTGTGATGGATGCCCCTCGACATTTCACATGAGTTG TCTAGGACTGGAGGTACTTCCCTCTGATTATTGGTGTTGTGCAAACTGCTCATGTAAATT TTGCCACGAACATTCTAGTGATGGTGCTGAAGACACTGCTGATGTTGATTATTCATTGCA TACTTGTTCCCAGTGCGAAGAGCAGTATCATGAAGCCTGCTCTCCTGAGACTGATTCCAT AACTAACCTTTCCAGTCAGACAGGCAATTTATTCTGCCAACAAAGCTGCAGACTGCTGTT CGAGGAATTGCAGAATCTTCTTGCAGTCAAGAAGGATCTTGAACCAGAATATTCATGCAG AGTTGTTCAACGCATCCATGAAGATGTACCAGAAGAAGTCCTTGCTTTGGACAAAAGAGT TGAGTGTAACTCCAGGATTGCCGTTGCACTTTCATTAATGGATGAGTGCTTCCTTCCGAT TATTGACCAGAGAACTGGCATCAACTTGATACGAAATGTTGTGTATAGCTGTGGATCAAA TTTTGCCCGGTTGGATTTCCGTGGATTCTATATATTTATTTTAGAACGTGGAGATGAAAT AATAGCTGCAGCATCTGTCCGGTGCGTTGTTTCCTCTTGTTTCTTTTTCTTGCTATGTTT TGTGACTGTCTAGGCATCTATATGTCACTGAATGTTGTATCCAGTGAGATGTATACCCAA GCTATATAGATCTGAATACGAGTTTGGTAAAATGATAAGAAAGAATCATACTATAGGATT TAAAACCCCCTTGAACAAACCAAAGTTTGTGCCAATGTGCCGGCAAAAGATATTCTGAAC AACATGCCAGGGGCCAGTGTTCTTTTCTTTGAATCAATTCATTTCTAATTTTCAAACACG ATGACTTGATTTTACATATTTCTAGTACTGTTGATCTTGTTTGCTGCCTAACTTTAGTAT AGTGATGTACCCGTTACTCACTTGAATTACTTTACATGATTGTTGTAACCATCACATATT ACAATTTGAAGGAAAAGAAAATCCTTACTTGAATGCCTACTTGCCTAGTATTTTGCTGTA CAGGTAATGGTTTGTTGGTGCTGAATAATAATTTATGGTATCTGCAGCGTCGTGGAGGCA AACCTCTCTTTATATTTCTTTAAGCTACTAAGAAGTTTTGAACGCTTCCTCTAGGAATGT CATTTCATGTTTTCATGAATATAGTTTGCATAATTAGTCATGCCTATCAGCCTATGCATG AACTTTCTGTAGCTTCCTAATAGACATCTGCCAAGGCATGTTATGCATCTTGTATTTTTC ATACATGAACTCTCTGTAGCTGTTTTGTGTCTGTCTTTTACATCATTGGATGAACAGCTA AACATAAACAGACAGGCTCTCTACTTTTAGTTAGGTTTCTATTCTTGAATTGCTGGGCCC TTATATGATTTTGTTGTTTTCATATCTTATCCTGAAACAGAATACATGGAACCAAGTTAG CTGAGATGCCGTTCATTGGTACCCGGAATATGTATAGGCGACAAGTTTTATTGGTAGCAC TTGTATTGATATTGAATAGTAGCCCCATGGGTTTTATATATGGGAGTATGAGTCCAGCAT GAGGTATAGGATTGGTATTCATTATCTTATGTGTGCCTTTTCTGGTTTGTACAATCCTTG TACTGCTGAACTAGTGTATGCCTTACATGGTTGAACCGACTGGGCGCATTGTATTTTCAA AAGTGTCTATAGACCTTACATTGATGATGACCATAGTAGGTTAGATTAACTGATCTGATC TCTTGCTTAGTTGCACTTTTCTGATGGTGTTTAGTTATTGCCCCTTGTTTTCCATTTCAG ATCCTCAGCTCTCTCAATGTTGAGAAGTTGATCATTCCTGCTATCACAGAACTTGTGGAC ACCTGGACATCGAAATTTGGATTTAGTCCACTTGAAGATTCTGAGAAGCAAGAAGTGAAA TCTATCAGCATGTTAGTTTTTCCTGGTACAGGTCTCCTCCAAAAGCCATTGCTAAAGGCC TTGCCTAATGAAGAACAATGTTCCCAAGGAGACAAAACTGAGAAAGCATCTGATGTAGTC AATGAAGATTCTCCTTGCTCTGATGCAAGTGCTGATCCCCTAGGTTTGGGGGTCAAAGAG CATGAGGACAGCAGCAAAGACGCTGATGGCACTTGTAACGGTGACGTTTCACAGGAATGT CCCCATTCTTGGTAAGTACAAGTGAAGCTTAC