Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d034000_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:1:280700282:280706287:-1 gene:Zm00001d034000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGAAGACGATTGACCATTATGATAGCTTAATGGATCTATTTGGTAAGAATAGGGAG
AAACGTCAAGACGTTGAGAACTCAAAAGGTACCTCGAAGAAAAAGGCGCGAACAGAACCG
CCAAAGGAGATACTTCAACGTACTCCATTAAATCGGAAGGGGTCAGCTCTTGCCGAAAGT
TCAGATAAGACGGTGGACAAATGTGAGATCCATGATGAGATAAAAACAAATGTGGAACTT
GATTTGTCAGAATCGTGCAGAACTGATAATGGCATTGTTGCCATACCTGTTCGTGCCTAT
TCATACGGTAAAGGTTTGCCCTATGCTCCTGAAAATTGGCCACGTCATGGAGACATATGG
CACTGGAAAGTTGGAAGCAGGGCTTCTGGAGCAGGCCATTGGGCTGACAGGTATATTATG
CCGCCATCCCGTTTTCGTGGCGCTGCTCCTAAGAAGTTAGGATTTGCAAGTAGAGGATTT
GCAAGTAGGTTACAAGTTGAGGAATTCGTTAAGAGAGAATTTCCGGATGTTGATCCTAGC
ACATTCTTTTCTATGTTTATCTGGAAGATCCCTGCTGAAGGATACAGGATCCAAAAAGGC
ACCCGACAAGTGAGGATCCATGAACCTGAACCTGTGGTGGCTGATCCGGGTGGTCTCTGC
AAGGCTAGGAATAGCTTGTGCAATCTTCAAAGGGAAGGTTTTGTTGAATCATCACCAGCA
CGGGTTTGTAATATCTGCTGCAAAGAGCCTGGTTTCTGTCGTGAGTGCTGCTGCCTTCTC
TGTAACAGGACCGTTGATTATTCTCTTGGAAGTTACAGCTGCATAAAATGTGAGGCAGTT
GTGGAAGAGAACTTAATATGTGGGCATTTTGCACACCTTGAATGTGCTCTTCGATGTTAC
ATGGCTGGAACTGTTGGAGGAAGTTTTGGCTTGGATGTCCAATATTTATGCAGGCTCTGT
GATAACAAAACCAACTTAATGACACATGTGGAGAAACTCATGGAAACATGCCAATCTCTT
GAATCTAGGGACCAAATCAAACCTATGCTGAATTTGGGATTATGCCTCTTGCGTGGATCA
AAACAAATGAGAGCAAGAAACTTGGAGAACCATATGAGATCAGCAATGGAAAAGCTGGAA
TGTGGATTTGATTTTGTTGAAGTCTGGAAATTGGAAGGTGACGAGGGCAGGACAACACTC
AATGCAGGAGAGAATTCCCCAACCACCAATGGTGTGACTGTGCTTGGGGCTCGGCAAGTT
CCTGAAGCGGGTGCACTTACAGGGCATCCTGATCTGATAGATCCACTGGTTGATAATGAC
TTCGAGACGGTTATAGAAAACCTTCCAGTGTTCATTACTGGAGATCAGAATGCCGCGTCT
GCTAAATTTGAGGATGAGATAGATCTTGCTCTTCAAGAACTGAAAAAATCTCAGGAAGCG
GAATATAGCGTGGCGGAGCAGAAGCTTTACGCCCAGAAAGACCACATCCTCTGTCTGTAC
AGGCAGCTTGACGCTGAAAGGGCTGAACTTGCAGATCCCATGCCCTTGTCTGATGCTTCA
AATTATGGTGCGATGCTCGCTAATGTTCTAAGCCGCGTGGACCAAGTCAAGCGTGAGGAG
GAGAAATTTAGGTCTATGCTGAAAGTTGCTGGCGGATTTGCGAAAGCACCACAAAGCGTC
ACCAGGGAGATGTTCGGATTACCTGCTGATAAGTAG

Peptide Sequence

PEP ID

Zm00001d034000_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:1:280700282:280706287:-1 gene:Zm00001d034000 transcript:Zm00001d034000_T008 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMKTIDHYDSLMDLFGKNREKRQDVENSKGTSKKKARTEPPKEILQRTPLNRKGSALAES
SDKTVDKCEIHDEIKTNVELDLSESCRTDNGIVAIPVRAYSYGKGLPYAPENWPRHGDIW
HWKVGSRASGAGHWADRYIMPPSRFRGAAPKKLGFASRGFASRLQVEEFVKREFPDVDPS
TFFSMFIWKIPAEGYRIQKGTRQVRIHEPEPVVADPGGLCKARNSLCNLQREGFVESSPA
RVCNICCKEPGFCRECCCLLCNRTVDYSLGSYSCIKCEAVVEENLICGHFAHLECALRCY
MAGTVGGSFGLDVQYLCRLCDNKTNLMTHVEKLMETCQSLESRDQIKPMLNLGLCLLRGS
KQMRARNLENHMRSAMEKLECGFDFVEVWKLEGDEGRTTLNAGENSPTTNGVTVLGARQV
PEAGALTGHPDLIDPLVDNDFETVIENLPVFITGDQNAASAKFEDEIDLALQELKKSQEA
EYSVAEQKLYAQKDHILCLYRQLDAERAELADPMPLSDASNYGAMLANVLSRVDQVKREE
EKFRSMLKVAGGFAKAPQSVTREMFGLPADK

Transcript Sequence

Transcript ID

Zm00001d034000_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:280700282:280706287:-1 gene:Zm00001d034000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACGCCACTTCGAGTCGCGCCCGGCGTCCCCAACTCCACCGACGCCGAGCACAACCGTTGT
TTCCGGCTGGTCCTCCACTGGCCGCTCCTCAGTCAGTCCCGGATTCTCCCTTGGGTCTGG
AGTGGAATGGAGGTTAATCCGATCATGGGGTGATTTCCTCTTTTAACTGGTGAGTAATCG
TAGGTTAGCTGGGCGGATTGCTCCGGGTATGAGTTGGTTTCGTAATCTCCATCCGGTTAG
TTGTGGAATTGTGTGCCCGCTCACTCTCTACTAATCAGTCGATTTATCCGTGATTTGGTT
AGGATTTTCTTCCTCGTGTAGGATCAGCGCAGCCGGAGCTCAAAGGTGCCTGTGGAGTTT
ATTACATCAAGAATTTTGGGTTCGACATAATCCCCATGTCCCCCAATAAGTCCGGCCATG
CTTCAGGCCGTGACGCGGTTTTCTGGTCCGATAGAATGAACGAATATCTTATTGATTCGC
TGCTTCACCAGCAAGCCATTGGGAACAGGAGTGAGTCCAAATTCTCATCGGTGGCATATG
ATAGCATCATCACCGGTGTGGGTGAGAGGTTTGGCGTGGTGATCGACCGGAACAATATAA
AAAATCGCCTAAAGCATATCAAGGAATCGTTCAATGAATGTAGGAACCTCCTTGGTGAAG
ATAATCGGTTTAGGTGGTGCCCAGAGAGCAGAAGATTCAATGCCGACCCAAATGTTTGGA
GGGAGTTGATCGAGGTTTGTGTGCGCTATCAATTCAGTCAAGAATAGGCGTTGACTTCTC
TGTTGGATAGAAAAAAAAACACCGAAAGCCCCTGCTTTGTTTTGTAGAGAAAACCAGAAG
CAAAGAAATGGATGATGAAGACGATTGACCATTATGATAGCTTAATGGATCTATTTGGTA
AGAATAGGGAGAAACGTCAAGACGTTGAGAACTCAAAAGGTACCTCGAAGAAAAAGGCGC
GAACAGAACCGCCAAAGGAGATACTTCAACGTACTCCATTAAATCGGAAGGGGTCAGCTC
TTGCCGAAAGTTCAGATAAGACGGTGGACAAATGTGAGATCCATGATGAGATAAAAACAA
ATGTGGAACTTGATTTGTCAGAATCGTGCAGAACTGATAATGGCATTGTTGCCATACCTG
TTCGTGCCTATTCATACGGTAAAGGTTTGCCCTATGCTCCTGAAAATTGGCCACGTCATG
GAGACATATGGCACTGGAAAGTTGGAAGCAGGGCTTCTGGAGCAGGCCATTGGGCTGACA
GGTATATTATGCCGCCATCCCGTTTTCGTGGCGCTGCTCCTAAGAAGTTAGGATTTGCAA
GTAGAGGATTTGCAAGTAGGTTACAAGTTGAGGAATTCGTTAAGAGAGAATTTCCGGATG
TTGATCCTAGCACATTCTTTTCTATGTTTATCTGGAAGATCCCTGCTGAAGGATACAGGA
TCCAAAAAGGCACCCGACAAGTGAGGATCCATGAACCTGAACCTGTGGTGGCTGATCCGG
GTGGTCTCTGCAAGGCTAGGAATAGCTTGTGCAATCTTCAAAGGGAAGGTTTTGTTGAAT
CATCACCAGCACGGGTTTGTAATATCTGCTGCAAAGAGCCTGGTTTCTGTCGTGAGTGCT
GCTGCCTTCTCTGTAACAGGACCGTTGATTATTCTCTTGGAAGTTACAGCTGCATAAAAT
GTGAGGCAGTTGTGGAAGAGAACTTAATATGTGGGCATTTTGCACACCTTGAATGTGCTC
TTCGATGTTACATGGCTGGAACTGTTGGAGGAAGTTTTGGCTTGGATGTCCAATATTTAT
GCAGGCTCTGTGATAACAAAACCAACTTAATGACACATGTGGAGAAACTCATGGAAACAT
GCCAATCTCTTGAATCTAGGGACCAAATCAAACCTATGCTGAATTTGGGATTATGCCTCT
TGCGTGGATCAAAACAAATGAGAGCAAGAAACTTGGAGAACCATATGAGATCAGCAATGG
AAAAGCTGGAATGTGGATTTGATTTTGTTGAAGTCTGGAAATTGGAAGGTGACGAGGGCA
GGACAACACTCAATGCAGGAGAGAATTCCCCAACCACCAATGGTGTGACTGTGCTTGGGG
CTCGGCAAGTTCCTGAAGCGGGTGCACTTACAGGGCATCCTGATCTGATAGATCCACTGG
TTGATAATGACTTCGAGACGGTTATAGAAAACCTTCCAGTGTTCATTACTGGAGATCAGA
ATGCCGCGTCTGCTAAATTTGAGGATGAGATAGATCTTGCTCTTCAAGAACTGAAAAAAT
CTCAGGAAGCGGAATATAGCGTGGCGGAGCAGAAGCTTTACGCCCAGAAAGACCACATCC
TCTGTCTGTACAGGCAGCTTGACGCTGAAAGGGCTGAACTTGCAGATCCCATGCCCTTGT
CTGATGCTTCAAATTATGGTGCGATGCTCGCTAATGTTCTAAGCCGCGTGGACCAAGTCA
AGCGTGAGGAGGAGAAATTTAGGTCTATGCTGAAAGTTGCTGGCGGATTTGCGAAAGCAC
CACAAAGCGTCACCAGGGAGATGTTCGGATTACCTGCTGATAAGTAGTTGTAATAGCAGA
CTTGCTTGGAACTTAACTATCTGTAGTTTACCATAGAACCAAACTTGGCTGTGTTGTTAT
AGCTGTATGAGCTGTACATCCTACCGACGGGTTACCCCATAAAGACTGGTTTGGATGAAA
CCAGCAAGTGCTGCGGATGCGCAGGTTCTCTATGGACCTGCTTGTACTAACTACTAAGAT
TCGTTAAATGTGACATTCTAAATG