Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033994_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:280605396:280608220:1 gene:Zm00001d033994 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy16L description:Autophagy-related protein 16
Sequence	ATGACGATGGTCGAGGCCGAGGCTGGTAGGGCGGCGATCCGGCGCGCCCTGCGGTCGCTG AAACGGAGGCATCTCGCCGAGGAAGGGGCGCACAGCCCGGCCATCGAGGCGCTAACCCGT CCCTTCGCCGCCCACGCTTTGGAGTGGAAGGAGAAGGCTGAGAAGCATGAGTTAGAGCTG CAGCAATGCTACAAGGCGCAATCCCGGCTCTCTGAGCAGCTTGTGACTGAGATAGAAGAA GGTAAAGTATCAAAAGCACTGCTCAAAGAGAAGGAAGCGATGGTTACAAGTTTGCAGGCT GAACTTGAGAAGACAAGCGAAGAGAATGTACAACTAAAGCAGTCGCTTGACGAAAAAATA AAAGCCTTAGATCTTCTCATTCAAGAGCATCAGACAGTGAAATCCGAGCTTGAACAAGCA TTGACGAAACTAAAAGCTGCAGAGGATGAGAACCAAAATCTGGTTGATCGATGGATGCTA GAGAAGATGAAGGATGCCGAGAGGCTCAATGAGGCCAATGCGATGTATGAGGAGATGGTT CTAAAGCTAAAGACAGCTGGAGTTGGTGGTATACAACTTAATGCACAGCAAGAAACTGAT GGCATCATACGGCGTTCTGAAGCTGGTTACATAGAAACGCCAATCCCATCAACATGCACA ATAACTATCCGTGCTCATGATGGTGGGTGTGGAGCTTTGATGTTTGAGCATAACTCAGAC AAGCTAATTAGTGGGGGTCAGGATCAAACTGTTAAGATATGGGGTGCATCTACTGGCGCT TTGACCGCCACCCTACATGGTTGCTTGGGGTCTGTTAATGATCTTGCCGTGACCAACGAT AACAAGTTTGTGATCGCTGCCTGTAGCTCCAACAAGCTGTTTGTGTGGGAAGTCAGTGGG GGACGTCCTCGCCACACGCTGACTGGTCACACGAAAAATGTTTCTTCTGTTGATGCAAGC TGGGTGAAGAGCTTTGTTGTTGCTAGTTCATCCAGTGACCGTACTATCAAGGTTTGGGAT CTACAGACAGGTTTCTGCAAGAGCACCATAATGTCCGCGAGCAACCCCAACTCGCTAGCT TTCATCGATGGTGACACCATCTGTTCGGGTCACAGGGATGGGAATCTTCGGCTGTGGGAT ATCCGCAGTGGGAAATGCACCACACAGATAGCTGCTCATCTGGATGTCACCTCGGTCTGC GTGTCACGGAGCAGGAATTTCGTTCTTACAAGTGGGAGAGATAACGTGCACAACCTTTTT GATGTTAGAACGCTGGAGATTTGTGGAACATTCAGGGCCATGGGCAACAGAGTGGTGAGC AGCTGGGGCAAACCTTCTATTAGCCCCGACGAAAACTGCATCGCTGCTGGTTCTTCTGAT GGATCTGTTTACATATGGTCGAGGCTGAAGAATGGAACGCCGACCATCCTAGAGGGTCAT TCTTCACCCGTCCTGGCAAGTGCATGGTGCGGACTAGGAGCTCTTGCTACCTCCGACAGG AACCATATCTATATCTGGTCTTGA

Peptide Sequence

PEP ID	Zm00001d033994_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:280605396:280608220:1 gene:Zm00001d033994 transcript:Zm00001d033994_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy16L description:Autophagy-related protein 16
Sequence	MTMVEAEAGRAAIRRALRSLKRRHLAEEGAHSPAIEALTRPFAAHALEWKEKAEKHELEL QQCYKAQSRLSEQLVTEIEEGKVSKALLKEKEAMVTSLQAELEKTSEENVQLKQSLDEKI KALDLLIQEHQTVKSELEQALTKLKAAEDENQNLVDRWMLEKMKDAERLNEANAMYEEMV LKLKTAGVGGIQLNAQQETDGIIRRSEAGYIETPIPSTCTITIRAHDGGCGALMFEHNSD KLISGGQDQTVKIWGASTGALTATLHGCLGSVNDLAVTNDNKFVIAACSSNKLFVWEVSG GRPRHTLTGHTKNVSSVDASWVKSFVVASSSSDRTIKVWDLQTGFCKSTIMSASNPNSLA FIDGDTICSGHRDGNLRLWDIRSGKCTTQIAAHLDVTSVCVSRSRNFVLTSGRDNVHNLF DVRTLEICGTFRAMGNRVVSSWGKPSISPDENCIAAGSSDGSVYIWSRLKNGTPTILEGH SSPVLASAWCGLGALATSDRNHIYIWS

Transcript Sequence

Transcript ID	Zm00001d033994_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:280605396:280608220:1 gene:Zm00001d033994 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:autophagy16L description:Autophagy-related protein 16
Sequence	GCTCTCGTCTTCCTCTTTCTTCTAGTTTCGTCTAGTCTTCAAGGAAGACCGGAACCGAGG CGCCCTGGCCGAGAACTGGAGCCACCGGACGCACGGCTGCTGCCGAAATCCACGGGAGAA TGACGATGGTCGAGGCCGAGGCTGGTAGGGCGGCGATCCGGCGCGCCCTGCGGTCGCTGA AACGGAGGCATCTCGCCGAGGAAGGGGCGCACAGCCCGGCCATCGAGGCGCTAACCCGTC CCTTCGCCGCCCACGCTTTGGAGTGGAAGGAGAAGGCTGAGAAGCATGAGTTAGAGCTGC AGCAATGCTACAAGGCGCAATCCCGGCTCTCTGAGCAGCTTGTGACTGAGATAGAAGAAG GTAAAGTATCAAAAGCACTGCTCAAAGAGAAGGAAGCGATGGTTACAAGTTTGCAGGCTG AACTTGAGAAGACAAGCGAAGAGAATGTACAACTAAAGCAGTCGCTTGACGAAAAAATAA AAGCCTTAGATCTTCTCATTCAAGAGCATCAGACAGTGAAATCCGAGCTTGAACAAGCAT TGACGAAACTAAAAGCTGCAGAGGATGAGAACCAAAATCTGGTTGATCGATGGATGCTAG AGAAGATGAAGGATGCCGAGAGGCTCAATGAGGCCAATGCGATGTATGAGGAGATGGTTC TAAAGCTAAAGACAGCTGGAGTTGGTGGTATACAACTTAATGCACAGCAAGAAACTGATG GCATCATACGGCGTTCTGAAGCTGGTTACATAGAAACGCCAATCCCATCAACATGCACAA TAACTATCCGTGCTCATGATGGTGGGTGTGGAGCTTTGATGTTTGAGCATAACTCAGACA AGCTAATTAGTGGGGGTCAGGATCAAACTGTTAAGATATGGGGTGCATCTACTGGCGCTT TGACCGCCACCCTACATGGTTGCTTGGGGTCTGTTAATGATCTTGCCGTGACCAACGATA ACAAGTTTGTGATCGCTGCCTGTAGCTCCAACAAGCTGTTTGTGTGGGAAGTCAGTGGGG GACGTCCTCGCCACACGCTGACTGGTCACACGAAAAATGTTTCTTCTGTTGATGCAAGCT GGGTGAAGAGCTTTGTTGTTGCTAGTTCATCCAGTGACCGTACTATCAAGGTTTGGGATC TACAGACAGGTTTCTGCAAGAGCACCATAATGTCCGCGAGCAACCCCAACTCGCTAGCTT TCATCGATGGTGACACCATCTGTTCGGGTCACAGGGATGGGAATCTTCGGCTGTGGGATA TCCGCAGTGGGAAATGCACCACACAGATAGCTGCTCATCTGGATGTCACCTCGGTCTGCG TGTCACGGAGCAGGAATTTCGTTCTTACAAGTGGGAGAGATAACGTGCACAACCTTTTTG ATGTTAGAACGCTGGAGATTTGTGGAACATTCAGGGCCATGGGCAACAGAGTGGTGAGCA GCTGGGGCAAACCTTCTATTAGCCCCGACGAAAACTGCATCGCTGCTGGTTCTTCTGATG GATCTGTTTACATATGGTCGAGGCTGAAGAATGGAACGCCGACCATCCTAGAGGGTCATT CTTCACCCGTCCTGGCAAGTGCATGGTGCGGACTAGGAGCTCTTGCTACCTCCGACAGGA ACCATATCTATATCTGGTCTTGAGAGATGTACAATTTCATCAAGGCGTGGAAACTGGAGA GTTTCGCATCATCAGTATGCTAATATGTGTTCTCTTCATTTCTTGATGACACTAGTTTTC ATGTGATTATGTGAACGGATTAACTGGTTCTGATTTCTGAACGTTGTAAATATCAGAAGT GATTGTTCATCGTAGTGATGACTACTTCAGTTCGCCATATGTGTGATGGTTTGCA