Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033992_T018
CDS Infomation	cds chromosome:B73_RefGen_v4:1:280588343:280594545:1 gene:Zm00001d033992 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:empty pericarp10 description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGGATGAGGTCAGCAGGATTTTGAGATCCCGGTTTGCTTCTCCAGAGGCTATTGTGATC ACCATGGACTGCTGCCCTGTCAGGGTGTCAGCACGCCTTGTCAGCAAGGTCCTGAGCAGG TTCAGCAATGATTGGGTGGCCGCATTTGGGTTCTTCATGTGGGCCGGAACTCAGGAAGGC TACTGTCATTGTGCTGATTCATATGACATGATGGTAGACATATTGGGCAAGTTCAAGCAG TTTGATTTGATGTGCGGTCTGATCGGCCAGATGCATGAGATTGGGGGGTTGGTGTCGCTA GCGACCATGACGAAGGTGATGAGGAGGCTATGTGGAGCCAACCGATGGAGTGACGCCATT GATGCTTTCCATAAAATGGACCGCTTTGGGGTGGCGAAGGACACAAAGGCCATGAATGTG CTCTTGGACACATTGTGCAAGGAGAGGAGTGTGAAGCGTGCAAGAGGTGCCTTCCAAGCT TTGAAGGGGACAATTCCTCCTGATGAAAGTAGCTTCAACACATTGGTTCATGGCTGGTGC AAAGCAAGGATGCTGAAGGAGGCTCGCGAAACAATGAAGGAGATGGAGCGGCATGGTTTC AGTCCTTCAGTAACGACTTACACCTGCCTGATAGAAGCGTACTGCATGGAGAAAGATTTT CAGACGGTTGATGGTATCTTGGATGAGATGCACACAAAAGGATGCACTCCAAATATTATC ACATACACAATTGTGATGCATGCGCTAGGGAAGGCTGGGAGGACACAAGAAGCTTTGGAT ACTTTTGACAAGGTGAAGCAAGATGGCTGTGCCCTAGATGCTTCTTTCTACAACTGTCTT ATATACATACTATGCAGAGCTGGGAGGTTGCAAGATGCAAATTTTGTGGTCGAAGAAATG CACCGAACTGGAATATCCCCAAACTTGACTACCTTTAACACCCTGATTTCTGCTGCCTGT GATCACTCTCTGGCTGAGAACGCACTTAAATTGTTGGTTCAGATGGAGGAACAGTCATGC AACCCAGATATCAAGACGTACACCCCCTTGCTGAAGCTCTGCTGCAGAAGGAAATGGGTG AAGACGCTTCTGTTCCTGATATGTCATATGTTCCGGAAGGACATCACCCCTGATTTCAGC ACATACACATTGCTGGTGTGCTGGCTATGCCGGAACGGGAGGCTCACCCAGTCCTGCTTA TTCTTGGAGGAGATGGTGCTGAAGGGCTTTACTCCACAGCAGGCGACCTTTGATCTTGTG CTGGAGAAGCTTAAGAACATGCACATGCTTTCAGCAGTGAGAAAGATTCAGCTTCTCAGG ATGCACACAGAAGGTACTAGGTGTAGGAGCGGTGTTCCATCTTATTTGAGAGAGGATGGT CACGATAGACACTGTTATGCTGTATTGTCAAACACTAGTGAAGCTGAATCTTCAATAGAT GGAAAAGAGGTACCTAGAGCTGTGCATATACTGTAA

Peptide Sequence

PEP ID	Zm00001d033992_P018
PEP Infomation	pep chromosome:B73_RefGen_v4:1:280588343:280594545:1 gene:Zm00001d033992 transcript:Zm00001d033992_T018 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:empty pericarp10 description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MDEVSRILRSRFASPEAIVITMDCCPVRVSARLVSKVLSRFSNDWVAAFGFFMWAGTQEG YCHCADSYDMMVDILGKFKQFDLMCGLIGQMHEIGGLVSLATMTKVMRRLCGANRWSDAI DAFHKMDRFGVAKDTKAMNVLLDTLCKERSVKRARGAFQALKGTIPPDESSFNTLVHGWC KARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNII TYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEM HRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIKTYTPLLKLCCRRKWV KTLLFLICHMFRKDITPDFSTYTLLVCWLCRNGRLTQSCLFLEEMVLKGFTPQQATFDLV LEKLKNMHMLSAVRKIQLLRMHTEGTRCRSGVPSYLREDGHDRHCYAVLSNTSEAESSID GKEVPRAVHIL

Transcript Sequence

Transcript ID	Zm00001d033992_T018
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:280588343:280594545:1 gene:Zm00001d033992 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:empty pericarp10 description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	TCCTTGGGGCTTGGAGTATTTGGAAGCAGCGAAACAGGTGTGTTTTTGAAGGAGCTCGAC CCTGCCTTAATACCTTAGAGGATGGATTTAAAGACGAGATGAGATTGTGGGTTTCTGCTG GAGCCAAGAACTTGCGCTCTCTTTTTGACCCTGGATAGAGAAAGGAAAGTCTTATAGCCT ATTAAAAGACGGGGGTGTTGGGGTGTCGTATGTGTCTGTGTGGTGTGTGCTTTGTAAGGG TGAGTGTGTGTTTGTGTTGTGTGTGTTCTGTTTGTCCCGGGCCACAAGCCCTTTTTCCCT CTACTTTAATTTAATGATACGCAACCCTCCTGCGTATTCGAAAAAAAATAATTTTTAAAA CTGAAACCACCTGGTCTTTGCACGTTAGATTGGATGCTGCTGTTTGTATGGAATGTAGCA TCTCATACAGTGCTTTCCTAGTTATTGTATCCTTCACAAATAAAATCCACGCAGAGGTCT AACACTGCTACCAACAGATTCAAGAACACTTCTACCAACATAGGAAACTGAAACAGAATT GTAATCTGAAACTGAAGTATGCTCATCATATATTAAATTGTCACTTTGTCACCGAACATG TAGAATGAATATAAGTAAAACTGAGACAAAAACACATAGGAATCTGAGGCTAAAACTGAG TGAGACTGCTACTGAAACAGATAGGAAACTGAAACTGAAACACATAGGAAACTGAGACAG TGAGACAAACTGAGTGACAAACCTAATATGCTAAGTCATCAAAGCATCGAAATATCAGAG TATCACCAGGTAGATATACGAACATTCAGGCATTGAATCGGAGACTGGGTCACTCTATCA CAAGCTGATTAAGAAGACAAAACAGGTAGTATAATCATGATGAAAGCAGTACCTGTTGAC TCATAGTTCGAACAATAAGACACACAGTTCAGATTTGATCGGCATATTATGAAAAGCGAA TTGACAAATGACATTAGCCTGAGTAAGAAGATGACACATGGAAATAAACAAGAGAGGACC AGCAGATATAATCAGGAAGTGGCGCTCATCTGCATACACTTAAGACCCCATGTGAACTGA ATTCGTGACGCAGTATGATAGGTAGAAAAGAACATTCAGTTCCAGCCACCCAACTGCCGT GAACCTATTTGATGCTACCATCGAAGGTCGAGGTGCTTCTCCAACTTTGAATGTACCTCG CAGGGACACTCCGTCGCCGGGGACCTGATCCGCAGCGCCGACACCTCCGGCACTGTTGAA ATCTTTCCCCCCTCCACCGGCGCCGTTGAAAGCTTTCCCGCCGTCGCCTCCACCGGCGCC GTTGAAAGCTTTCCCGCCGTCGCCTCCACCGGCGCCGTTGAAAGCTTTCCCGCCGTCGCC TCCACCGGCGCCGTTGAAAGCTTTCCCGCCGTCGCCTCCACCGGCGTCGTTGAAAGCTCT CCCACTGCCCCCCCCCCCCAAAAAAACGTTTTTTCGGGAGCTTTTCGCGTCTTCTTGAAG TTGCTCTTATCTGCTAAATGAATCGGCAGCATCCTGCCAATATTTCTTCAAAAAATATAG TATCATTTATGCTTATATGTATTATCTGCTTAATTTTTAACTAGAAATGAAATGATTGTT TTCAGAAAACATCCTTCTCTACCGTGGGGTTCGACCTGCCCGACTGGTTCAGGAACCCAA AGGATGGTTATCCTTGTTCCAGGTTGGATGGCAATGGCGATGATGACTTTGTGCTCCCGG CCAAATCAGACTTCTCAGAACAACAAGGTTGCTCTGCCACCGGTGGAGGATCCAGTCCAC TGTCGATCCTTGCCAGCTGCCCTGCATCCCATGAAGATGCCGAATTTGAGGCCGACATGG ATGAGGTCAGCAGGATTTTGAGATCCCGGTTTGCTTCTCCAGAGGCTATTGTGATCACCA TGGACTGCTGCCCTGTCAGGGTGTCAGCACGCCTTGTCAGCAAGGTCCTGAGCAGGTTCA GCAATGATTGGGTGGCCGCATTTGGGTTCTTCATGTGGGCCGGAACTCAGGAAGGCTACT GTCATTGTGCTGATTCATATGACATGATGGTAGACATATTGGGCAAGTTCAAGCAGTTTG ATTTGATGTGCGGTCTGATCGGCCAGATGCATGAGATTGGGGGGTTGGTGTCGCTAGCGA CCATGACGAAGGTGATGAGGAGGCTATGTGGAGCCAACCGATGGAGTGACGCCATTGATG CTTTCCATAAAATGGACCGCTTTGGGGTGGCGAAGGACACAAAGGCCATGAATGTGCTCT TGGACACATTGTGCAAGGAGAGGAGTGTGAAGCGTGCAAGAGGTGCCTTCCAAGCTTTGA AGGGGACAATTCCTCCTGATGAAAGTAGCTTCAACACATTGGTTCATGGCTGGTGCAAAG CAAGGATGCTGAAGGAGGCTCGCGAAACAATGAAGGAGATGGAGCGGCATGGTTTCAGTC CTTCAGTAACGACTTACACCTGCCTGATAGAAGCGTACTGCATGGAGAAAGATTTTCAGA CGGTTGATGGTATCTTGGATGAGATGCACACAAAAGGATGCACTCCAAATATTATCACAT ACACAATTGTGATGCATGCGCTAGGGAAGGCTGGGAGGACACAAGAAGCTTTGGATACTT TTGACAAGGTGAAGCAAGATGGCTGTGCCCTAGATGCTTCTTTCTACAACTGTCTTATAT ACATACTATGCAGAGCTGGGAGGTTGCAAGATGCAAATTTTGTGGTCGAAGAAATGCACC GAACTGGAATATCCCCAAACTTGACTACCTTTAACACCCTGATTTCTGCTGCCTGTGATC ACTCTCTGGCTGAGAACGCACTTAAATTGTTGGTTCAGATGGAGGAACAGTCATGCAACC CAGATATCAAGACGTACACCCCCTTGCTGAAGCTCTGCTGCAGAAGGAAATGGGTGAAGA CGCTTCTGTTCCTGATATGTCATATGTTCCGGAAGGACATCACCCCTGATTTCAGCACAT ACACATTGCTGGTGTGCTGGCTATGCCGGAACGGGAGGCTCACCCAGTCCTGCTTATTCT TGGAGGAGATGGTGCTGAAGGGCTTTACTCCACAGCAGGCGACCTTTGATCTTGTGCTGG AGAAGCTTAAGAACATGCACATGCTTTCAGCAGTGAGAAAGATTCAGCTTCTCAGGATGC ACACAGAAGGTACTAGGTGTAGGAGCGGTGTTCCATCTTATTTGAGAGAGGATGGTCACG ATAGACACTGTTATGCTGTATTGTCAAACACTAGTGAAGCTGAATCTTCAATAGATGGAA AAGAGGTACCTAGAGCTGTGCATATACTGTAAAAACTACTGTTGATCTCTAGCCTTTTAC ACTTGAATATTGTACTTCTCATTGTATGCTGCTCGTATTTTTCTCTTTTTAATAAGAATT TATGTATATGCACATATCAACCAAGGATGGTTAGTTTTTTTTTCCTCGCACCTTAATCTT GCCTCGATCTGTAGTAATATCTATCTTTTTACCCTTACCAATTGACAAGGGCAGTATATG CTTGTTTTTCCTTGGATTTTTTCACCACCATATTGCATAGCCAGACTGTTTGTTTCGTTG TAATGACATTTACAGGTTCGTTATTAGCATATACAAATTTCGGTGCAGTAATTCTCACTG TGTATATGCTTTTCAGGATATTCAGGGACATCATTTACTCCCCACATAATAAAACTGAAG CCTAACAATTTACTTGAAACCATCATGTGATGTGCCTAAGTTATATTCAGGGGGTATTTT TGTATTCATGATTAAGTGAACTGCTGTTCAAGAACATACTTATTTGTTGAAATGTTGTGG CGTATCCATGTGGCTTACAAAGTCCAGCCATTCTCCAGACCTTATAGTCAACTTTCAACA ACTGAATTTCCATGGAGTTATAGCCACATTTGTCTATTAAAACGGAGCACCAAGAGAGAG TTATATGCCGTTTTTTACTTATAGAACAGGCTTGAAACATTTACGCATTGTCTTTCCACT TCTCCAGCATTTTAACCTTTTATCATCCTTTTCTTAGCTGCTCTGAAACATCCATTTTCT CTGTGCCATCAATGGATGCTTAGCACAGATCGCTTCCACATATCACATGATCAATCAGTA CTGGGCGTATAGCATATTGTTCAGAAGGTTTTTATACCATTGGACAGTCATATGAACTTA TAGATTGGAACCGGATCAATTGACAAAGTTAGTTTACTAATATAAAGATGGATACAGAAT GGTTTTACTGGTTTGATACCTTTGCTCCTTCCTATCTACCATTTCATTTTCATATGAAGT AGTACATGCATATGTTCACATTTTTTCCTTAGACTGATCTAGAGGCAGGGCTTGATCACT AATGATTTCATTTTTATATTTAAAACCATCTGTATAGATTCCTGTAACAGGCTAAGAGCA TCTCCTCAAGAGATTAGCCAAATTTACTGATTTAGCTACTTTGTAAAATAGATTTCACAA AAAAAGAGTTGGGTACTCACAGACTCTAAAATTCAGAGTCTCCATATTCAAAAGCGCCAC CTAAATAGGATTTTTTCAGATTAGAGAGGCTTTCAGCAGCATGGACGACTTTTACTCCTT CAGGTCTGGCTTTTTGGCGCCGCCAGGCCAGACATTTTGTTGCAGGTCGATGCTGTTGCT GGTCGCCGAACAAAGCATGCAGGGGTAGCCATGTCCACCGGCCCGAAAGCACGCAGGCCC AGCCGTGGATACATCCAATGAGGCAACGCGCTTGAGAGGCTTTCCAGTTTGGTCGTGCAT GTAATTGGCAGTGTCTGATGCCTCAACCACCGTGAGCAGACGTCTGGATAATTGGAGGCT AGCACCCGGTCTCCTGCTGCTCAGTGGGGTACATGGTGCCTAGGGGCTGAGCTGCAAGAC GTGAAGACGACGGTGGGAAAACGCGAGGAAAAGAAAAATCTTGGGCCTCCTGCCGGCGTG GGCTTGTGGTGGCGGAGAGGAAGGCACATGTCAAGATGCACTAGCATGACTGTCTTCGAT GAACTTTAACTGCTTTGAGCCTTTGACAAGCAACGAGGCAATTTCCCGTTCTCTATTTAA GACACTTGTGTGTTCGACACCCTTGTGCCTCGCCAAGCTAATATTCTGGTTTGGTTGGTT AGATGATTTGGCTACAACGGCATCTGCAACTATCTCTTGTCAGGGTTTTTAGGGACGTAA GTGCTAGCGCTCGAGTGTGAATCATTATTGTTGCCATTTATGTTATAGTTCGTAAACCAA ACAGTTCTCTAATTGTAAACGTGGATACCGCTTCTTTTGGCTGGTAGCCCACGACTTATT GTTTGCCCCTTCTGGACAAATACCTTAGCAATACAATGCTGAAACGAATCAATGCAGG