Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033917_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:278529542:278532916:-1 gene:Zm00001d033917 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endo-1%2C4-beta-glucanase Cel1
Sequence	ATGTTCGGGCGGGACCCCTGGGGCGGGCCGCTGGAGATCTCCAACGCCGACTCGGCGACG GACGACGACCGGAGCCGCGACCTGGACCGGGCGGCGCTGATGCGGCAGCTGGACGAGACG CAGCAGAGCTGGCTCCTGGCCGGGCCCGGCGACCAGGCCGGCAAGAAGAAGAAGCGGTAC GTCGACCTCGGCTGCGTCGTCGTCGACCGTAAGGTCTTCATGTGGACCGTCGGCACCATC CTCGGCCTCGGCGTCTTCATCGGCTTCGTCATCATGATCGTCAAGCTCGTCCCGCACAAG CGCCCCCCGCCGCCGCCGCCCGACCAGTACACGCAGGCGCTGCACAAGGCGCTCATGTTC TTCAACGCGCAGCGATCCGGCCCGCTGCCGAAGCACAATGGCGTGAGCTGGAGGGGCAAC TCCTGCATGAAGGACGGCCTCTCCGACAGCACCGTCCGCCGGAGCCTGGTCGGAGGCTTC TACGACGCGGGGGACGCCATCAAGTTCAACTACCCCATGGCATGGTCCATGACCATGCTC AGCTGGAGCGTGATCGAGTACAGGGCCAAGTACGAGGCCATCGGCGAGCTCGACCATATC AGGGAGCTCATCAAGTGGGGAACGGACTACATCCTCAAGACCTTCAATTCGTCTGCCGAC ACGATAGACAGGATCGTCGCTCAGGTGGGTGTAGGTGACACCTCTAAAGGCAGCAGTCAG CCTAACGACCATTACTGCTGGATGAGGCCAGAGGACATCGACTACAAGAGGCCGGTCACC GAGTGCCACTCCTGCTCAGATCTAGCGTCGGAAATGGCTGCCGCCCTGGCCGCAGCTTCC ATAGTGTTCAAGAACAGCAAGACCTACTCCGACAAGCTCGTCAAGGGCGCCAAGGCCCTG TACAAGTTCGGCAGGCTGCAGCGTGGGCGATACAGCCCCAACGGATCTGACCAGGCCATC TTCTACAACTCCACCAGCTACTGGGACGAGTTCGTGTGGGGCGGTGCGTGGATGTACTTC GCCACGGGGAACAACTCGTACCTCACCGTCGCCACAGCCCCGGGAATGGCGAAGCACGCT GGAGCATACTGGTTTGGAAGTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCA GGAGCTCAGGTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAA GAAATACTGAGGACATTCCACAACCAAACCGACAACGTCATGTGCTCGTATTTACCTGTA TTCAATTCATTCAACTTCACCAAAGGAGGATTAATACAGCTCAACCATGGAAGGCCTCAA CCGCTTCAGTACGCTGTCAACGCAGCTTTCCTTGCTTCTTTATACAGCGACTATCTTGAA GCGGCTGACACGCCTGGGTGGTACTGTGGACCGAACTTCTACACCATAGAAGTCCTCCGC AAGTTTGCCAGGTCACAGCTTGACTACATCCTTGGAAAGAACCCATTGAAGATGAGCTAC GTTGTGGGTTTCGGAAACAAGTACCCGAAGCGCCCTCACCACAGAGGTGCGTCGATACCT CATAACGGCGTCAAGTATGGATGCAAAGGAGGTTACAAATGGAGGGACACGAAGAAGGCA AACCCTAACATCCTTGTTGGAGCAATGGTGGCTGGCCCTGACAGGCGTGACGGCTACAAA GATGTCCGCACGAACTACAACTACACAGAGCCTACCCTTGCAGCAAACGCTGGCCTGGTT GCAGCACTGATTTCTATATCTGATATCAAAACCGGACGGTTCGGCATCGACAAGAACACC ATCTTCTCTGCGATCCCTCCGATGTTTCCGACACCACCGCCGCCACCATCAGCATGGAAA CCATAG

Peptide Sequence

PEP ID	Zm00001d033917_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:278529542:278532916:-1 gene:Zm00001d033917 transcript:Zm00001d033917_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endo-1%2C4-beta-glucanase Cel1
Sequence	MFGRDPWGGPLEISNADSATDDDRSRDLDRAALMRQLDETQQSWLLAGPGDQAGKKKKRY VDLGCVVVDRKVFMWTVGTILGLGVFIGFVIMIVKLVPHKRPPPPPPDQYTQALHKALMF FNAQRSGPLPKHNGVSWRGNSCMKDGLSDSTVRRSLVGGFYDAGDAIKFNYPMAWSMTML SWSVIEYRAKYEAIGELDHIRELIKWGTDYILKTFNSSADTIDRIVAQVGVGDTSKGSSQ PNDHYCWMRPEDIDYKRPVTECHSCSDLASEMAAALAAASIVFKNSKTYSDKLVKGAKAL YKFGRLQRGRYSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSYLTVATAPGMAKHA GAYWFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPV FNSFNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGWYCGPNFYTIEVLR KFARSQLDYILGKNPLKMSYVVGFGNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKA NPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGIDKNT IFSAIPPMFPTPPPPPSAWKP

Transcript Sequence

Transcript ID	Zm00001d033917_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:278529542:278532916:-1 gene:Zm00001d033917 gene_biotype:protein_coding transcript_biotype:protein_coding description:Endo-1%2C4-beta-glucanase Cel1
Sequence	GCAACGCCCCAACCACCTGATCCCTCCACCCCATCGCACGCCATAACAAAGCAGAGCGCC ACGCCACCACCACCCCAGCTCACTCGTGCCGTGCACTCGACCCATCCACCCGCCAAGACC TCCCATTGCCGCCGCCGAGCCAGCCAGGGGGGGAGAAGAGAGGCCAGCCGCGTCGCGGCG GGCGGAGGAGGAGGACGAGCGGGAGAGCCGAGCCGAGCCGGCCGGGCAGGATGTTCGGGC GGGACCCCTGGGGCGGGCCGCTGGAGATCTCCAACGCCGACTCGGCGACGGACGACGACC GGAGCCGCGACCTGGACCGGGCGGCGCTGATGCGGCAGCTGGACGAGACGCAGCAGAGCT GGCTCCTGGCCGGGCCCGGCGACCAGGCCGGCAAGAAGAAGAAGCGGTACGTCGACCTCG GCTGCGTCGTCGTCGACCGTAAGGTCTTCATGTGGACCGTCGGCACCATCCTCGGCCTCG GCGTCTTCATCGGCTTCGTCATCATGATCGTCAAGCTCGTCCCGCACAAGCGCCCCCCGC CGCCGCCGCCCGACCAGTACACGCAGGCGCTGCACAAGGCGCTCATGTTCTTCAACGCGC AGCGATCCGGCCCGCTGCCGAAGCACAATGGCGTGAGCTGGAGGGGCAACTCCTGCATGA AGGACGGCCTCTCCGACAGCACCGTCCGCCGGAGCCTGGTCGGAGGCTTCTACGACGCGG GGGACGCCATCAAGTTCAACTACCCCATGGCATGGTCCATGACCATGCTCAGCTGGAGCG TGATCGAGTACAGGGCCAAGTACGAGGCCATCGGCGAGCTCGACCATATCAGGGAGCTCA TCAAGTGGGGAACGGACTACATCCTCAAGACCTTCAATTCGTCTGCCGACACGATAGACA GGATCGTCGCTCAGGTGGGTGTAGGTGACACCTCTAAAGGCAGCAGTCAGCCTAACGACC ATTACTGCTGGATGAGGCCAGAGGACATCGACTACAAGAGGCCGGTCACCGAGTGCCACT CCTGCTCAGATCTAGCGTCGGAAATGGCTGCCGCCCTGGCCGCAGCTTCCATAGTGTTCA AGAACAGCAAGACCTACTCCGACAAGCTCGTCAAGGGCGCCAAGGCCCTGTACAAGTTCG GCAGGCTGCAGCGTGGGCGATACAGCCCCAACGGATCTGACCAGGCCATCTTCTACAACT CCACCAGCTACTGGGACGAGTTCGTGTGGGGCGGTGCGTGGATGTACTTCGCCACGGGGA ACAACTCGTACCTCACCGTCGCCACAGCCCCGGGAATGGCGAAGCACGCTGGAGCATACT GGTTTGGAAGTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAGG TTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAAGAAATACTGA GGACATTCCACAACCAAACCGACAACGTCATGTGCTCGTATTTACCTGTATTCAATTCAT TCAACTTCACCAAAGGAGGATTAATACAGCTCAACCATGGAAGGCCTCAACCGCTTCAGT ACGCTGTCAACGCAGCTTTCCTTGCTTCTTTATACAGCGACTATCTTGAAGCGGCTGACA CGCCTGGGTGGTACTGTGGACCGAACTTCTACACCATAGAAGTCCTCCGCAAGTTTGCCA GGTCACAGCTTGACTACATCCTTGGAAAGAACCCATTGAAGATGAGCTACGTTGTGGGTT TCGGAAACAAGTACCCGAAGCGCCCTCACCACAGAGGTGCGTCGATACCTCATAACGGCG TCAAGTATGGATGCAAAGGAGGTTACAAATGGAGGGACACGAAGAAGGCAAACCCTAACA TCCTTGTTGGAGCAATGGTGGCTGGCCCTGACAGGCGTGACGGCTACAAAGATGTCCGCA CGAACTACAACTACACAGAGCCTACCCTTGCAGCAAACGCTGGCCTGGTTGCAGCACTGA TTTCTATATCTGATATCAAAACCGGACGGTTCGGCATCGACAAGAACACCATCTTCTCTG CGATCCCTCCGATGTTTCCGACACCACCGCCGCCACCATCAGCATGGAAACCATAGAGAG ACAGACCTCTGAATATCCGCCCCCCCCCCCCCCCCCCCCCCCCCAAAAAAAAAAGCATCA ACACAGGGAAGTGGAGCAAACGCCAGGAACAGGAAAGCGGACAGCATAAGCTTATAGAGC TTCTATTTCTGTACCAGTGTGACAGATCAGTATAAAATCCTCTGTCATACATAGACCAGA AGTTGTGTGCATCGCGTGAAAGCTAATTTTTGGGGTCTTGTTGCTGTGGGCATTCCTGCT CATGTGTGAAGTTATTTTTTGTAGAAATTGTACCTTTACAAATTGTTATAGGAGTGACTT TTCATAGTAGTAAA