Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033884_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:277357877:277359445:-1 gene:Zm00001d033884 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 4 description:SMAD/FHA domain-containing protein
Sequence	ATGGCGGATCCGCCGCCTGTGCTTACTCTCCTGGTGAAGAAGGGCCCCTGCAAGGGGAAT ACCCTGCAGCGCTGCGCCGGCACCGAGGCGCTCCGTGTCGGCCGCGTTGCCAAGGGCAAC GACCTCTCCGTGGGCGACGCGGGCGCGTCGCAGAGGCATCTCTCCGTCGAGTTCCTCCCG CCGCCTGCGGCCCGGTGGACCGTCACCGATCTAGGCTCCTCGAACGGCACCCTCCTCAAC GCTACGCCTCTCGTGGCCACTATCCCCGCTCCGCTATCCGACGGGGATCTCATCAAGATC GGGGAGACAACCGTGCTCGCCGTCTCCATATCGACCGATGCAGGCCCGGGACCGGGCCCC GTCGCGACAAGGCGTTCCAGGCGAAACGCAGCGGCGGCGGCGGATGAACAGGGCCCGGCT GTTCCTCGCAGGGCTGGACGGAGGAAGGCTGGTGCGACGGAAGCCCCCGAAGCTGGGAAT GAAGTGGAGGAGGAAGCTGCATTGCCGACTCGCCGAGGCGGGCGGAGGAAGACCGTTGAG CCCGCTAGGGTAGAGACGGAAGCGGAAGATGAAGAGGAGGAAGCGGCAATACCGCGCCGT GGCAGGTCGAGGAAGGCTGCAGCCACGGTCGTCCTTCCTCCACAGCCGCAAAATACGAGG TCAACGAGAGCTGCTGCAAGGAAAGGTGACGTATTGGGGTGCGAAAACGATGAGGGGAAA GTGATGAGGACCGGAAGGGGACGAGGACGGGTTACAAGGTCAAGTGCAAGGAATGATACA GGTGTTACTCAGGAGGAAGAGGAGGGTGAGGTGGCTGTGGCCAGAGATCGGGAAGGGACA GCTGCCGGGGGCAAGGATGAGGTGGTGCCGGCGGCTGGGAGAGTTCAAGCAAAGAGGAGC AGAGGAGGCAGAGGCCGAGGAAGGGCTACGACGGCAAGTACAAGGAAGGCTGAGGATGCG GTTGCTGAGAACGATGAAAATGAGCAAGAGGAAAGGGATATGGCTGATGGCAGAGAACGA GGGGGGAGTCCATTGAGGGTGTTGGCCGTGAATGATGGTTCTGAAGTGGATAAGGTGGCA ACTGAGGACAAGTTGGATGGAACTTCAAAGGCATCCATGGAAGATGAGAAGATGGAGGAT TTGACATTGACAGAGAGGGCAATAAAGGGGAGTGCCAATGTTAAGCATGCTCCTGCTGAC AATGGTGGTGTGGAAGAAGAGGAGGTGAAGAATTTGAGCAAGGGAGAGGAAACTGAAGTA TATCAGGAATTGAGGGAAAAGGTTTCACCAGGGTCAAAGCCTGATGGTGTTGGAGAAGTG GAAAAGAATGAAAAGAGGGAAGCTGTTGGTGCCAGTGGAGAGAGAGGCCATGTTGGGGTC GGGGAGCCCAAAGGAAGACACAGATTGGAGAATATGACACTGGGGGAGTGGTTTGTTCAG ATCGAGAAATACCTTCTAGCAAAGAATGAAGAAGCTGCTGAAAAGGCGATAGCTGAAGTG CAAGAGAAACATCGGTGGTTTTGTGAACATGTTAAAACCCTCAAGCTCAAAAAGAGTCTT GCTCCTTGA

Peptide Sequence

PEP ID	Zm00001d033884_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:277357877:277359445:-1 gene:Zm00001d033884 transcript:Zm00001d033884_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 4 description:SMAD/FHA domain-containing protein
Sequence	MADPPPVLTLLVKKGPCKGNTLQRCAGTEALRVGRVAKGNDLSVGDAGASQRHLSVEFLP PPAARWTVTDLGSSNGTLLNATPLVATIPAPLSDGDLIKIGETTVLAVSISTDAGPGPGP VATRRSRRNAAAAADEQGPAVPRRAGRRKAGATEAPEAGNEVEEEAALPTRRGGRRKTVE PARVETEAEDEEEEAAIPRRGRSRKAAATVVLPPQPQNTRSTRAAARKGDVLGCENDEGK VMRTGRGRGRVTRSSARNDTGVTQEEEEGEVAVARDREGTAAGGKDEVVPAAGRVQAKRS RGGRGRGRATTASTRKAEDAVAENDENEQEERDMADGRERGGSPLRVLAVNDGSEVDKVA TEDKLDGTSKASMEDEKMEDLTLTERAIKGSANVKHAPADNGGVEEEEVKNLSKGEETEV YQELREKVSPGSKPDGVGEVEKNEKREAVGASGERGHVGVGEPKGRHRLENMTLGEWFVQ IEKYLLAKNEEAAEKAIAEVQEKHRWFCEHVKTLKLKKSLAP

Transcript Sequence

Transcript ID	Zm00001d033884_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:277357877:277359445:-1 gene:Zm00001d033884 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 4 description:SMAD/FHA domain-containing protein
Sequence	ATGGCGGATCCGCCGCCTGTGCTTACTCTCCTGGTGAAGAAGGGCCCCTGCAAGGGGAAT ACCCTGCAGCGCTGCGCCGGCACCGAGGCGCTCCGTGTCGGCCGCGTTGCCAAGGGCAAC GACCTCTCCGTGGGCGACGCGGGCGCGTCGCAGAGGCATCTCTCCGTCGAGTTCCTCCCG CCGCCTGCGGCCCGGTGGACCGTCACCGATCTAGGCTCCTCGAACGGCACCCTCCTCAAC GCTACGCCTCTCGTGGCCACTATCCCCGCTCCGCTATCCGACGGGGATCTCATCAAGATC GGGGAGACAACCGTGCTCGCCGTCTCCATATCGACCGATGCAGGCCCGGGACCGGGCCCC GTCGCGACAAGGCGTTCCAGGCGAAACGCAGCGGCGGCGGCGGATGAACAGGGCCCGGCT GTTCCTCGCAGGGCTGGACGGAGGAAGGCTGGTGCGACGGAAGCCCCCGAAGCTGGGAAT GAAGTGGAGGAGGAAGCTGCATTGCCGACTCGCCGAGGCGGGCGGAGGAAGACCGTTGAG CCCGCTAGGGTAGAGACGGAAGCGGAAGATGAAGAGGAGGAAGCGGCAATACCGCGCCGT GGCAGGTCGAGGAAGGCTGCAGCCACGGTCGTCCTTCCTCCACAGCCGCAAAATACGAGG TCAACGAGAGCTGCTGCAAGGAAAGGTGACGTATTGGGGTGCGAAAACGATGAGGGGAAA GTGATGAGGACCGGAAGGGGACGAGGACGGGTTACAAGGTCAAGTGCAAGGAATGATACA GGTGTTACTCAGGAGGAAGAGGAGGGTGAGGTGGCTGTGGCCAGAGATCGGGAAGGGACA GCTGCCGGGGGCAAGGATGAGGTGGTGCCGGCGGCTGGGAGAGTTCAAGCAAAGAGGAGC AGAGGAGGCAGAGGCCGAGGAAGGGCTACGACGGCAAGTACAAGGAAGGCTGAGGATGCG GTTGCTGAGAACGATGAAAATGAGCAAGAGGAAAGGGATATGGCTGATGGCAGAGAACGA GGGGGGAGTCCATTGAGGGTGTTGGCCGTGAATGATGGTTCTGAAGTGGATAAGGTGGCA ACTGAGGACAAGTTGGATGGAACTTCAAAGGCATCCATGGAAGATGAGAAGATGGAGGAT TTGACATTGACAGAGAGGGCAATAAAGGGGAGTGCCAATGTTAAGCATGCTCCTGCTGAC AATGGTGGTGTGGAAGAAGAGGAGGTGAAGAATTTGAGCAAGGGAGAGGAAACTGAAGTA TATCAGGAATTGAGGGAAAAGGTTTCACCAGGGTCAAAGCCTGATGGTGTTGGAGAAGTG GAAAAGAATGAAAAGAGGGAAGCTGTTGGTGCCAGTGGAGAGAGAGGCCATGTTGGGGTC GGGGAGCCCAAAGGAAGACACAGATTGGAGAATATGACACTGGGGGAGTGGTTTGTTCAG ATCGAGAAATACCTTCTAGCAAAGAATGAAGAAGCTGCTGAAAAGGCGATAGCTGAAGTG CAAGAGAAACATCGGTGGTTTTGTGAACATGTTAAAACCCTCAAGCTCAAAAAGAGTCTT GCTCCTTGA