Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033795_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:1:273938109:273946448:-1 gene:Zm00001d033795 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dihydroxyacetone kinase
Sequence

ATGGAACTTATGATTGCAGCGAGAAAAGCAGTTCCTGAGTTGCAATTGGTGTATGGCATT
GCTGTTGACAGAGTCTACACTGGCACACTTATGACATCACTTGATATGGCAGGATTATCT
ATTACCATTATGAAGTCCGGCGAAAGCATTTTGAAGAGACTTGATGCTCCCACTAAAGCT
CCAGCTTGGCCTGTTGGTTCTGAAGGAAACCGTCCACCAGCAAAGTTTCCTGTTCCTCTA
CCACCATCACCTTCAATGAAGGATGACGAGATTCTTGCTCCATCTCAGGAGCTGAGCAAG
CAAGGGTGTATCCTGGAGGCTGTTATTGAAGCAAGTGCTACTGAAATTATCAATCTCATG
GATAGCCTAAATGAATGGGACAGTAAAGTGGGCGATGGTGACTGTGGAAGCACAATGTAT
AGAGGTGCAACAGCTATTCTTGAAGATATGAAAAAGCGTTACCCTATGAATGATGCAGCG
GGAACAATAAATGAAATTGGGGCAACAATCCGAAGGGTGATGGGTGGAACAAGTGGAATC
TTGTATGCCATACTCTGCAAGGCTGCGTATGCAAGCTTAAAGCAGAGCTCAACTGTCACT
GCGAATAAATGGGCTGATGCTTTAGAGGCCTCCATTGCTGCTGTTAGCAAATATGGTGGT
GCCAGCGCAGGATACCGCACAATGTTGGATGCCCTAATTCCTGCTTCTGCTGTTCTGAAA
CAGAGACTTGAGGCTGGGGATGATCCCGTGACTGCTTTCATCGCGTCTTCTGAAGCAGCA
TCAGCTGGCGCTGAATCCACCAAACAAATGCAAGCGAAGGCTGGACGGTCATCATACATC
GCTCCAGATCTCCTGGCCTCAATCCCTGATCCTGGTGCAATGGCTGCAGCTGCATGGTAC
AGAGCTGCTGCCCTTGCAGTGAAGAACAAAGTGCACGGTTCAAAGAGCTAG

Peptide Sequence

PEP ID

Zm00001d033795_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:1:273938109:273946448:-1 gene:Zm00001d033795 transcript:Zm00001d033795_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dihydroxyacetone kinase
Sequence

MELMIAARKAVPELQLVYGIAVDRVYTGTLMTSLDMAGLSITIMKSGESILKRLDAPTKA
PAWPVGSEGNRPPAKFPVPLPPSPSMKDDEILAPSQELSKQGCILEAVIEASATEIINLM
DSLNEWDSKVGDGDCGSTMYRGATAILEDMKKRYPMNDAAGTINEIGATIRRVMGGTSGI
LYAILCKAAYASLKQSSTVTANKWADALEASIAAVSKYGGASAGYRTMLDALIPASAVLK
QRLEAGDDPVTAFIASSEAASAGAESTKQMQAKAGRSSYIAPDLLASIPDPGAMAAAAWY
RAAALAVKNKVHGSKS

Transcript Sequence

Transcript ID

Zm00001d033795_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:273938109:273946448:-1 gene:Zm00001d033795 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dihydroxyacetone kinase
Sequence

ACAGAACGAGTGAGGCCAGGCGACTTCATACTGCTCGCCTCGCCGTCTTTCCCCCAATCT
GTTGCTCCTCCAAGCTGCGGGCGATCGCCGTACCCCGGCCGCCGCAGGGAACCCCCTCGC
CATGGCCTTGCAGGGGAAGAAGCTCATCAACAACCCCGACGATGTGGTGACGGAGTTCAT
CGAAGGGTTGGTGGAGACTTACCCGGGTCTGCAGTACCTCGACGGGTTCCCTCAGATTAA
GGTCGTTCTTCGTGCTGATGTCGAGCGCGGTTCCTATGACAAAGTTGCAGTCATCTCGGG
TGGTGGAAGTGGCCATGAACCTTCCCATGCTGGATTTGTTGGGCCAGGGATGTTGACAGC
TGCTGTTTCTGGAGATGTTTTCGCCTCTCCACCTGTTGATTCTATTTTAGCTGCTATTCG
AGCTGTAACTGGTCCCATGGGGTGCCTTCTAATAGTAAAGAACTACACTGGTGATAGACT
CAATTTTGGATTAGCTGCTGAGCAGGCAAAATCTGAAGGCTATAAGATGGAGATGGTCAT
TGTTGGAGACGATTGTGCCCTTCCTCCACCTAGAGGGATAGCTGGTAGAAGAGGTTTAGC
TGGAACAATTCTTGTGCATAAGGTTGCTGGGGCCGCAGCAGATGCTGGTTTATCTCTTGC
AGAGGTTGCCGCAGAAGCAAAACATGCATCTGAGGTTGTTGGTACGATGGGAGTTGCACT
TTCTGTTTGCACATTGCCTGGGCAAATAACTTCTGATCGTCTAGGTCCAAGGCAAATGGA
GCTTGGCCTTGGAATTCATGGAGAACCTGGAGTTGCTGTTGTTGAACTCCAGCCAGTTGA
CGTAGTGGTAGAACATGTCCTTAAACAGATATTGTCACAGGTCAGATTTTGATCTGCAAT
GTTTGTTTAATCCTCTACGTTTATATATTTGTCTTTGTTGAACTAAATGCAAAGTTTATT
TGTTTTCCACACCACAGGCACACATAGCACTACATTTTCTGTCATATTTCTCTGTTTAAT
TCAAAATCCTATTTTGCATAATTTGCGAAGTCTAATGCTGAACTGTGTGTAGCGTCGATT
AATTATTTGGAAAAGGCAAAAACTGTAGTTTGTCTCAGACATATCCTTTTTTTGTTTACC
AAAAAAGTATCATGTTTTTATTAAGAAAAGACAACCCTGGATTACTGGAGAGTGGAGAGG
TAATGATTACAATGGGGATTGAATGTGTATTCCAAGGAACGAGGACTAATCCTCTCCTGC
TATGGTTTTCCTTAAGTGGAACATTATACAACTGTAAACTGTTTATCTGTTTCACACTCT
CCGTAATGGCATTATGTAAAAAGGGGACTTTCTATGGCAGTATAGCTAGCTTGTATGCTT
TTAATTATTCATTTGGTAGCCTTGCACCCTTGCAGGAAACTCAGTATCTTCCTGTCACAA
GAGGTTGCAATGCTGTTCTCCTAGTGAATGGGTAATGCAAATCTGAACATTTCTCGCCAC
TGTATAAATTGAATAATATTTGTGGAATCAGTAGAACTAGGTTAATTGTATCTTGTATGT
ATTCCCTATATTTTTTTCATCTTTCATGATGAACTAAGGTGCACATTTTCAATGTTGGTT
AGTTGGTTTTGGTGATCTCATTGCTCATTCTTTTTTATGGGTTACTGTGGAAATCATTTC
CTGTAAACTTATCCTGGATATACAACACTAGACTTGAAGCAGTGAAAAAATTATCGTACA
TGGAAGAAAGCAACAAGAAATTAAGGATTATGAGTATGTTTCAGTTGGAGACTTCTATTT
TCCCTTGTCAATGTCAAAGGGATCTGGTTGGAAGGTTGCATATCAATGTCACCTGTACCC
AAGTCGTTATCTTTTATGGATAATTTCTTTGTTTACTGATGGTGGCCGGGGTAAGGGGCA
TCCATTTTGAATTCCTGAAAGATTACTTATTACCATCTCTATAGCACCTCATTACGCCGC
TCAGATATTCCAGAGGTTAGGAATAGCTGGAAAGGCTCACAGGACTGATTCAGACATAGC
ATTAGAAATGTTCTCTTTTCTTTTTCAAATATAACTTTGGCCTTCCTACTACATTAATAA
CTTCTGCTTATTAGTTGTTACAAATGTATTTTTAATGATAAATATATATGAGAGGATTGG
GAGCTTGTGGCAGCATGTTTATGATACTGTCTACCTATATCAAATCCTACTTAGAGGTTA
GAATTCACTTTTTTCTGATGATCTCTTTGAAAGCGTACATTACTTATTTACTTTATCAGT
GTAGCTATTTCCTTTCTCCCCACTGTTTGTTCTGAATTGAGTACAGTTTGTAACTTTGTT
CTTTAACCCCATCTCTAATTTGCAGATTAGGAGCCACTCCTATCATGGAACTTATGATTG
CAGCGAGAAAAGCAGTTCCTGAGTTGCAATTGGTGTATGGCATTGCTGTTGACAGAGTCT
ACACTGGCACACTTATGACATCACTTGATATGGCAGGATTATCTATTACCATTATGAAGT
CCGGCGAAAGCATTTTGAAGAGACTTGATGCTCCCACTAAAGCTCCAGCTTGGCCTGTTG
GTTCTGAAGGAAACCGTCCACCAGCAAAGTTTCCTGTTCCTCTACCACCATCACCTTCAA
TGAAGGATGACGAGATTCTTGCTCCATCTCAGGAGCTGAGCAAGCAAGGGTGTATCCTGG
AGGCTGTTATTGAAGCAAGTGCTACTGAAATTATCAATCTCATGGATAGCCTAAATGAAT
GGGACAGTAAAGTGGGCGATGGTGACTGTGGAAGCACAATGTATAGAGGTGCAACAGCTA
TTCTTGAAGATATGAAAAAGCGTTACCCTATGAATGATGCAGCGGGAACAATAAATGAAA
TTGGGGCAACAATCCGAAGGGTGATGGGTGGAACAAGTGGAATCTTGTATGCCATACTCT
GCAAGGCTGCGTATGCAAGCTTAAAGCAGAGCTCAACTGTCACTGCGAATAAATGGGCTG
ATGCTTTAGAGGCCTCCATTGCTGCTGTTAGCAAATATGGTGGTGCCAGCGCAGGATACC
GCACAATGTTGGATGCCCTAATTCCTGCTTCTGCTGTTCTGAAACAGAGACTTGAGGCTG
GGGATGATCCCGTGACTGCTTTCATCGCGTCTTCTGAAGCAGCATCAGCTGGCGCTGAAT
CCACCAAACAAATGCAAGCGAAGGCTGGACGGTCATCATACATCGCTCCAGATCTCCTGG
CCTCAATCCCTGATCCTGGTGCAATGGCTGCAGCTGCATGGTACAGAGCTGCTGCCCTTG
CAGTGAAGAACAAAGTGCACGGTTCAAAGAGCTAGTAGCATACGCAATGCTTCATTGCTA
GACCCAAAATAGACTGACAGGAAAAATCACTGGGGCATTTTCTCACTCCCCTTAGATTTG
GTTTCCGCTTGTGCTTTTGCATGGGCCGAGAAAAAAAATGACTTCCATATTGTCTCACCC
TTCTCACATCATACAAAGAGATGTTCAAAGAGTTCGTCGTCCGTACAAGTTAAGGGAAGC
TATGCTTTTGCACTGCCGTGATATCTCAGCATGCTGTCAGTGTTGGAATGACCATTGTTT
AATTTGCCCGAGTTTCGTT