Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033750_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:1:272772409:272780685:1 gene:Zm00001d033750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Threonine dehydratase biosynthetic chloroplastic
Sequence

ATGGCATTATCCTTGTGTCATGGTAAGAGGGTCATGTTGGAGCATGTTGGTGGGTTTGCT
GATGGTGTAGCTGTCAAAGCTGTTGGGGAAGAAACATTTCGCCTGTGCAGAGAGCTAGTA
GATGGCATTGTTATGGTCAGTCGAGATGCTATTTGTGCTTCAATAAAGGATATGTTTGAG
GAGAAAAGAAGTATCCTTGAACCTGCTGGTGCCCTTGCATTGGCTGGGGCTGAAGCCTAC
TGCAAATACTATAACTTGAAAGGAGAAACTGTGGTTGCAATAACTAGTGGGGCAAATATG
AACTTTGATCGACTTAGACTAGTAACCGAGCTAGCTGATGTTGGCCGAAAACGGGAAGCA
GTGTTAGCTACATTTCTGCCAGAGCGGCAGGGAAGCTTCAAAAAATTCACAGAATTGGTT
GGCAGGATGAATATTACTGAATTCAAATACAGATACGATTCTAATGCAAAAGATGCCCTT
GTTCTTTACAGTGTTGGCATCTACACTGACAATGAGCTTGGAGCAATGATGGATCGCATG
GAATCTGCGAAACTGAGGACTGTTAACCTTACTGACAATGATTTGGCAAAGGACCACCTT
AGATACTTTATTGGAGGAAGATCAGAAATAAAAGATGAACTGGTTTACCGGTTCATTTTC
CCGGAAAGGCCTGGGGCCCTTATGAAATTTTTGGACACGTTTAGTCCTCGTTGGAACATC
AGCCTTTTCCATTACCGTGCACAGGGTGAAGCTGGAGCAAATGTATTAGTTGGTATACAA
GTGCCGCCAGCAGAATTTGATGAATTCAAGAGTCATGCCAACAATCTTGGGTACGAGTAC
ATGTCAGAGCACAACAATGAGATATACCGGTTGCTGTTGCGTGACCCAAAGGTCTAA

Peptide Sequence

PEP ID

Zm00001d033750_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:1:272772409:272780685:1 gene:Zm00001d033750 transcript:Zm00001d033750_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Threonine dehydratase biosynthetic chloroplastic
Sequence

MALSLCHGKRVMLEHVGGFADGVAVKAVGEETFRLCRELVDGIVMVSRDAICASIKDMFE
EKRSILEPAGALALAGAEAYCKYYNLKGETVVAITSGANMNFDRLRLVTELADVGRKREA
VLATFLPERQGSFKKFTELVGRMNITEFKYRYDSNAKDALVLYSVGIYTDNELGAMMDRM
ESAKLRTVNLTDNDLAKDHLRYFIGGRSEIKDELVYRFIFPERPGALMKFLDTFSPRWNI
SLFHYRAQGEAGANVLVGIQVPPAEFDEFKSHANNLGYEYMSEHNNEIYRLLLRDPKV

Transcript Sequence

Transcript ID

Zm00001d033750_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:272772409:272780685:1 gene:Zm00001d033750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Threonine dehydratase biosynthetic chloroplastic
Sequence

ACAGGTGAAAATAATTGGAGTGGAACCCTCAGATGCAAATGCAATGGCATTATCCTTGTG
TCATGGTAAGAGGGTCATGTTGGAGCATGTTGGTGGGTTTGCTGATGGTGTAGCTGTCAA
AGCTGTTGGGGAAGAAACATTTCGCCTGTGCAGAGAGCTAGTAGATGGCATTGTTATGGT
CAGTCGAGATGCTATTTGTGCTTCAATAAAGGATATGTTTGAGGAGAAAAGAAGTATCCT
TGAACCTGCTGGTGCCCTTGCATTGGCTGGGGCTGAAGCCTACTGCAAATACTATAACTT
GAAAGGAGAAACTGTGGTTGCAATAACTAGTGGGGCAAATATGAACTTTGATCGACTTAG
ACTAGTAACCGAGCTAGCTGATGTTGGCCGAAAACGGGAAGCAGTGTTAGCTACATTTCT
GCCAGAGCGGCAGGGAAGCTTCAAAAAATTCACAGAATTGGTTGGCAGGATGAATATTAC
TGAATTCAAATACAGATACGATTCTAATGCAAAAGATGCCCTTGTTCTTTACAGTGTTGG
CATCTACACTGACAATGAGCTTGGAGCAATGATGGATCGCATGGAATCTGCGAAACTGAG
GACTGTTAACCTTACTGACAATGATTTGGCAAAGGACCACCTTAGATACTTTATTGGAGG
AAGATCAGAAATAAAAGATGAACTGGTTTACCGGTTCATTTTCCCGGAAAGGCCTGGGGC
CCTTATGAAATTTTTGGACACGTTTAGTCCTCGTTGGAACATCAGCCTTTTCCATTACCG
TGCACAGGGTGAAGCTGGAGCAAATGTATTAGTTGGTATACAAGTGCCGCCAGCAGAATT
TGATGAATTCAAGAGTCATGCCAACAATCTTGGGTACGAGTACATGTCAGAGCACAACAA
TGAGATATACCGGTTGCTGTTGCGTGACCCAAAGGTCTAATGTATATGCCTTTGCTCCCA
TAATAAGTTGGTGACACTTTTCAAGGAAGATTTTGCTCCAAGGTAGAAGTTGCGAGTTTC
TTCAAGTTGAAATGAAGCCATCACCAAATGTAGCTTCGGTGTGCCATCTGTTTACTCAGT
TAGATCATGTAGTGTATCAGTTGTGTATCTTTGTTGTTGTGCTTCGTGATCTCAATTTAT
TGCTTTGTGCACCTAGAGGTTGTCAAATAATGATAACCGATATGTTATCTAAATATCTAA
TAATGATTATGTGATTGTGATTTGGGCCGCATCACTGCTGTAAAGTGTAAACCCTTGTCT
CTGCAACATGAGTTATCAACAAATTTAAGATTTGAATGTTCTTTCTTT