Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033731_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:272370663:272372249:-1 gene:Zm00001d033731 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCGCGCCCCGCCCTCTGCCGGCGGCTTCAACTCGCCGTGGACGCTCGCCATTCGCGCG GCGGCAGACCAAGGCCGGCCCCGCCGCGCCATCGCTCTGTACCTCGCGTCCCTACGCTCG TCCTGCCGCCCCTGCCCCTTCGCACTCGCCGCCGTCCTCAAGTCTGTGCCCCGCCTTCCC GAGCACGCCGTTCTCCCCGCGGCGGCCTCCCTCCACGCGCACCTCCTCCGCCTCGGCCTC CTCTCCCACCCCTATCCGCACGCCGCGCTCTCTCACCTCTACTCCCACCTCCTCCCCCCG CACCACAACCACGCCCGTGGCCTGCTTGATGACGCGCCAACGCCGCTGAACCGCCACTCC CTCGTCTCGTCCAATTCGCTCCTCGCTTCCCTCCTACGCGCGGGTGATATCCCTGCCGCG CGCGCCATGTTCGAAGCAATGCCCGCGCGGGACGTTGTGTCGTGGAACTCCATGGTTGCT GGACTCGCCAAGGCCGGACACCTGGACGAGGCCATCGAGATGTTCGACCAAATGCCCGAG ACGAACGTCGCATCCTGGAACGCCCTCGTGTCCGGATTCATGGCACAAGGCCACCTAGCC CAAGCGCAGGAGCTGTTTGAGCGGATGCCCACCAGGAACAACGTTTCCTGGATCACGATG ATCTCAGGGTACGCCAAGGCCGGTGACGTCCAAGCTGCTGCTAACCTGTTTGATAGGATG GGCAGTAAGGACCTTTATGCATGGAATGCGATGATCTCATGCTATGCACAAAATGGCTGC GCAAGGGAGGCACTTGGCATTTTTAACAGAATGTTGAAGCCACATATTTGGGTGGTACCC AATGAGAAGACTTTTTCCTCTGTGATCTCGGCATGTTCACAGCTGGGGGACTTAAGGTTC GGCTTGTGGGTTGAGAATTTCATGGGCTATGTGGGGGTTGATCTGGATGATCACTTGCGT ACAGCTCTGGTTGATTTGTACACCAAGAGTGGGCGAATGGATAGGGCTTTTGATTTGTTC AGAGGATTGAGATCAAGGGATGTGGTGTCTTACAGCGCAATGATAGTGGGCTGTGGAATG CATGGCAAGTTAAATGAAGCTGTTGGCTTGTTCAAGGAGATGTCCAAAGCAAGGATTGAT CCTAATGCGGTGACCTTTGTGGGGTTGCTATCTGCATACAGTCACGCGGGACTGCTGGAA GAAGCTCGTGCTTGTTTCACTTCCATGACAAGCAGATACAGAATTAATCCTTCAATGGAA CACTACACTATTATGGTAGACATTCTTGGGCGCTGTGGAAAGTTGGAAGAAGCATTCCAG CTGGTCATGCAGATACCTGTATGCCCAGATGCCAGTGTTTGGGGTGCCTTGCTTCTTGCT TGCAGGTTGCACAACAACATTGAGCTTGGGGAAGTTGTTGCTTCCAAGTGCTTTGAACTG GAGCCACAAGAGAGTGGATATTACATTCTCTTGGGTAACATATATGCGCAAGCAAAGAAG TGGGACAAGGTTAAGGGTTTGAGGAAGATGATGGCAGAAAGGGGTTTGAGTAAGACACCC GGGAGTAGCTGGGTGCATGTTGCATGA

Peptide Sequence

PEP ID	Zm00001d033731_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:272370663:272372249:-1 gene:Zm00001d033731 transcript:Zm00001d033731_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MRAPPSAGGFNSPWTLAIRAAADQGRPRRAIALYLASLRSSCRPCPFALAAVLKSVPRLP EHAVLPAAASLHAHLLRLGLLSHPYPHAALSHLYSHLLPPHHNHARGLLDDAPTPLNRHS LVSSNSLLASLLRAGDIPAARAMFEAMPARDVVSWNSMVAGLAKAGHLDEAIEMFDQMPE TNVASWNALVSGFMAQGHLAQAQELFERMPTRNNVSWITMISGYAKAGDVQAAANLFDRM GSKDLYAWNAMISCYAQNGCAREALGIFNRMLKPHIWVVPNEKTFSSVISACSQLGDLRF GLWVENFMGYVGVDLDDHLRTALVDLYTKSGRMDRAFDLFRGLRSRDVVSYSAMIVGCGM HGKLNEAVGLFKEMSKARIDPNAVTFVGLLSAYSHAGLLEEARACFTSMTSRYRINPSME HYTIMVDILGRCGKLEEAFQLVMQIPVCPDASVWGALLLACRLHNNIELGEVVASKCFEL EPQESGYYILLGNIYAQAKKWDKVKGLRKMMAERGLSKTPGSSWVHVA

Transcript Sequence

Transcript ID	Zm00001d033731_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:272370663:272372249:-1 gene:Zm00001d033731 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCGCGCCCCGCCCTCTGCCGGCGGCTTCAACTCGCCGTGGACGCTCGCCATTCGCGCG GCGGCAGACCAAGGCCGGCCCCGCCGCGCCATCGCTCTGTACCTCGCGTCCCTACGCTCG TCCTGCCGCCCCTGCCCCTTCGCACTCGCCGCCGTCCTCAAGTCTGTGCCCCGCCTTCCC GAGCACGCCGTTCTCCCCGCGGCGGCCTCCCTCCACGCGCACCTCCTCCGCCTCGGCCTC CTCTCCCACCCCTATCCGCACGCCGCGCTCTCTCACCTCTACTCCCACCTCCTCCCCCCG CACCACAACCACGCCCGTGGCCTGCTTGATGACGCGCCAACGCCGCTGAACCGCCACTCC CTCGTCTCGTCCAATTCGCTCCTCGCTTCCCTCCTACGCGCGGGTGATATCCCTGCCGCG CGCGCCATGTTCGAAGCAATGCCCGCGCGGGACGTTGTGTCGTGGAACTCCATGGTTGCT GGACTCGCCAAGGCCGGACACCTGGACGAGGCCATCGAGATGTTCGACCAAATGCCCGAG ACGAACGTCGCATCCTGGAACGCCCTCGTGTCCGGATTCATGGCACAAGGCCACCTAGCC CAAGCGCAGGAGCTGTTTGAGCGGATGCCCACCAGGAACAACGTTTCCTGGATCACGATG ATCTCAGGGTACGCCAAGGCCGGTGACGTCCAAGCTGCTGCTAACCTGTTTGATAGGATG GGCAGTAAGGACCTTTATGCATGGAATGCGATGATCTCATGCTATGCACAAAATGGCTGC GCAAGGGAGGCACTTGGCATTTTTAACAGAATGTTGAAGCCACATATTTGGGTGGTACCC AATGAGAAGACTTTTTCCTCTGTGATCTCGGCATGTTCACAGCTGGGGGACTTAAGGTTC GGCTTGTGGGTTGAGAATTTCATGGGCTATGTGGGGGTTGATCTGGATGATCACTTGCGT ACAGCTCTGGTTGATTTGTACACCAAGAGTGGGCGAATGGATAGGGCTTTTGATTTGTTC AGAGGATTGAGATCAAGGGATGTGGTGTCTTACAGCGCAATGATAGTGGGCTGTGGAATG CATGGCAAGTTAAATGAAGCTGTTGGCTTGTTCAAGGAGATGTCCAAAGCAAGGATTGAT CCTAATGCGGTGACCTTTGTGGGGTTGCTATCTGCATACAGTCACGCGGGACTGCTGGAA GAAGCTCGTGCTTGTTTCACTTCCATGACAAGCAGATACAGAATTAATCCTTCAATGGAA CACTACACTATTATGGTAGACATTCTTGGGCGCTGTGGAAAGTTGGAAGAAGCATTCCAG CTGGTCATGCAGATACCTGTATGCCCAGATGCCAGTGTTTGGGGTGCCTTGCTTCTTGCT TGCAGGTTGCACAACAACATTGAGCTTGGGGAAGTTGTTGCTTCCAAGTGCTTTGAACTG GAGCCACAAGAGAGTGGATATTACATTCTCTTGGGTAACATATATGCGCAAGCAAAGAAG TGGGACAAGGTTAAGGGTTTGAGGAAGATGATGGCAGAAAGGGGTTTGAGTAAGACACCC GGGAGTAGCTGGGTGCATGTTGCATGA