Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033726_T036
CDS Infomation	cds chromosome:B73_RefGen_v4:1:272332540:272346419:1 gene:Zm00001d033726 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable serine/threonine protein kinase IREH1
Sequence	ATGACATGTAAGACTCGTTTTGGACCAAAATCTGATCATGGAATGGCCACATCATCCGCT GGAAGTATGACTCCTAGGTCTCCATTAACTCCAAGATCAAATCATATAGACATGCTTTTA GCTGGTAAAAATGCAATTAATGAGAGTGGTGATCTTCCGCAGATTGTCGAACTTGCTGAT ATTGCACGATGCATAGCAAATACCCCTCTGGATGAAGAAAGCGCATTATCCCAAATGGTT ACCTGCATAGAAGATCTTCAAGAAATTGTCAACCGCAGGAAGCATGAGGCCCTCACAGTC CAGACATTTGGAACACGCATAGAAAAACTACACAGGGAGAAGTATCTGCAGCTCTGTGAC TCAGTTGATATGGACAAGGTTGATTCAGCAAGCACCATAATGGATGAAGAAGATGATGTT GTTCGTAGCTTGCGCGCAAGTCCTGTCCATCCAGTCAAGGATCGCACTTCAATTGATGAC TTTGAAATCATGAAACCTATTAGCCGTGGAGCATTTGGACGTGTTTTCTTGGCCAAGAAA AGAACTACAGGAGATCTTTTTGCTATAAAGGTTCTTAGGAAGGCAGATATGATTCGGAAA AATGCTGTCGAGAGTATATTGGCTGAACGTGATATCTTGATTACAGTCAGGAACCCTTTT GTGGTACGCTTTTTCTATTCGTTTACCTCACGGGAGAATTTGTATCTGGTCATGGAGTAC CTGAATGGAGGGGACCTTTACTCATTACTGAGGAATTTAGGGTGCCTGGATGAAGACGTT GCTCGTGTATATCTTGCAGAAGTTGTACTAGCTTTGGAATATTTGCACTCTATGCACATA GTCCATAGGGATCTAAAGCCTGACAACTTGTTGATAGCCCATGATGGACATATTAAGTTG ACAGATTTTGGGTTGTCCAAGGTTGGTTTGATCAACAGCACAGATCTGTCTGGTCCTGCT GTTAGTGGGGCTTCACTGTATGGAGATGATGAGCCTCAGATGAATGAGCTCGAACAAATG GATCACCGAGCACGGAGACAAAATCGTTCTGCTGTTGGAACTCCTGATTATTTAGCACCA GAAATCCTTTTGGGGACAGGACATGGTTGCAGTGCAGATTGGTGGTCTGTTGGTGTCATT CTGTTTGAGCTCATTGTTGGCATACCTCCATTCAATGCAGAACACCCCGAGGCAATTTTT GAAAATATTATGAATCGCAAAATACCTTGGCCACATGTCCCAGAAGAGATGAGTTTTGAT GCACAAGATTTAATTGACAGATTATTGACAGAAGATCCTCATCAACGACTAGGAGCAAAT GGTGCCTCAGAGGTTAAACAACATCCATTTTTCAAAGACATTAGCTGGGATACCCTTGCT AGGCAGAAGGCTGCCTTTGTTCCTTCCTCCGATAGTGCATTTGATACTAGCTACTTCACC AGTCGCTATTCTTGGAATCAATCAGATGAAAACATATATGAAGCATATGAGTTAGAGGAC TCCAGTGATAATGGAAGCCTTAGTGGAAGCAGTAGTTGTGTGAGTAACCAAGATGACATG GGGGAGGACAGCACTGGCCTCAATGAGTTTGAATCTAGTGCAAATGTCAATTATTCTTTC AGCAACTTCTCGTTCAAGAATCTATCACAACTTGCTTCCATCAACTACGATCTGCTCACC AAAGGATTGAAGGATGATCCACCGCCAAGAACAGAAATGTAG

Peptide Sequence

PEP ID	Zm00001d033726_P036
PEP Infomation	pep chromosome:B73_RefGen_v4:1:272332540:272346419:1 gene:Zm00001d033726 transcript:Zm00001d033726_T036 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable serine/threonine protein kinase IREH1
Sequence	MTCKTRFGPKSDHGMATSSAGSMTPRSPLTPRSNHIDMLLAGKNAINESGDLPQIVELAD IARCIANTPLDEESALSQMVTCIEDLQEIVNRRKHEALTVQTFGTRIEKLHREKYLQLCD SVDMDKVDSASTIMDEEDDVVRSLRASPVHPVKDRTSIDDFEIMKPISRGAFGRVFLAKK RTTGDLFAIKVLRKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTSRENLYLVMEY LNGGDLYSLLRNLGCLDEDVARVYLAEVVLALEYLHSMHIVHRDLKPDNLLIAHDGHIKL TDFGLSKVGLINSTDLSGPAVSGASLYGDDEPQMNELEQMDHRARRQNRSAVGTPDYLAP EILLGTGHGCSADWWSVGVILFELIVGIPPFNAEHPEAIFENIMNRKIPWPHVPEEMSFD AQDLIDRLLTEDPHQRLGANGASEVKQHPFFKDISWDTLARQKAAFVPSSDSAFDTSYFT SRYSWNQSDENIYEAYELEDSSDNGSLSGSSSCVSNQDDMGEDSTGLNEFESSANVNYSF SNFSFKNLSQLASINYDLLTKGLKDDPPPRTEM

Transcript Sequence

Transcript ID	Zm00001d033726_T036
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:272332540:272346419:1 gene:Zm00001d033726 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable serine/threonine protein kinase IREH1
Sequence	TCCTTCAATGACATGTAAGACTCGTTTTGGACCAAAATCTGATCATGGAATGGCCACATC ATCCGCTGGAAGTATGACTCCTAGGTCTCCATTAACTCCAAGATCAAATCATATAGACAT GCTTTTAGCTGGTAAAAATGCAATTAATGAGAGTGGTGATCTTCCGCAGATTGTCGAACT TGCTGATATTGCACGATGCATAGCAAATACCCCTCTGGATGAAGAAAGCGCATTATCCCA AATGGTTACCTGCATAGAAGATCTTCAAGAAATTGTCAACCGCAGGAAGCATGAGGCCCT CACAGTCCAGACATTTGGAACACGCATAGAAAAACTACACAGGGAGAAGTATCTGCAGCT CTGTGACTCAGTTGATATGGACAAGGTTGATTCAGCAAGCACCATAATGGATGAAGAAGA TGATGTTGTTCGTAGCTTGCGCGCAAGTCCTGTCCATCCAGTCAAGGATCGCACTTCAAT TGATGACTTTGAAATCATGAAACCTATTAGCCGTGGAGCATTTGGACGTGTTTTCTTGGC CAAGAAAAGAACTACAGGAGATCTTTTTGCTATAAAGGTTCTTAGGAAGGCAGATATGAT TCGGAAAAATGCTGTCGAGAGTATATTGGCTGAACGTGATATCTTGATTACAGTCAGGAA CCCTTTTGTGGTACGCTTTTTCTATTCGTTTACCTCACGGGAGAATTTGTATCTGGTCAT GGAGTACCTGAATGGAGGGGACCTTTACTCATTACTGAGGAATTTAGGGTGCCTGGATGA AGACGTTGCTCGTGTATATCTTGCAGAAGTTGTACTAGCTTTGGAATATTTGCACTCTAT GCACATAGTCCATAGGGATCTAAAGCCTGACAACTTGTTGATAGCCCATGATGGACATAT TAAGTTGACAGATTTTGGGTTGTCCAAGGTTGGTTTGATCAACAGCACAGATCTGTCTGG TCCTGCTGTTAGTGGGGCTTCACTGTATGGAGATGATGAGCCTCAGATGAATGAGCTCGA ACAAATGGATCACCGAGCACGGAGACAAAATCGTTCTGCTGTTGGAACTCCTGATTATTT AGCACCAGAAATCCTTTTGGGGACAGGACATGGTTGCAGTGCAGATTGGTGGTCTGTTGG TGTCATTCTGTTTGAGCTCATTGTTGGCATACCTCCATTCAATGCAGAACACCCCGAGGC AATTTTTGAAAATATTATGAATCGCAAAATACCTTGGCCACATGTCCCAGAAGAGATGAG TTTTGATGCACAAGATTTAATTGACAGATTATTGACAGAAGATCCTCATCAACGACTAGG AGCAAATGGTGCCTCAGAGGTTAAACAACATCCATTTTTCAAAGACATTAGCTGGGATAC CCTTGCTAGGCAGAAGGCTGCCTTTGTTCCTTCCTCCGATAGTGCATTTGATACTAGCTA CTTCACCAGTCGCTATTCTTGGAATCAATCAGATGAAAACATATATGAAGCATATGAGTT AGAGGACTCCAGTGATAATGGAAGCCTTAGTGGAAGCAGTAGTTGTGTGAGTAACCAAGA TGACATGGGGGAGGACAGCACTGGCCTCAATGAGTTTGAATCTAGTGCAAATGTCAATTA TTCTTTCAGCAACTTCTCGTTCAAGAATCTATCACAACTTGCTTCCATCAACTACGATCT GCTCACCAAAGGATTGAAGGATGATCCACCGCCAAGAACAGAAATGTAGCAGTTAATCTA AATTTGGATGGACTCATTTGAGTACTCAGACAGTCTACAAGGTGCTCGTGGGATGTAGGT CTTGTACATATCAAAGTGTGAGGCATGGTCTGTTCCTATTGAGGCTGTTCCTACATCTCG CGGATCCGAGTACAGTTTTGGTGTTGCCTTGTTTTCATGACTATTGCCATGCCATCATCA GTGAAATCACCCTTGAC