Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033684_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:271169683:271173500:-1 gene:Zm00001d033684 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phytanoyl-CoA dioxygenase
Sequence	ATGCCGCCAGCCAGTAGCCTCACCGCCGACCAGCTCAGCTTCTTCGAGGCCAATGGGTAC CTCGTGATGGACTCGTTCTCGAGCGCGGAGGAGGTGCGGGAGATGCGGGACCGCATGGCC GACCTTGTCGCTGGGTTCGATGGCGCCAACTCCGCGGTGTTCTCCACCAAGGATCATCGG CAGTTAAAGGACGACTACTTCTTTAAGAGTGCTGAGAATATCTCATTCTTCTTTGAGGAA AAGGCATATGGAGATGATGGATGCTTGAAACAGCCGAAAGAACTTTCAATTAATAAAGTT GGGCATGCATTACATGAACTTGATCCGGTGTTCAAAAAGTTTTCTTTCTCAGAGAGTGTT GCAAGCTTGTTCTCTTCTTTAGGCTACAAGAGGCCTGCAGTCATTCAATCTATGTACATA TTTAAGCAACCAGGTATTGGTGGTGAGGTCGTGCCGCACCAGGATAATACATTCCTTTAC ACGGAACCTCGTACATGCACAGGGCTGTGGCTTGCACTTGAAGATGCAACAATCAACAAT GGTTGCCTGTGGGCAATTCCAGGATCACATAAAAAGGGTTTGGTGAGACGTATGGTCAGA GATGAAAATGGTACACATTTTGATCGGCCCTCCCCAGTCTATGATCAGAAAGAATTTGTA CCGCTGGAAGTAAAATCTGGTGCTTTGGTGGTTATACATGGAGATCTTATACATCAGAGT TTTGAGAACCTTTCTCCAGCGTCAAGACATGCATTCAGCTTACATGTAGTGGATACTGAA GGATGTAAATGGTCCGAAGACAACTGGATACAAAGGAAAACGGCCCCTGAACCGCTCTAT GTGTCTTAG

Peptide Sequence

PEP ID	Zm00001d033684_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:271169683:271173500:-1 gene:Zm00001d033684 transcript:Zm00001d033684_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phytanoyl-CoA dioxygenase
Sequence	MPPASSLTADQLSFFEANGYLVMDSFSSAEEVREMRDRMADLVAGFDGANSAVFSTKDHR QLKDDYFFKSAENISFFFEEKAYGDDGCLKQPKELSINKVGHALHELDPVFKKFSFSESV ASLFSSLGYKRPAVIQSMYIFKQPGIGGEVVPHQDNTFLYTEPRTCTGLWLALEDATINN GCLWAIPGSHKKGLVRRMVRDENGTHFDRPSPVYDQKEFVPLEVKSGALVVIHGDLIHQS FENLSPASRHAFSLHVVDTEGCKWSEDNWIQRKTAPEPLYVS

Transcript Sequence

Transcript ID	Zm00001d033684_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:271169683:271173500:-1 gene:Zm00001d033684 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phytanoyl-CoA dioxygenase
Sequence	GCGTCTCGAGAAGAAGTTCCGTACCCTTCACTCCACTATTCCGGTCAACCCATCCCTTTC CTCCGCCTCCGCTTCCGCGTCCGCCCGCCGCTATGCCGCCAGCCAGTAGCCTCACCGCCG ACCAGCTCAGCTTCTTCGAGGCCAATGGGTACCTCGTGATGGACTCGTTCTCGAGCGCGG AGGAGGTGCGGGAGATGCGGGACCGCATGGCCGACCTTGTCGCTGGGTTCGATGGCGCCA ACTCCGCGGTGTTCTCCACCAAGGATCATCGGCAGTTAAAGGACGACTACTTCTTTAAGA GTGCTGAGAATATCTCATTCTTCTTTGAGGAAAAGGCATATGGAGATGATGGATGCTTGA AACAGCCGAAAGAACTTTCAATTAATAAAGTTGGGCATGCATTACATGAACTTGATCCGG TGTTCAAAAAGTTTTCTTTCTCAGAGAGTGTTGCAAGCTTGTTCTCTTCTTTAGGCTACA AGAGGCCTGCAGTCATTCAATCTATGTACATATTTAAGCAACCAGGTATTGGTGGTGAGG TCGTGCCGCACCAGGATAATACATTCCTTTACACGGAACCTCGTACATGCACAGGGCTGT GGCTTGCACTTGAAGATGCAACAATCAACAATGGTTGCCTGTGGGCAATTCCAGGATCAC ATAAAAAGGGTTTGGTGAGACGTATGGTCAGAGATGAAAATGGTACACATTTTGATCGGC CCTCCCCAGTCTATGATCAGAAAGAATTTGTACCGCTGGAAGTAAAATCTGGTGCTTTGG TGGTTATACATGGAGATCTTATACATCAGAGTTTTGAGAACCTTTCTCCAGCGTCAAGAC ATGCATTCAGCTTACATGTAGTGGATACTGAAGGATGTAAATGGTCCGAAGACAACTGGA TACAAAGGAAAACGGCCCCTGAACCGCTCTATGTGTCTTAGCAAAACCAGTAACTAGTGC CGTAAAACAATAGAGATTCCCAGCAAGTGATTTGTGGATCGCTTCTCTGCACAATAAAAT GGGGGAATCAAGCTGCGCCATGCTGTTTCCGTTTCACCTGTAAACATATGAGGGCTTGTT CGGTTATTTCCAATACACATGGATTGGATGGGATTGAAAAAAATTGAGAAGAAGTTTGAC TTGTTTGGGATTCAAACTCATTCAATCCCACTCAATCCACATGGATTGAGAGCTAACCGA ACAAGCCCTAAACTGTAAATACTATTGCTACTGTAATACCATAAAAAATCTCTCTCGGCT GGGTAGGAGAAAGACTGCCTCTACGATATTATATTAAAAAGAAGCTCAATCGGAGTC