Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033682_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:270986023:270996966:-1 gene:Zm00001d033682 gene_biotype:protein_coding transcript_biotype:protein_coding description:Toc64

Sequence

ATGGCGTCCTCAGGGGCCGCCGCTAACCTCTGGGTACTGCTTGGTCTCGGCATCGCGGGC
GTTCTCCTGGCGGCGCGGCGACTGAGGCGCCCTGCGCGCCCCGATCACGGCGCCTTCGTC
GCCCGCCTCGAGCTCCTCCCGCCGCCCCAGCCTCCGCCGCCGCAGGCGCCCCACCCGCTC
ACCGGACTCTGCTTCGCCATCGCTGACGCATTGCATGTCAGTGGTTATATTACAAGTTTC
GGCAGTCTTGAATGGGCAAAGACACACAATGCAGAAGTGCTAACATCTTCAGTGGTTTCA
GCTCTTGTTGATGGTGGTGCTATTTGTGTTGGGAAAACTGTTATTGATGAGATGGCATAC
AGTATCCATGGTGAGAATAGATATTTTGATACACCAACAAATCCTGCCGCTCCAGATCGA
GTACCAGGAGGATGTTCAAGTGGATCAGCTGTTGCAGTTGCTGGTGGAATGGTAGATTTT
GCCCTGGGTATTGACTCGATTGGAGGTGTAAGGATACCTGGTGCTTATTGTGGTGTCTTA
GCATTCAGGCCTTCGCATGCTGTGGTTTCCAATAGTGGTGTCATTCCTGTTGCACCTAGC
CTGGACACTATAGGTTGGTTTGCAAAGGATCCAAGTGTTTTGCATCGTGTTGGGCATCTT
CTTCTTAGACTTCCTTATGCTGGTATTCGCCAACCGAGAATTTTTTACATAGCAGATGAT
TGCTTTGAACTTTCAAAGATACCTGCTAGGAGACTTACTCAGGTGGTGACAAAATCTGTG
GAGAAGCTCTTTGGAAGACAAGTCCGGCATGTGAATCTCGAAAATTATTTGAGTTCAAGA
ATATCCAGCCTGGGTAACTATTCAAATGGGCATAAGAATGGGGATTCAAAGTTCCCTCTG
TTGCTAGCACTTTGTAACTCCATGATATCACTTCACAAGCAGGAATTCAAAGATAAGCAT
ATGGAGTGGATAAATTCAGTTAAGCCTGCTGTGGATGCACGCATAGTCAGTGATTTGTCT
GAGGATGGTGATTCAGATATTGATGGCTGCCAAAATGTGAGGAAAGAAGCGCGCTCTGCT
CTAAGTGGACTTCTTAAGGATGATGGGATTCTGGTGATTCCAACTGCTTTGGGGTGCCCC
CCGAAGCTTAACGCTAAGGAACTCTCGTCTGAAAGCTACAATTCTCAGACACTACGCCTT
TTGTCTTTAGCTAGCATGTCAGGGTGTTGCCAGGTTTCCATTCCTTTGGGTACACATGAT
AAGTGCCCCATTTCAGTTTCGTTGATTGCTAGGCATGGTGGTGATCGGTTTTTGTTGGAC
ACCACACAAACCATGTATACAACCATCCAAGAGCAAGTGGAGATACTAGCGAAATCTAGT
GTTTCAAGTAAACAGGCGATGAATGAAGAAGCAGCTGAAGCTGCTAAAGAGAAAGGTAAT
GCTGCATTTAAGGAAAAACAATGGCAAAAGGCAGTAAATTTCTACACTGAAGCAATAAAG
TTAAATGGAAAAGTGGCTACATACTACAGCAACAGAGCTGCTGCCTTTCTAGAACTAACT
AGCTACCGTCAGGCTGAGGCAGATTGCACAAGTGCCATCGAACTTGATTCCAAGAGCGTG
AAAGCTTATTTACGGAGAGGCACTGCAAGGGAGATGCTAGGTTATTATAAGGAGGCCGTT
GATGATTTCAACCACGCCCTTGTTCTAGAACCAATGAACAAGACGGCTGGTGTTGCCATC
AACAGGTTAAAGAAGCTGTTTCCTTGA

Peptide Sequence

PEP ID

Zm00001d033682_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:270986023:270996966:-1 gene:Zm00001d033682 transcript:Zm00001d033682_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Toc64

Sequence

MASSGAAANLWVLLGLGIAGVLLAARRLRRPARPDHGAFVARLELLPPPQPPPPQAPHPL
TGLCFAIADALHVSGYITSFGSLEWAKTHNAEVLTSSVVSALVDGGAICVGKTVIDEMAY
SIHGENRYFDTPTNPAAPDRVPGGCSSGSAVAVAGGMVDFALGIDSIGGVRIPGAYCGVL
AFRPSHAVVSNSGVIPVAPSLDTIGWFAKDPSVLHRVGHLLLRLPYAGIRQPRIFYIADD
CFELSKIPARRLTQVVTKSVEKLFGRQVRHVNLENYLSSRISSLGNYSNGHKNGDSKFPL
LLALCNSMISLHKQEFKDKHMEWINSVKPAVDARIVSDLSEDGDSDIDGCQNVRKEARSA
LSGLLKDDGILVIPTALGCPPKLNAKELSSESYNSQTLRLLSLASMSGCCQVSIPLGTHD
KCPISVSLIARHGGDRFLLDTTQTMYTTIQEQVEILAKSSVSSKQAMNEEAAEAAKEKGN
AAFKEKQWQKAVNFYTEAIKLNGKVATYYSNRAAAFLELTSYRQAEADCTSAIELDSKSV
KAYLRRGTAREMLGYYKEAVDDFNHALVLEPMNKTAGVAINRLKKLFP

Transcript Sequence

Transcript ID

Zm00001d033682_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:270986023:270996966:-1 gene:Zm00001d033682 gene_biotype:protein_coding transcript_biotype:protein_coding description:Toc64

Sequence

TAGAAAGCAATCGCCCGCGGTATTATCCATCCACCACGCTGCATCTGCTTCTCACGCCGC
CTCGCCTTCCTCTTCCACCCCTCGCCGTCCGTCGTCCTCAGCGCTTGTACGCTTGCCTCA
AAACCCCTGGCGCCGTGCTAAAACCCTAGCCCTCGAATTCCTTCCCCTGCCCGCGCGGAG
CAGACGAGCCTGAGCCCGTCCTCCTCGTCCATGGCGTCCTCAGGGGCCGCCGCTAACCTC
TGGGTACTGCTTGGTCTCGGCATCGCGGGCGTTCTCCTGGCGGCGCGGCGACTGAGGCGC
CCTGCGCGCCCCGATCACGGCGCCTTCGTCGCCCGCCTCGAGCTCCTCCCGCCGCCCCAG
CCTCCGCCGCCGCAGGCGCCCCACCCGCTCACCGGACTCTGCTTCGCCATCGCTGACGCA
TTGCATGTCAGTGGTTATATTACAAGTTTCGGCAGTCTTGAATGGGCAAAGACACACAAT
GCAGAAGTGCTAACATCTTCAGTGGTTTCAGCTCTTGTTGATGGTGGTGCTATTTGTGTT
GGGAAAACTGTTATTGATGAGATGGCATACAGTATCCATGGTGAGAATAGATATTTTGAT
ACACCAACAAATCCTGCCGCTCCAGATCGAGTACCAGGAGGATGTTCAAGTGGATCAGCT
GTTGCAGTTGCTGGTGGAATGGTAGATTTTGCCCTGGGTATTGACTCGATTGGAGGTGTA
AGGATACCTGGTGCTTATTGTGGTGTCTTAGCATTCAGGCCTTCGCATGCTGTGGTTTCC
AATAGTGGTGTCATTCCTGTTGCACCTAGCCTGGACACTATAGGTTGGTTTGCAAAGGAT
CCAAGTGTTTTGCATCGTGTTGGGCATCTTCTTCTTAGACTTCCTTATGCTGGTATTCGC
CAACCGAGAATTTTTTACATAGCAGATGATTGCTTTGAACTTTCAAAGATACCTGCTAGG
AGACTTACTCAGGTGGTGACAAAATCTGTGGAGAAGCTCTTTGGAAGACAAGTCCGGCAT
GTGAATCTCGAAAATTATTTGAGTTCAAGAATATCCAGCCTGGGTAACTATTCAAATGGG
CATAAGAATGGGGATTCAAAGTTCCCTCTGTTGCTAGCACTTTGTAACTCCATGATATCA
CTTCACAAGCAGGAATTCAAAGATAAGCATATGGAGTGGATAAATTCAGTTAAGCCTGCT
GTGGATGCACGCATAGTCAGTGATTTGTCTGAGGATGGTGATTCAGATATTGATGGCTGC
CAAAATGTGAGGAAAGAAGCGCGCTCTGCTCTAAGTGGACTTCTTAAGGATGATGGGATT
CTGGTGATTCCAACTGCTTTGGGGTGCCCCCCGAAGCTTAACGCTAAGGAACTCTCGTCT
GAAAGCTACAATTCTCAGACACTACGCCTTTTGTCTTTAGCTAGCATGTCAGGGTGTTGC
CAGGTTTCCATTCCTTTGGGTACACATGATAAGTGCCCCATTTCAGTTTCGTTGATTGCT
AGGCATGGTGGTGATCGGTTTTTGTTGGACACCACACAAACCATGTATACAACCATCCAA
GAGCAAGTGGAGATACTAGCGAAATCTAGTGTTTCAAGTAAACAGGCGATGAATGAAGAA
GCAGCTGAAGCTGCTAAAGAGAAAGGTAATGCTGCATTTAAGGAAAAACAATGGCAAAAG
GCAGTAAATTTCTACACTGAAGCAATAAAGTTAAATGGAAAAGTGGCTACATACTACAGC
AACAGAGCTGCTGCCTTTCTAGAACTAACTAGCTACCGTCAGGCTGAGGCAGATTGCACA
AGTGCCATCGAACTTGATTCCAAGAGCGTGAAAGCTTATTTACGGAGAGGCACTGCAAGG
GAGATGCTAGGTTATTATAAGGAGGCCGTTGATGATTTCAACCACGCCCTTGTTCTAGAA
CCAATGAACAAGACGGCTGGTGTTGCCATCAACAGGTTAAAGAAGCTGTTTCCTTGAATA
TGAAGCTGCATGAAGATATGATAACCTCATATTTTGTGCACACACAAGGGGTGGGATTGA
AGTACCTGAGTTCAACCGACGGATGCTGATCACAGTTTGAGCTAGTGGGAACGGATTTCA
ACACTGAGATCAGGTTAAGGGTCAATTTAGCGGTTTCTCTCCCCACCCAAAGTTTTGGAA
AAGCAAAATAAAGAAGGTTTTTTGGGAACCGGAAAGCAGTTTACGGGTGTCCGCCATCCC
CACCATGTATAATATAGTTTCGCCAATTATTTGTTCAGACGCTTTGCCAATCGAACTTTT
TCTGCCATGCTTACCTGTACCCATCTCTCCTTGCCGTTCTGAGCGGCAGCTTTTTTGCGG
GCTCGCTCTGAAAACGGCTGCCACCAGTGAGGTCGCTCGTGGAGGCTGTTAGGCGGCCAT
GTGCTGACGCGCAGTCGCTTCGCCGGCTGAACCTTTCAGCCCTTTCAGTTTCGGTTGTTT
GCT