Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033652_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:1:269683309:269688890:-1 gene:Zm00001d033652 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable LRR receptor-like serine/threonine-protein kinase

Sequence

ATGGGCTCCCGTTCCGGAACAGCACCACCAGCGGTCAATTTCGACGCCTGGAGTCAACCG
GCCGAGTCGTCCACCTACGCCTTCACAGTTCACACGCGCGGCGGCGGCGGCGGCGGTGGA
GCGGGTGATGAGGGAAGTGGCGTGAACCACCGAATCTCGCGGTCGCGGAGCGGGCGTCGC
GGGCGAACGAGCCCCGGTCTCTCTCTTCTCTGCGCTAATAATAGAAGAAAGATGGACCTG
CTCAGCATCATTCTAGTTATAGCATCTCTGCTCCCATTCGCAGCATCTGATGGTCAAGGT
GATGCCTTGTACGATATGAAGCTGAAACTAAATGCTACTGGCAGTCAGCTTTCTGACTGG
AACCAAAATCAAGTCAACCCATGCACCTGGAATTCTGTTATTTGTGACAACAACAACCAT
GTTGTGCAAGTAACATTGGCTTCTATGGGGTTTACTGGAGTTCTGTCACCAAGAATCGGA
GATCTGGAGTATTTAAATGTTCTGTCCTTGCCTGGTAACAACATCTCTGGTGGCATACCA
GAAGAATTTGGCAACCTCTCTCGATTGACAAGCTTAGATTTGGAAGACAACCTGTTGGTT
GGGCCAATACCAGCTTCACTTGGCAGGCTTTCAAAGCTCCAGCTTCTGATACTAAGTCAA
AACAATCTCAATGGCTCTATTCCTGATACACTAGCAAGCATTTTAAGCTTGACAGACATT
CGGCTGGCTTACAATAAACTCACTGGTCAAATACCTTCCCAGTTGTTTCAAGTTGCACGT
TACAATTTTTCAGGTAATAACTTGACATGTGGAGCAAACTTCCTCCATCCATGTGCCTCA
AATATGTCTTACCAAGGTTCTTCCCGTGGTTCGACAATAGGCATTGTGCTTGGGACAGTT
GGAGGTCTTATGGGGCTTCTAATCATATGGGCTGTATTCATTATCTGCAATGGAAGGAGG
AAAAGCCATCTACGTGAAATATTTGTGGATGTATCAGGTGAGGATGATCGTAGAATTGCA
TTTGGCCAGTTGAAAAGATTTGCATGGCGAGAATTGCAACTTGCAACTGATAATTTCAGT
GAGAAAAATGTTCTTGGACAAGGGGGTTTTGGGAAAGTATATAAAGGAGCACTTCCAGAT
GGCACTAAGATTGCTGTAAAACGGTTAACTGATTACGAAAGTCCAGGTGGAGAGGCTGCT
TTCTTGCGTGAGGTTGAGCTAATTAGTGTTGCAGTTCACCGGAATCTTTTAAGATTGATT
GGTTTCTGTACAACACAAACAGAGCGCCTACTTGTTTATCCTTTCATGCAAAATCTTAGT
GTGGCCTACCGTCTACGAGAATTTAAACCTGGGGAGCCAATATTAGACTGGTCCGCAAGG
AAGCGAGTGGCTATAGGCACAGCTCGTGGACTGGAGTATTTGCACGAGCACTGCAATCCT
AAGATTATACATCGTGACGTCAAGGCTGCCAATGTCTTGCTTGATGAAGGTTTTGAACCG
GTGGTTGGGGATTTCGGCCTGGCCAAGCTGGTGGACGTGCAGAAGACGTCCGTGACTACC
CAGGTCCGTGGAACCATGGGTCACATCGCCCCCGAATACCTGTCCACTGGGAAGTCCTCC
GAGAGAACCGATGTTTTTGGCTATGGCATAATGCTTCTTGAGCTAGTCACTGGTCAGCGT
GCCATCGACTTTTCACGTCTGGAGGAAGAAGATGACGTGTTGTTACTTGACCATGTCAAG
AAGCTGCAGAGGGAAGGGCATCTCGACGCCATCGTTGACCGCAACTTGAACAGCTGTTAC
AACGGGCAGGAGGTGGAGATGATGATCCAGATCGCGCTGCTCTGCACGCAGGCGTCGCCC
GAGGACCGCCCGTCCATGTCCGAGGTGGTCCGGATGCTGGAGGGCGAGGGCCTCGCCGAG
AGGTGGGAGGAGTGGCAGCAGGTGGAGGTGACGAGGAGGCAGGACTACGAGCGGATGCAG
CAGCGCTTCGACTGGGGCGAGGACTCCATCTACAACCAGGACGCGATCGAACTGTCCGCC
GGCAGGTGA

Peptide Sequence

PEP ID

Zm00001d033652_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:1:269683309:269688890:-1 gene:Zm00001d033652 transcript:Zm00001d033652_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable LRR receptor-like serine/threonine-protein kinase

Sequence

MGSRSGTAPPAVNFDAWSQPAESSTYAFTVHTRGGGGGGGAGDEGSGVNHRISRSRSGRR
GRTSPGLSLLCANNRRKMDLLSIILVIASLLPFAASDGQGDALYDMKLKLNATGSQLSDW
NQNQVNPCTWNSVICDNNNHVVQVTLASMGFTGVLSPRIGDLEYLNVLSLPGNNISGGIP
EEFGNLSRLTSLDLEDNLLVGPIPASLGRLSKLQLLILSQNNLNGSIPDTLASILSLTDI
RLAYNKLTGQIPSQLFQVARYNFSGNNLTCGANFLHPCASNMSYQGSSRGSTIGIVLGTV
GGLMGLLIIWAVFIICNGRRKSHLREIFVDVSGEDDRRIAFGQLKRFAWRELQLATDNFS
EKNVLGQGGFGKVYKGALPDGTKIAVKRLTDYESPGGEAAFLREVELISVAVHRNLLRLI
GFCTTQTERLLVYPFMQNLSVAYRLREFKPGEPILDWSARKRVAIGTARGLEYLHEHCNP
KIIHRDVKAANVLLDEGFEPVVGDFGLAKLVDVQKTSVTTQVRGTMGHIAPEYLSTGKSS
ERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQREGHLDAIVDRNLNSCY
NGQEVEMMIQIALLCTQASPEDRPSMSEVVRMLEGEGLAERWEEWQQVEVTRRQDYERMQ
QRFDWGEDSIYNQDAIELSAGR

Transcript Sequence

Transcript ID

Zm00001d033652_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:269683309:269688890:-1 gene:Zm00001d033652 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable LRR receptor-like serine/threonine-protein kinase

Sequence

ATGGGCTCCCGTTCCGGAACAGCACCACCAGCGGTCAATTTCGACGCCTGGAGTCAACCG
GCCGAGTCGTCCACCTACGCCTTCACAGTTCACACGCGCGGCGGCGGCGGCGGCGGTGGA
GCGGGTGATGAGGGAAGTGGCGTGAACCACCGAATCTCGCGGTCGCGGAGCGGGCGTCGC
GGGCGAACGAGCCCCGGTCTCTCTCTTCTCTGCGCTAATAATAGAAGAAAGATGGACCTG
CTCAGCATCATTCTAGTTATAGCATCTCTGCTCCCATTCGCAGCATCTGATGGTCAAGGT
GATGCCTTGTACGATATGAAGCTGAAACTAAATGCTACTGGCAGTCAGCTTTCTGACTGG
AACCAAAATCAAGTCAACCCATGCACCTGGAATTCTGTTATTTGTGACAACAACAACCAT
GTTGTGCAAGTAACATTGGCTTCTATGGGGTTTACTGGAGTTCTGTCACCAAGAATCGGA
GATCTGGAGTATTTAAATGTTCTGTCCTTGCCTGGTAACAACATCTCTGGTGGCATACCA
GAAGAATTTGGCAACCTCTCTCGATTGACAAGCTTAGATTTGGAAGACAACCTGTTGGTT
GGGCCAATACCAGCTTCACTTGGCAGGCTTTCAAAGCTCCAGCTTCTGATACTAAGTCAA
AACAATCTCAATGGCTCTATTCCTGATACACTAGCAAGCATTTTAAGCTTGACAGACATT
CGGCTGGCTTACAATAAACTCACTGGTCAAATACCTTCCCAGTTGTTTCAAGTTGCACGT
TACAATTTTTCAGGTAATAACTTGACATGTGGAGCAAACTTCCTCCATCCATGTGCCTCA
AATATGTCTTACCAAGGTTCTTCCCGTGGTTCGACAATAGGCATTGTGCTTGGGACAGTT
GGAGGTCTTATGGGGCTTCTAATCATATGGGCTGTATTCATTATCTGCAATGGAAGGAGG
AAAAGCCATCTACGTGAAATATTTGTGGATGTATCAGGTGAGGATGATCGTAGAATTGCA
TTTGGCCAGTTGAAAAGATTTGCATGGCGAGAATTGCAACTTGCAACTGATAATTTCAGT
GAGAAAAATGTTCTTGGACAAGGGGGTTTTGGGAAAGTATATAAAGGAGCACTTCCAGAT
GGCACTAAGATTGCTGTAAAACGGTTAACTGATTACGAAAGTCCAGGTGGAGAGGCTGCT
TTCTTGCGTGAGGTTGAGCTAATTAGTGTTGCAGTTCACCGGAATCTTTTAAGATTGATT
GGTTTCTGTACAACACAAACAGAGCGCCTACTTGTTTATCCTTTCATGCAAAATCTTAGT
GTGGCCTACCGTCTACGAGAATTTAAACCTGGGGAGCCAATATTAGACTGGTCCGCAAGG
AAGCGAGTGGCTATAGGCACAGCTCGTGGACTGGAGTATTTGCACGAGCACTGCAATCCT
AAGATTATACATCGTGACGTCAAGGCTGCCAATGTCTTGCTTGATGAAGGTTTTGAACCG
GTGGTTGGGGATTTCGGCCTGGCCAAGCTGGTGGACGTGCAGAAGACGTCCGTGACTACC
CAGGTCCGTGGAACCATGGGTCACATCGCCCCCGAATACCTGTCCACTGGGAAGTCCTCC
GAGAGAACCGATGTTTTTGGCTATGGCATAATGCTTCTTGAGCTAGTCACTGGTCAGCGT
GCCATCGACTTTTCACGTCTGGAGGAAGAAGATGACGTGTTGTTACTTGACCATGTCAAG
AAGCTGCAGAGGGAAGGGCATCTCGACGCCATCGTTGACCGCAACTTGAACAGCTGTTAC
AACGGGCAGGAGGTGGAGATGATGATCCAGATCGCGCTGCTCTGCACGCAGGCGTCGCCC
GAGGACCGCCCGTCCATGTCCGAGGTGGTCCGGATGCTGGAGGGCGAGGGCCTCGCCGAG
AGGTGGGAGGAGTGGCAGCAGGTGGAGGTGACGAGGAGGCAGGACTACGAGCGGATGCAG
CAGCGCTTCGACTGGGGCGAGGACTCCATCTACAACCAGGACGCGATCGAACTGTCCGCC
GGCAGGTGACGACGTCGGGTCGTCACACGGAGCTTGTCGTCGTCGACGTCGCAGTGCCGA
CATGTAACTGTATATGTAAGGCATTGTTGCGAAGCTTGTTAGCAAAATATAATCTGTGAC
ACTCACTTAGTGTTGATACGTGCCTGTATTTTATTATTTGTGTGTATAAGGAAGGATGAT
TTAAACGGGTTCAGGTGTTTACCGGTTGTCCGGCTCCCATCCTGTAAAGCTCTATATAGG
GGGGTGGGGACCGGTTGAAACCACATCACATGCAAGCTGCAAGAATTGGCTTGACAAATA
TTTAACGAACTCTATTGTCGACATAAAAAGTAAGTGAT