Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033624_T019
CDS Infomation

cds chromosome:B73_RefGen_v4:1:269069442:269072083:1 gene:Zm00001d033624 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase4 description: lipoxygenase4
Sequence

ATGTCGGACTTCCTCGGGTACTCACTGAAGGCGATCATCGAGGCTGTCCTTCCGACGCTG
GGGACGTTCGTCGACGATACGCCCAAGGAGTTCGATTCGTTCGAAGACATCCTTGGGCTC
TACGAGCCGGGTCCAGAGGCGCCCAACAACCCACTGGTAGCAGAGGTCAGGAAGAGAATC
CCCAGCGAGTTCCTCAGAAGCATTCTGCCCAATGGTAGCCATGACCACCCCCTGAAGATG
CCCCTTCCAAATATCATCAGATCAGATGTGTTGAAAAAGGCTCCAGAGTTTAAGTTTGGC
TGGAGGACCGACGAAGAGTTTGCGAGGGAGACGCTTGCAGGCGTGAACCCAGTGCTCATC
AAACGTCTGACGGAGTTCCCAGCTAAAAGTACCCTGGACCCAAGTCAATACGGAGACCAT
ACGAGCAAGATCACCGAAGCTCACATCCAGCATAACATGGAAGGCCTGTCAGTGCAGAAT
GCACTGAAGAAGAACAGGCTCTTCATCCTAGACCACCATGACCATTTCATGCCGTACCTC
AACAAGATCAACGAGTTGGAGGGGAACTTCATCTACGCCAGCAGGACCCTACTGTTCCTG
AAGGACGATGGCACGCTGAAGCCCCTGGCCGTCGAGCTGAGCCTGCCCCACCCTGATGGC
CAGCAGCACGGCGCGGTCAGCAAGGTGTACACCCCAGCTCACTCCGGCGCTGAGGGCCAC
GTCTGGCAACTTGCCAAGGCTTATGCCTGCGTGAACGACTCCGCCTGGCATCAGCTGATC
AGCCACTGGCTGAACACGCACGCGGTGATCGAGCCGTTCGTCATCGCAACGAACCGGCAG
CTGAGCGTGGTGCATCCAGTGCACAAGCTGCTGAGCCCACACTACCGTGACACGCTGAAC
ATCAACGCCCTGGCACGCCAGACGCTCATCAACGCCGACGGCATCTTCGAGCGCACCGTG
TTCCCTGCAAAGTACGCGCTGGGGATGTCCTCCGACGTGTACAAGAGCTGGAATTTCAAC
GAGCAGGCTCTCCCAGCAGACCTCGTCAAGAGAGGTGTGGCTGTGCCGGACCAGTCGAGC
CCCTACGGTGTCCGGTTGCTGATCAAGGACTACCCTTACGCCGTGGACGGGCTGGTCATC
TGGTGGGCGATCGAGCGGTGGGTCAAGGAGTACCTGGACGTCTACTACCCCAACGACGGC
GAGCTCCAGCGCGACGTGGAGCTGCAGGCGTGGTGGAAGGAGGTGCGCGAGGAGGCGCAC
GGCGACCTCAAGGACCGAGACTGGTGGCCCAGGATGGACGCCGTCCAGCGGCTGGCCAGG
GCGTGCACGACCGTCATCTGGGTAGCGTCCGCGCTGCACGCGGCCGTCAACTTCGGGCAG
TACCCGTACGCCGGGTACCTGCCGAACCGGCCGACCGTGAGCCGGCGGCCGATGCCGGAG
CCGGGCAGCGACGACTACAAGAAGCTGGAGGCGGGGCAGAAGGAGGCGGACGCGGTGTTC
ATCCGCACCATCACCAGCCAGTTCCAGACCATCCTGGGCATCTCGCTCATCGAGATCCTC
TCCAAGCACTCCTCCGACGAGGTGTACCTCGGCCAGCGCGACGAGCCTGAGCGCTGGACG
TCGGACGCCAGGGCGCTGGACGCGTTCAGAAGGTTCGGAAGCCGGCTGGTGGAGATCGAG
AAGCGGATCAGGACGATGAACGACAGCCCGACGTTGAAGAACCGGAAGGGGCCGGTGGAG
ATGCCGTACATGCTGCTGTACCCCAACACGTCGGATGTCACCGGCGAGAAGGGCGAGGGG
CTCACTGCCATGGGCATTCCCAACAGCATCTCCATATGA

Peptide Sequence

PEP ID

Zm00001d033624_P019
PEP Infomation

pep chromosome:B73_RefGen_v4:1:269069442:269072083:1 gene:Zm00001d033624 transcript:Zm00001d033624_T019 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase4 description: lipoxygenase4
Sequence

MSDFLGYSLKAIIEAVLPTLGTFVDDTPKEFDSFEDILGLYEPGPEAPNNPLVAEVRKRI
PSEFLRSILPNGSHDHPLKMPLPNIIRSDVLKKAPEFKFGWRTDEEFARETLAGVNPVLI
KRLTEFPAKSTLDPSQYGDHTSKITEAHIQHNMEGLSVQNALKKNRLFILDHHDHFMPYL
NKINELEGNFIYASRTLLFLKDDGTLKPLAVELSLPHPDGQQHGAVSKVYTPAHSGAEGH
VWQLAKAYACVNDSAWHQLISHWLNTHAVIEPFVIATNRQLSVVHPVHKLLSPHYRDTLN
INALARQTLINADGIFERTVFPAKYALGMSSDVYKSWNFNEQALPADLVKRGVAVPDQSS
PYGVRLLIKDYPYAVDGLVIWWAIERWVKEYLDVYYPNDGELQRDVELQAWWKEVREEAH
GDLKDRDWWPRMDAVQRLARACTTVIWVASALHAAVNFGQYPYAGYLPNRPTVSRRPMPE
PGSDDYKKLEAGQKEADAVFIRTITSQFQTILGISLIEILSKHSSDEVYLGQRDEPERWT
SDARALDAFRRFGSRLVEIEKRIRTMNDSPTLKNRKGPVEMPYMLLYPNTSDVTGEKGEG
LTAMGIPNSISI

Transcript Sequence

Transcript ID

Zm00001d033624_T019
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:269069442:269072083:1 gene:Zm00001d033624 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lipoxygenase4 description: lipoxygenase4
Sequence

GACCCCAACTCGGAGAGCAGGCTGTTTCTGCTGAACCTGAACATCTACGTCCCGCGCGAC
GAGCGGTTTGGGCATCTCAAGATGTCGGACTTCCTCGGGTACTCACTGAAGGCGATCATC
GAGGCTGTCCTTCCGACGCTGGGGACGTTCGTCGACGATACGCCCAAGGAGTTCGATTCG
TTCGAAGACATCCTTGGGCTCTACGAGCCGGGTCCAGAGGCGCCCAACAACCCACTGGTA
GCAGAGGTCAGGAAGAGAATCCCCAGCGAGTTCCTCAGAAGCATTCTGCCCAATGGTAGC
CATGACCACCCCCTGAAGATGCCCCTTCCAAATATCATCAGATCAGATGTGTTGAAAAAG
GCTCCAGAGTTTAAGTTTGGCTGGAGGACCGACGAAGAGTTTGCGAGGGAGACGCTTGCA
GGCGTGAACCCAGTGCTCATCAAACGTCTGACGGAGTTCCCAGCTAAAAGTACCCTGGAC
CCAAGTCAATACGGAGACCATACGAGCAAGATCACCGAAGCTCACATCCAGCATAACATG
GAAGGCCTGTCAGTGCAGAATGCACTGAAGAAGAACAGGCTCTTCATCCTAGACCACCAT
GACCATTTCATGCCGTACCTCAACAAGATCAACGAGTTGGAGGGGAACTTCATCTACGCC
AGCAGGACCCTACTGTTCCTGAAGGACGATGGCACGCTGAAGCCCCTGGCCGTCGAGCTG
AGCCTGCCCCACCCTGATGGCCAGCAGCACGGCGCGGTCAGCAAGGTGTACACCCCAGCT
CACTCCGGCGCTGAGGGCCACGTCTGGCAACTTGCCAAGGCTTATGCCTGCGTGAACGAC
TCCGCCTGGCATCAGCTGATCAGCCACTGGCTGAACACGCACGCGGTGATCGAGCCGTTC
GTCATCGCAACGAACCGGCAGCTGAGCGTGGTGCATCCAGTGCACAAGCTGCTGAGCCCA
CACTACCGTGACACGCTGAACATCAACGCCCTGGCACGCCAGACGCTCATCAACGCCGAC
GGCATCTTCGAGCGCACCGTGTTCCCTGCAAAGTACGCGCTGGGGATGTCCTCCGACGTG
TACAAGAGCTGGAATTTCAACGAGCAGGCTCTCCCAGCAGACCTCGTCAAGAGAGGTGTG
GCTGTGCCGGACCAGTCGAGCCCCTACGGTGTCCGGTTGCTGATCAAGGACTACCCTTAC
GCCGTGGACGGGCTGGTCATCTGGTGGGCGATCGAGCGGTGGGTCAAGGAGTACCTGGAC
GTCTACTACCCCAACGACGGCGAGCTCCAGCGCGACGTGGAGCTGCAGGCGTGGTGGAAG
GAGGTGCGCGAGGAGGCGCACGGCGACCTCAAGGACCGAGACTGGTGGCCCAGGATGGAC
GCCGTCCAGCGGCTGGCCAGGGCGTGCACGACCGTCATCTGGGTAGCGTCCGCGCTGCAC
GCGGCCGTCAACTTCGGGCAGTACCCGTACGCCGGGTACCTGCCGAACCGGCCGACCGTG
AGCCGGCGGCCGATGCCGGAGCCGGGCAGCGACGACTACAAGAAGCTGGAGGCGGGGCAG
AAGGAGGCGGACGCGGTGTTCATCCGCACCATCACCAGCCAGTTCCAGACCATCCTGGGC
ATCTCGCTCATCGAGATCCTCTCCAAGCACTCCTCCGACGAGGTGTACCTCGGCCAGCGC
GACGAGCCTGAGCGCTGGACGTCGGACGCCAGGGCGCTGGACGCGTTCAGAAGGTTCGGA
AGCCGGCTGGTGGAGATCGAGAAGCGGATCAGGACGATGAACGACAGCCCGACGTTGAAG
AACCGGAAGGGGCCGGTGGAGATGCCGTACATGCTGCTGTACCCCAACACGTCGGATGTC
ACCGGCGAGAAGGGCGAGGGGCTCACTGCCATGGGCATTCCCAACAGCATCTCCATATGA
GCCTCCTCACTGCCTGAGCGGATGGTTTGTAGATGTTCTGTTACGCTGTGTGTAATGTGT
CGTTTATTCGTTGGTTTTGTCAGTCTCAGGGTAGGGAATGGAGATGTTGATTGGATCCAT
GATCTGTAGGGTTGAGAGAGGAGTCACGTCTGGAGAATGTTGTCAATGTGTGTTTCTTTC
TTGTTAAGAATAAAAGTTCGTCAGCTCATTT