Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033611_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:1:268584176:268588402:-1 gene:Zm00001d033611 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline phytoceramidase (aPHC)
Sequence	ATGGCAGATTCAATGGTAGCAAGCTTCTGGGGGCCTGTGACATCAACGACTGAGTTGTGC GAGGAGAATTATGCACACTCGTCATATATCGCAGAATTCTACAATACCATCTCTAATGTC CCATGCGTTCTTTTGGCACTTATTGGATTAGTGAATGCTTTCTGCCAAGGTTTTGAGAAA CGATTTAGTGTCCTGCACATATCCAATATGATACTTGCTATTGGGAGTATGATTTTCCAT GCCACCTTGCAACTTCTCCTACAACAGAGTGATGAGACTCCTATGGTTTGGGAGATCCTT CTCTACATGTATGTCCTCTATTCACCGGACTGGCACTACAGGAGCACAATGCCAACTTTC CTGTTCCTGTATGGTGCTGCCTTTGCCGTAGTACATTTCTTTGCCCGGTTCCAAGTCGTA TTCAAGCTGCATTACGTTGGCCTCTGCTTGCTCTGCATCCCCCGGATGTACAAGTACTAC ATACAGACGAAAGACGTGGGTGCGAAGCGGCTCGCAAAACTGTGGGTCCTTACACTGACC CTTGGGACCCTCTGCTGGCTGGTTGATCGCGTCTTCTGCAAGAAGCTTTCGCATTGGTAC GTCAACCCGCAGGGGCACGCGTGGTGGCACGTGCTTATGGGCCTCAACTCGTACTATGCA AACACGTTCCTGATGTTCTGCCGGGCTCAGCAGCGCGGGTGGGAGCCGCGGATCACGCAC CTCCTTGGATTCTTGCCGTATGTCAAGGTCCAGAAACCAGAGAAGAGGGAATGA

Peptide Sequence

PEP ID	Zm00001d033611_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:1:268584176:268588402:-1 gene:Zm00001d033611 transcript:Zm00001d033611_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline phytoceramidase (aPHC)
Sequence	MADSMVASFWGPVTSTTELCEENYAHSSYIAEFYNTISNVPCVLLALIGLVNAFCQGFEK RFSVLHISNMILAIGSMIFHATLQLLLQQSDETPMVWEILLYMYVLYSPDWHYRSTMPTF LFLYGAAFAVVHFFARFQVVFKLHYVGLCLLCIPRMYKYYIQTKDVGAKRLAKLWVLTLT LGTLCWLVDRVFCKKLSHWYVNPQGHAWWHVLMGLNSYYANTFLMFCRAQQRGWEPRITH LLGFLPYVKVQKPEKRE

Transcript Sequence

Transcript ID	Zm00001d033611_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:268584176:268588402:-1 gene:Zm00001d033611 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline phytoceramidase (aPHC)
Sequence	CTCGGCAGGACCTGTGGCTGTGATGGGCCTTAAACTTTGTGCAGCCCACGTCACTTTGAC ATAGCTATCGTTGGATCAACAGCGGATGGGGTAGATTAGCTGACTGCTCTGTTGCGTCAT CGAGGTGGAAGTTAGAGATCTGATTCCGCCCCACAGCATACCTCTCACGGTCTCCGTTCC CCTGCCGACGAGTGGGCGGCCGCTGCCGCCGGCTTACGGAAGGTTATTTCTTTGGCGCAC TCATGATTTAGCACCAGCCAAATTGACCTTTAACTCTGGTGACATAAGCTGTTGCTAGGG TAGCAAATCAAGAGCTAAGAATGGCAGATTCAATGGTAGCAAGCTTCTGGGGGCCTGTGA CATCAACGACTGAGTTGTGCGAGGAGAATTATGCACACTCGTCATATATCGCAGAATTCT ACAATACCATCTCTAATGTCCCATGCGTTCTTTTGGCACTTATTGGATTAGTGAATGCTT TCTGCCAAGGTTTTGAGAAACGATTTAGTGTCCTGCACATATCCAATATGATACTTGCTA TTGGGAGTATGATTTTCCATGCCACCTTGCAACTTCTCCTACAACAGAGTGATGAGACTC CTATGGTTTGGGAGATCCTTCTCTACATGTATGTCCTCTATTCACCGGACTGGCACTACA GGAGCACAATGCCAACTTTCCTGTTCCTGTATGGTGCTGCCTTTGCCGTAGTACATTTCT TTGCCCGGTTCCAAGTCGTATTCAAGCTGCATTACGTTGGCCTCTGCTTGCTCTGCATCC CCCGGATGTACAAGTACTACATACAGACGAAAGACGTGGGTGCGAAGCGGCTCGCAAAAC TGTGGGTCCTTACACTGACCCTTGGGACCCTCTGCTGGCTGGTTGATCGCGTCTTCTGCA AGAAGCTTTCGCATTGGTACGTCAACCCGCAGGGGCACGCGTGGTGGCACGTGCTTATGG GCCTCAACTCGTACTATGCAAACACGTTCCTGATGTTCTGCCGGGCTCAGCAGCGCGGGT GGGAGCCGCGGATCACGCACCTCCTTGGATTCTTGCCGTATGTCAAGGTCCAGAAACCAG AGAAGAGGGAATGATTTCTGTCTCTGCTTGAAAACTGATGATATTCAGTCGGCCACCAGT AAGCTAATGCCCCCAATGTGTGCTCAGACAAGTCCGTGGCACTCTTGTATATGGGCGCCC AAATGATTACGGACTTCAAATGTTCTGATGTCGCATTAGATTTTGTATCATACTTAAATC ATCGAACAGAGATTGTCCTAGTTTTGGCCACCTTTCTTTTGGTTTCTTCGCAATTACCGT TTGGTGGTAAATTAGGACTGAGTTATTTATTTATTTGTTTGTCGTTGAATGGAGTCCAGT TGTACTAGTTACCACTGCACAAGAAGATACATTCATCCACATGATGACATGT