Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033597_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:1:268079027:268105830:-1 gene:Zm00001d033597 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloride channel protein CLC-d
Sequence	ATGTGGAGAGTATTCTTCACATCTGCCGTGGTGGCCGTTGTGGTGCGTTCAGCCATGAAT TGGTGCAACAGTGGAAAATGCGGTCATTTTGGAGCTGGAGGTTTTATAATATGGGACATA TCTGGAGGTCAAGAAGATTACTCATACCAGGAATTGTTTCCTATGGCAATTATTGGTGTT ATCGGTGGACTTCTTGGGGCATTATTTAATCAACTCACCCTCTATATAACTAAATGGCGG CGAACGTGTCTTCATAAGAAAGGGAAACGAGTCCAAATCTTTGAAGCCTGTCTTATATCT TTGGTAACATCCACGATTTCCTTTGTGTTGCCACTACTGAGGAAATGCAGCCCATGCCCT AAGTTAGAAACTAATTCTGGCATAGAATGCCCTCATCCACCTGGCACAGATGGGAATTTT GTTAACTTCTATTGTTCACAAGATAGAGAGTACAATGATTTAGCAACCATTTTCTTCAAT ACTCAGGATGATGCAATACGTAATCTTTTCAGTGCAAAAACATTTCATGAATACAGTGCA CAAAGCCTGATCACTTTCCTGGTCATGTTTTATTTCTTGGCTGTTGTGACATTTGGAACT GCAGTTCCGGCTGGCCAGTTCGTTCCCGGAATAATGATTGGATCTACATATGGAAGGCTT GTTGGAATGTTTGTTGTCAAGTTCTATAAGAAACTAAACATTGAGGAGGGCACGTATGCA CTCCTTGGTGCTGCATCGTTTCTTGGAGGTTCAATGAGAATGACTGTATCTTTATGTGTT ATCATGGTTGAGATTACAAACAACTTGAAACTCTTGCCATTGATCATGCTTGTTCTTCTG GTTTCTAAGGCGGTTGGTGACTTTTTTAATGAAGGGTTATATGAAGAGCAAGCCCGATTA AGGGGCATCCCTTTACTGGATTCCAGGCCTAAGCAAGTCATGAGAAATATGAATGCAAGG GATGCGTGCAAGAATCAAAAGGTTGTCTGCCTACCACGTGTTTCAAGGGTTGTTGATATC ATTTCTGTTTTGCGAACTAACAAGCATAATGGTTTCCCTGTTGTTGACCGTGGGCAGAAT GGCGAGTCACTTGTCATAGGTCTCATACTTCGTAGCCACTTATTGGTACTTCTACAAGCT AAAGTAGATTTCCAGAACAGTGCTTTCCCCTGTGGGCCAGGCGTACTGAACAGGCACAAT TTTAGTGACTTTGTTAAACCAGCATCAAGTAAAGGAAAGTCAATTGATGATATTCATTTG ACAGAGGATGAACTGGGGTTGTATTTGGATCTTGCCCCATTTTTAAATCCTTCACCATAC ATAGTGCCAGAGGACATGTCGTTGGCGAAGGTGTACAATCTCTTCCGTCAACTTGGATTG AGACATATATTTGTTGTTCCTAGGCCTTCTCGTGTTGTAGGATTGATAACCAGAAAAGAT TTATTACTTGAGGAGGATAACAACAATGTGATGCCGGAGCTCCAATCGACGAGTGGGCTT GCTGAACGGCAAAATGCTCGGGGGTAA

Peptide Sequence

PEP ID	Zm00001d033597_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:1:268079027:268105830:-1 gene:Zm00001d033597 transcript:Zm00001d033597_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloride channel protein CLC-d
Sequence	MWRVFFTSAVVAVVVRSAMNWCNSGKCGHFGAGGFIIWDISGGQEDYSYQELFPMAIIGV IGGLLGALFNQLTLYITKWRRTCLHKKGKRVQIFEACLISLVTSTISFVLPLLRKCSPCP KLETNSGIECPHPPGTDGNFVNFYCSQDREYNDLATIFFNTQDDAIRNLFSAKTFHEYSA QSLITFLVMFYFLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKFYKKLNIEEGTYA LLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLVSKAVGDFFNEGLYEEQARL RGIPLLDSRPKQVMRNMNARDACKNQKVVCLPRVSRVVDIISVLRTNKHNGFPVVDRGQN GESLVIGLILRSHLLVLLQAKVDFQNSAFPCGPGVLNRHNFSDFVKPASSKGKSIDDIHL TEDELGLYLDLAPFLNPSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPRPSRVVGLITRKD LLLEEDNNNVMPELQSTSGLAERQNARG

Transcript Sequence

Transcript ID	Zm00001d033597_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:268079027:268105830:-1 gene:Zm00001d033597 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chloride channel protein CLC-d
Sequence	ACGGGACCAACTTGACGAACTCTTGGTTCTCAAGCTTTCCCGGCCAGTCTCGCAGCAACC CTTTCCCTACCCCGATCGAGCGTGCGTCAAGGTCGGGATCCGGCGCCGCCGCATCCCGAT CCGATGCTCTCCGGCGTCGACCACGACGTTCCCGACGGCATCGGGATGGCGCGGCTCGCG TGGACGCGCCTCCCCACCGCCGACGGGGAGGGGGCGGGCCCCTCCACTTCCGAGGCCGCG GACGACGAACTCTTATCGGGCGCTGCCATAGAGAGCCTCGACTACGAGGTCATCGAGAAC TACGCGTACCGGGAGGAGCAGGCGCAGCGGAGCAAGTTCTGGGTGCCCTACTACGTCATG CTCAAGTGGCTGTTCGCTCTGCTGATCGGCGTTGGTACTGGATTAGCTGCTATATTCATA AACCTGGCTGTTGAGAACTTCTCTGGATGGAAATATACTGCGACATTTGCTATAATAAAG CACTCGTATTTTGTGGGATTCTTTGTGTACACAGTTTTCAATTTAGCCCTGGTCTTCTCT TCTGTATATATAGTCACAAACTTTGCTCCAGCAGCTGCTGGATCTGGTATTCCAGAGATC AAAGGTTACTTAAATGGAGTGGATACACATGGAATCCTCCTTTTCAGGACATTAGTTGGG AAGATCTTTGGGAGCATTGGATCAGTTGGAGGTGGATTGGCTCTAGGGAAAGAAGGGCCT CTTGTTCATACTGGGGCCTGCATTGCTTCGCTTCTTGGACAAGGTGGATCTGCAAAGTAC CACTTGAGTTCTAGGTGGGTACGGATTTTTGAAAGCGATCGTGATAGGCGAGACCTTCTG GAGTTGCTGCTGCCTTCAGAGCTCCTGTTGGTGGGGTACTATTTGCCTTGGAGGAAGTTA CTTCCTGGTGGAGAAGTCATCTTATGTGGAGAGTATTCTTCACATCTGCCGTGGTGGCCG TTGTGGTGCGTTCAGCCATGAATTGGTGCAACAGTGGAAAATGCGGTCATTTTGGAGCTG GAGGTTTTATAATATGGGACATATCTGGAGGTCAAGAAGATTACTCATACCAGGAATTGT TTCCTATGGCAATTATTGGTGTTATCGGTGGACTTCTTGGGGCATTATTTAATCAACTCA CCCTCTATATAACTAAATGGCGGCGAACGTGTCTTCATAAGAAAGGGAAACGAGTCCAAA TCTTTGAAGCCTGTCTTATATCTTTGGTAACATCCACGATTTCCTTTGTGTTGCCACTAC TGAGGAAATGCAGCCCATGCCCTAAGTTAGAAACTAATTCTGGCATAGAATGCCCTCATC CACCTGGCACAGATGGGAATTTTGTTAACTTCTATTGTTCACAAGATAGAGAGTACAATG ATTTAGCAACCATTTTCTTCAATACTCAGGATGATGCAATACGTAATCTTTTCAGTGCAA AAACATTTCATGAATACAGTGCACAAAGCCTGATCACTTTCCTGGTCATGTTTTATTTCT TGGCTGTTGTGACATTTGGAACTGCAGTTCCGGCTGGCCAGTTCGTTCCCGGAATAATGA TTGGATCTACATATGGAAGGCTTGTTGGAATGTTTGTTGTCAAGTTCTATAAGAAACTAA ACATTGAGGAGGGCACGTATGCACTCCTTGGTGCTGCATCGTTTCTTGGAGGTTCAATGA GAATGACTGTATCTTTATGTGTTATCATGGTTGAGATTACAAACAACTTGAAACTCTTGC CATTGATCATGCTTGTTCTTCTGGTTTCTAAGGCGGTTGGTGACTTTTTTAATGAAGGGT TATATGAAGAGCAAGCCCGATTAAGGGGCATCCCTTTACTGGATTCCAGGCCTAAGCAAG TCATGAGAAATATGAATGCAAGGGATGCGTGCAAGAATCAAAAGGTTGTCTGCCTACCAC GTGTTTCAAGGGTTGTTGATATCATTTCTGTTTTGCGAACTAACAAGCATAATGGTTTCC CTGTTGTTGACCGTGGGCAGAATGGCGAGTCACTTGTCATAGGTCTCATACTTCGTAGCC ACTTATTGGTACTTCTACAAGCTAAAGTAGATTTCCAGAACAGTGCTTTCCCCTGTGGGC CAGGCGTACTGAACAGGCACAATTTTAGTGACTTTGTTAAACCAGCATCAAGTAAAGGAA AGTCAATTGATGATATTCATTTGACAGAGGATGAACTGGGGTTGTATTTGGATCTTGCCC CATTTTTAAATCCTTCACCATACATAGTGCCAGAGGACATGTCGTTGGCGAAGGTGTACA ATCTCTTCCGTCAACTTGGATTGAGACATATATTTGTTGTTCCTAGGCCTTCTCGTGTTG TAGGATTGATAACCAGAAAAGATTTATTACTTGAGGAGGATAACAACAATGTGATGCCGG AGCTCCAATCGACGAGTGGGCTTGCTGAACGGCAAAATGCTCGGGGGTAATATACATCTG GAACGTCCTCTTCTTGACAACCTAGTTATTGAATAGACACGTAGCAGCATGTATGTCAAA ATAATTTTGATAGCTAGCAGTTAACCTTGCACTGCATGTTGGGACATGGCCCATGGGTAT TATACTTCACATGAATGATGAAGCAGCAGTGAGCGGATAATGCAGCATGGTTTTGGATT