Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033596_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:268074541:268077881:-1 gene:Zm00001d033596 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type

Sequence

ATGGAGTGCGTATTGGGCGTGGTTGGCCGCGACTTCGCGCTGGTGGCGGCCGACACCTCC
GCCGTGCAGAGTATTCTCGTCCACAAGACCGACGAGGACAAGGTGATGGTGCTCGACTCG
CAAAAGCTGATGGGCGCTTCAGGGGAGCCTGGTGATCGGGTGCAATTTACGGAGTTCATA
CAGAAGAACCTCCACCTGTACCAGTTCCGGAACACCATCCCGCTCTCAACCGCCGCCGCC
GCCAACTTCACACGCGGCGAACTCGCCACAGCCCTTCGCAAGAATCCATATATGGTCAAT
ATTATTCTTGGTGGTTATGATAAGGATGTTGGTGCTTCCCTCTACTACATCGACTACATT
GCAACCTTGCACAAAATTGACAAAGGTGCTTTTGGGTACGGATCATACTTCTGTTTGTCT
CTTATGGACAAGTTGTACCACCCGGACATGACTGTTGAGGAAGCAGTAGATCTTGTTGAC
AAGTGCATCAAGGAGATTCGGCTGCGATTGGTTGTCGCGCCTCAGAACTTTGTTATCAAG
ATTGTTGACAAGGACGGGGCGAGGGAGTACGCCAGGCGTGAACTCGTCGGTGACAATGCA
CCTGCTGAAGCTGCAACCGCAGTTGTTGCTGCCTGA

Peptide Sequence

PEP ID

Zm00001d033596_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:268074541:268077881:-1 gene:Zm00001d033596 transcript:Zm00001d033596_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type

Sequence

MECVLGVVGRDFALVAADTSAVQSILVHKTDEDKVMVLDSQKLMGASGEPGDRVQFTEFI
QKNLHLYQFRNTIPLSTAAAANFTRGELATALRKNPYMVNIILGGYDKDVGASLYYIDYI
ATLHKIDKGAFGYGSYFCLSLMDKLYHPDMTVEEAVDLVDKCIKEIRLRLVVAPQNFVIK
IVDKDGAREYARRELVGDNAPAEAATAVVAA

Transcript Sequence

Transcript ID

Zm00001d033596_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:268074541:268077881:-1 gene:Zm00001d033596 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit beta type

Sequence

GCTAGTAGTAGTAGCAATTGGAGCAAAAGAAGGCCCAACCAGCACGTCACACTGCTGCGA
AGGACACCAGGCCCGCCGAAAATTGTGTGAACGCCCCTTTCTTCTACCCCAAGACGAACT
CGGTGAACTCTTTCCGGTTCGTTCCCCTACGCCCGTTTCTCTCTCGTCGCGCAACATCAG
AGCACAAGCGAGGAACCCAGTCCAGTCCCGGGAATGGAGTGCGTATTGGGCGTGGTTGGC
CGCGACTTCGCGCTGGTGGCGGCCGACACCTCCGCCGTGCAGAGTATTCTCGTCCACAAG
ACCGACGAGGACAAGGTGATGGTGCTCGACTCGCAAAAGCTGATGGGCGCTTCAGGGGAG
CCTGGTGATCGGGTGCAATTTACGGAGTTCATACAGAAGAACCTCCACCTGTACCAGTTC
CGGAACACCATCCCGCTCTCAACCGCCGCCGCCGCCAACTTCACACGCGGCGAACTCGCC
ACAGCCCTTCGCAAGAATCCATATATGGTCAATATTATTCTTGGTGGTTATGATAAGGAT
GTTGGTGCTTCCCTCTACTACATCGACTACATTGCAACCTTGCACAAAATTGACAAAGGT
GCTTTTGGGTACGGATCATACTTCTGTTTGTCTCTTATGGACAAGTTGTACCACCCGGAC
ATGACTGTTGAGGAAGCAGTAGATCTTGTTGACAAGTGCATCAAGGAGATTCGGCTGCGA
TTGGTTGTCGCGCCTCAGAACTTTGTTATCAAGATTGTTGACAAGGACGGGGCGAGGGAG
TACGCCAGGCGTGAACTCGTCGGTGACAATGCACCTGCTGAAGCTGCAACCGCAGTTGTT
GCTGCCTGAGGCATGAACTCGTTTGAGGTTGGAATGTGTTAGTTGTTTCTCAGCGATGCT
ACTTATGCGATCACAGGATACTGGTGGGGGGCCCACAACTGTTTTATCAATTTTAGCCCA
GTCGTGTAATTCTGTTTCTGCACTATTCATGTCTGCTGAGTACAAGTAGTGTTTCACGCT
TGAACAAATACAATACTGTTGCTGTGCACCTTTTCTGATCACTGAAATGGCCGGCGACCC
AGGCCGTTACAAGCAGGCCATGGCCCGTTACTAGGTAGTCTATTTTCTTTGCCAAACTCG
CTTATCTTTATCTGTCTGCTCATATAATCAACGTTTTTGCGCTTTTTC