Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033556_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:1:267105874:267108685:1 gene:Zm00001d033556 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonate 4-alpha-galacturonosyltransferase
Sequence	ATGAAATTAAGGAGAGTTGCTGTAAGGAAGAAAATGGAAGTAGTGCAGCAGGATGATGAA GCGTTAGTTAAACTTGAGAATGCAGGTATCGAACGTTCAAAAGCTGTTGACTCTGCTGTG CTGGGAAAATACAGCATCTGGAGACGTGAAAATGAAAATGAAAAGGCAGATTCAAGGGTC CGTTTGATGCGAGATCAAATGATCATGGCCAGAATATATTCTGTTCTTGCCAAATCGAGG GACAAGCTTGATCTCTATCAGGAGCTGCTTGCAAGGCTCAAGGAAAGCCAGCGCTCCCTT GGGGAAGCTACTGCTGATGCTGAACTTCCCAAGAGTGCTTCGGATAGAACCAAAGCAATG GGCCAAGTTTTATCAAAAGCAAGGGATCTATTGTACGATTGCAAGGAAATTACCCAGCGT TTGAGAGCAATGCTTCAGTCAGCAGATGAGCAGGTCCGGAGCTTGAAGAAGCAGAGCACC TTCCTTAGCCAGCTAGCAGCTAAGACAATCCCAAATGGCATCCATTGTCTTTCCATGCGC TTAACGATTGATTATTATCTTCTCTCTCCAGAGAAAAGAAAGTTCCCCAATAGTGAGAAC CTGGAAAATCCTGATCTTTACCATTATGCTCTTTTCTCGGACAATGTTTTGGCAGCATCA GTTGTGGTCAACTCAACCATCATGAATGCTAAGGAGCCTGAAAAACATGTATTTCATCTT GTTACTGACAAACTGAACTTTGGGGCCATGAACATGTGGTTTTTGCTGAATCCACCTGGG GATGCAACAATCCATGTGGAAAATGTTGATGACTTCAAATGGTTAAACTCTTCTTACTGC CCTGTTCTGAAGCAGCTTGAGTCTGCAGCCATGAAAGAATATTATTTCAAGGCTGATCGT CCGAAAACACTCTCTGCTGGTTCTTCTAATCTGAAGTATCGAAACCCAAAATATTTGTCC ATGCTCAATCATCTAAGATTTTACCTCCCACAAGTCTATCCCAAGCTGAATAAAATTCTT TTCCTGGATGATGATATAGTTGTCCAGAGGGACCTAACTGGACTCTGGGAGGTTGATCTT AATGGAAATGTAAATGGAGCCGTGGAAACATGTGGAGAGAGTTTTCACCGATTTGATAAG TACCTAAATTTCTCAAACCCAAATATTGCTCAGAATTTTGATCCTAATGCATGTGGTTGG GCTTATGGAATGAACATGTTTGATCTGGAAGAATGGAAGAAGAAAGACATTACTGGAATT TACCACAAATGGCAGAACATGAACGAGAACAGGCTGCTCTGGAAACTGGGGACATTGCCA CCAGGGCTTCTAACTTTTTACAAGCTGACACACCCTCTGGACAAATCATGGCATGTGCTT GGCTTAGGGTACAATCCAACCATTGAGCGCTCAGAGATAGACAATGCTGCTGTCATCCAC TACAATGGTAACATGAAGCCCTGGCTGGAAATTGCAATGATAAAGTATCGGCCTTACTGG ACAAAGTACATCAATTATCAGCATTCCTACATTCATGGATGCAAGATCAGCCAATAG

Peptide Sequence

PEP ID	Zm00001d033556_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:1:267105874:267108685:1 gene:Zm00001d033556 transcript:Zm00001d033556_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonate 4-alpha-galacturonosyltransferase
Sequence	MKLRRVAVRKKMEVVQQDDEALVKLENAGIERSKAVDSAVLGKYSIWRRENENEKADSRV RLMRDQMIMARIYSVLAKSRDKLDLYQELLARLKESQRSLGEATADAELPKSASDRTKAM GQVLSKARDLLYDCKEITQRLRAMLQSADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMR LTIDYYLLSPEKRKFPNSENLENPDLYHYALFSDNVLAASVVVNSTIMNAKEPEKHVFHL VTDKLNFGAMNMWFLLNPPGDATIHVENVDDFKWLNSSYCPVLKQLESAAMKEYYFKADR PKTLSAGSSNLKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQRDLTGLWEVDL NGNVNGAVETCGESFHRFDKYLNFSNPNIAQNFDPNACGWAYGMNMFDLEEWKKKDITGI YHKWQNMNENRLLWKLGTLPPGLLTFYKLTHPLDKSWHVLGLGYNPTIERSEIDNAAVIH YNGNMKPWLEIAMIKYRPYWTKYINYQHSYIHGCKISQ

Transcript Sequence

Transcript ID	Zm00001d033556_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:267105874:267108685:1 gene:Zm00001d033556 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonate 4-alpha-galacturonosyltransferase
Sequence	CTGGACTGGGCAACCCAACTTTGACCTGCAGAATGTCTCATCGGGTCGAAAGGATGGCCC TCATCTCCTGGGTAGATCAAAGGAAATAACACACATGAAATTAAGGAGAGTTGCTGTAAG GAAGAAAATGGAAGTAGTGCAGCAGGATGATGAAGCGTTAGTTAAACTTGAGAATGCAGG TATCGAACGTTCAAAAGCTGTTGACTCTGCTGTGCTGGGAAAATACAGCATCTGGAGACG TGAAAATGAAAATGAAAAGGCAGATTCAAGGGTCCGTTTGATGCGAGATCAAATGATCAT GGCCAGAATATATTCTGTTCTTGCCAAATCGAGGGACAAGCTTGATCTCTATCAGGAGCT GCTTGCAAGGCTCAAGGAAAGCCAGCGCTCCCTTGGGGAAGCTACTGCTGATGCTGAACT TCCCAAGAGTGCTTCGGATAGAACCAAAGCAATGGGCCAAGTTTTATCAAAAGCAAGGGA TCTATTGTACGATTGCAAGGAAATTACCCAGCGTTTGAGAGCAATGCTTCAGTCAGCAGA TGAGCAGGTCCGGAGCTTGAAGAAGCAGAGCACCTTCCTTAGCCAGCTAGCAGCTAAGAC AATCCCAAATGGCATCCATTGTCTTTCCATGCGCTTAACGATTGATTATTATCTTCTCTC TCCAGAGAAAAGAAAGTTCCCCAATAGTGAGAACCTGGAAAATCCTGATCTTTACCATTA TGCTCTTTTCTCGGACAATGTTTTGGCAGCATCAGTTGTGGTCAACTCAACCATCATGAA TGCTAAGGAGCCTGAAAAACATGTATTTCATCTTGTTACTGACAAACTGAACTTTGGGGC CATGAACATGTGGTTTTTGCTGAATCCACCTGGGGATGCAACAATCCATGTGGAAAATGT TGATGACTTCAAATGGTTAAACTCTTCTTACTGCCCTGTTCTGAAGCAGCTTGAGTCTGC AGCCATGAAAGAATATTATTTCAAGGCTGATCGTCCGAAAACACTCTCTGCTGGTTCTTC TAATCTGAAGTATCGAAACCCAAAATATTTGTCCATGCTCAATCATCTAAGATTTTACCT CCCACAAGTCTATCCCAAGCTGAATAAAATTCTTTTCCTGGATGATGATATAGTTGTCCA GAGGGACCTAACTGGACTCTGGGAGGTTGATCTTAATGGAAATGTAAATGGAGCCGTGGA AACATGTGGAGAGAGTTTTCACCGATTTGATAAGTACCTAAATTTCTCAAACCCAAATAT TGCTCAGAATTTTGATCCTAATGCATGTGGTTGGGCTTATGGAATGAACATGTTTGATCT GGAAGAATGGAAGAAGAAAGACATTACTGGAATTTACCACAAATGGCAGAACATGAACGA GAACAGGCTGCTCTGGAAACTGGGGACATTGCCACCAGGGCTTCTAACTTTTTACAAGCT GACACACCCTCTGGACAAATCATGGCATGTGCTTGGCTTAGGGTACAATCCAACCATTGA GCGCTCAGAGATAGACAATGCTGCTGTCATCCACTACAATGGTAACATGAAGCCCTGGCT GGAAATTGCAATGATAAAGTATCGGCCTTACTGGACAAAGTACATCAATTATCAGCATTC CTACATTCATGGATGCAAGATCAGCCAATAGAAACCACCCTCAGATATTCTTCTGTGATG AACATTGAAGTTGGATGGGACTCAAAATGAAATCAGTATAACTATCACATGTTCTTTATT CGTGTTATATTAGATTTGTTAGTTATCACGTGTATGTAGTTTCGTCGCCCTTCTCATTGT TGGTTCTTGTCCCTTTTTGTCATGAAAAGAATGATGAGCTCTATGATTCTCATCAGCTGA TAAATGTAATGTCTGAATTTCTGT