Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033541_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:1:266462661:266473003:-1 gene:Zm00001d033541 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA/rRNA methyltransferase (SpoU) family protein
Sequence	ATGGGCGCCAAGCCCACGAGCCGAAGTTATCAAACGCAGCACTCGCCAGTCGCCACCCCG ATGCTACTGGTGCGCGCCCCGCCGTCTCCCGCGCCGCTCTCGGCGGCGGCCAATTTCCCG GCTGATCTGGAGCGCCCCCTTCGCCTTCGCGGTCTGTCCTCTTCCCGTGCCGGCGTTACT ACGGCCACTGCCACGGCGAAGCCGGCGGCTTCCTCCCTGGGCGGGCAAAAGCGCAAGCAG GTGACGAGCGTGGCGAACCCGCTGGTGAAGCACTGCGTCAAGCTCCGGCTCTCCGCCGCG TACCGACGCTCCTGCCGCCGCCTCCTCCTCGTCGGCCTCGCGCCTATCCTGGAGGTGTGT AGTTTTGAGCTCGAAGCCATCGATTACTTGCTTCTCCTGGACGGCGTAGAGGCCCCAGAG GCGCTGCGCGAGTTCTCTGGTGATATATTGTATGTCAGCGCCGCGGTGATGAAGAAGGTG TCCGGGATGCAGTCGGTTGATTCCACCGAGGCGGTTGCTGTCATGCACATGCCTAACCAT TTCCGCGATCTCGGGAGCCATCAGGATGGGGATGCTCTTGATGGTTTGTTCAGTTATCCA AAGAGGATTCTAGTCCTTGATGGGATTCAGGATCCTGGCAACCTTGGAACACTGATAAGA TCAGCTTGTGCATTCAAATGGGATGGAGTATTCCTTCTTCCGGCTTGTTGTGATCCTTTC AATGAAAAGGCTATTCGAGCAGCTCGTGGAGCCTCTTTGCAGCTTCCTATTGTCTCTGGT ACGTGGCATGACCTGCATGCATTGGTGACAAAGTATCGTATGAAGATGATGGCAGGGCAT CCAGAAAGTAGCAGTGATGCATCCAAAGAAACCTACTCGCTGTCCAACGAACTAGCTGAT TCACTGTTGAATGAGTCTCTGTGCTTAGTGTTAGGAAGTGAGGGCAATGGTCTCTCTGCA GAGACCCTCCAGGCATGTGAGCTTGTAAACATTCCAATGGAAGGTACTTTTGAATCTCTG AATGTTTCAGTTGCAGGTGGTATATTTTTGTTCATGTTACAACCCAAAGGTCAAATAGAC AGAACTTCAACCCCTTAG

Peptide Sequence

PEP ID	Zm00001d033541_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:1:266462661:266473003:-1 gene:Zm00001d033541 transcript:Zm00001d033541_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA/rRNA methyltransferase (SpoU) family protein
Sequence	MGAKPTSRSYQTQHSPVATPMLLVRAPPSPAPLSAAANFPADLERPLRLRGLSSSRAGVT TATATAKPAASSLGGQKRKQVTSVANPLVKHCVKLRLSAAYRRSCRRLLLVGLAPILEVC SFELEAIDYLLLLDGVEAPEALREFSGDILYVSAAVMKKVSGMQSVDSTEAVAVMHMPNH FRDLGSHQDGDALDGLFSYPKRILVLDGIQDPGNLGTLIRSACAFKWDGVFLLPACCDPF NEKAIRAARGASLQLPIVSGTWHDLHALVTKYRMKMMAGHPESSSDASKETYSLSNELAD SLLNESLCLVLGSEGNGLSAETLQACELVNIPMEGTFESLNVSVAGGIFLFMLQPKGQID RTSTP

Transcript Sequence

Transcript ID	Zm00001d033541_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:266462661:266473003:-1 gene:Zm00001d033541 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA/rRNA methyltransferase (SpoU) family protein
Sequence	GGATGGAATAATTTCAAGAGCCCACGCAGGCCGTTGAGTGCAATCTGTTCGGAGCAGATA AGATGGGCGCCAAGCCCACGAGCCGAAGTTATCAAACGCAGCACTCGCCAGTCGCCACCC CGATGCTACTGGTGCGCGCCCCGCCGTCTCCCGCGCCGCTCTCGGCGGCGGCCAATTTCC CGGCTGATCTGGAGCGCCCCCTTCGCCTTCGCGGTCTGTCCTCTTCCCGTGCCGGCGTTA CTACGGCCACTGCCACGGCGAAGCCGGCGGCTTCCTCCCTGGGCGGGCAAAAGCGCAAGC AGGTGACGAGCGTGGCGAACCCGCTGGTGAAGCACTGCGTCAAGCTCCGGCTCTCCGCCG CGTACCGACGCTCCTGCCGCCGCCTCCTCCTCGTCGGCCTCGCGCCTATCCTGGAGGTGT GTAGTTTTGAGCTCGAAGCCATCGATTACTTGCTTCTCCTGGACGGCGTAGAGGCCCCAG AGGCGCTGCGCGAGTTCTCTGGTGATATATTGTATGTCAGCGCCGCGGTGATGAAGAAGG TGTCCGGGATGCAGTCGGTTGATTCCACCGAGGCGGTTGCTGTCATGCACATGCCTAACC ATTTCCGCGATCTCGGGAGCCATCAGGATGGGGATGCTCTTGATGGTTTGTTCAGTTATC CAAAGAGGATTCTAGTCCTTGATGGGATTCAGGATCCTGGCAACCTTGGAACACTGATAA GATCAGCTTGTGCATTCAAATGGGATGGAGTATTCCTTCTTCCGGCTTGTTGTGATCCTT TCAATGAAAAGGCTATTCGAGCAGCTCGTGGAGCCTCTTTGCAGCTTCCTATTGTCTCTG GTACGTGGCATGACCTGCATGCATTGGTGACAAAGTATCGTATGAAGATGATGGCAGGGC ATCCAGAAAGTAGCAGTGATGCATCCAAAGAAACCTACTCGCTGTCCAACGAACTAGCTG ATTCACTGTTGAATGAGTCTCTGTGCTTAGTGTTAGGAAGTGAGGGCAATGGTCTCTCTG CAGAGACCCTCCAGGCATGTGAGCTTGTAAACATTCCAATGGAAGGTACTTTTGAATCTC TGAATGTTTCAGTTGCAGGTGGTATATTTTTGTTCATGTTACAACCCAAAGGTCAAATAG ACAGAACTTCAACCCCTTAGATTTGCGTCTGTTATTCTGTTTCTTTTGCTGTTATCTTGT TAACTTTTCTTTGTTTTCATTTCTCTGGTTGTTGGTTTCTATGTTTACCGTTAATGCTGA TTCAAAGTAAAGGAACATTTTGTTTAATCCAGTTTACCTTTTGAGTGATGAGAAACATAA CGTAAAGAAAAATGAATCTGATGACCTGTTACTCATGGAACTTCTTACTAATTACTATGA TAGCATGGTGTAGTTTCACTGGCTCTTTAATAAATGAAGAATTCTGGGAGTATTGATTGA TTATTAACACTCTGATGAGACTGTCTGGCATTACATAGAATACAGAAATGGTTAGAGGCT TAAAGCGTAATGGTTAAGGTTTCCGAGTATTATATCAAGGAGAGATCGAAACATGGTGCC GGCCAAGAAAACCCCCGAACCCTGGCCCTCATCACTAATGGGCCGATCAACTGCCCATTC TGCAACGGTCCAGCCAGAGGGCGGCGCACAGGATATCGATCCCCGAGAGGGGCGGGGCAC AGCGAGGGGATTTTTTAACCAAACCCGAAATTCGCCCCTGAGGGGGATTGAATCCGGGAC CTGGAGGTGCTACTCCGAAGCCTTAACCATTACGTTAGAGGCCCTTTCGCATTCACATAG CTGAAAGGCTGGCATGGTATCGTAGATACACCATACACGCCTTCTCAGTTGGGTTTTTGT TAATGTCAAATGTATCTACATAACATGACCTGGTATCATGCCTGCACCACAATGACATCT TTCACATGATTTATTACAAGATCTTCCATGATCCACCACTGCTGACCTGATATGGTGCTG CCCTAAAATAAAACACACTATCAACTTCTATTGGTGTCATTTCAACTTACTTTGGCCTTA GTTAGTTGGTGCTCAGAAGGAATGCTTTTAGGTGAAAGCTTGTTTTGTTAGCAGGTAAAA GCATCCTGACTCATAAGCAATCTGGATTTGCTATGGTAATAGATGTGTGCTTCTACATGT CTGTCGCTCACTGAAAATGGTAGTGCTCCTTTTTATTCATATCTTCTTTTGGTAGATCAA CATCTTTCAAGTGGTCTTGTTTGGCCAATTGATATAGAGTTTTTTGTGCATATACAATTG TTATTATGCCCTTTTTTTTATACTTGAATAGTTATTGTTTATATATTTTCATGGTAAATA GTATGACCACTCAGTTTCAACTTCTCCTTGGTCTCTTTAATTTTTTTGTTCATTTGGAGT TTATCTACACAATCTGAAGAAACATTCTTTGGTGGTTGGTGGCATGGACAAATGGCATGA TCAGTGGCCAAGTGCTGCAAGGGCTGAATTCCATTGTCAGGTGGATCACCATATCTACAT TGTGCTCTTTTGCTGGCCACTGAGGAGATGAAATATTGGAGTTTGGCAGGAGCTAAGGGA ATAGGAGATTTCGTTTCTAACTAGCCCTTTCATAGATGCTTAGGTGTTTGAGGTCGAGGT TGTGTCCTATTGGGTTGGCATATATATAGTTTTTTCTTCTTTAATTAATACAGCGATATG CAATTCCCTTGCGTGTTCGAGAATGCATTTTTTTTCCTTTTTAAGTATTTGTTTGATTGC TTCAATGCTTTCTATTTATACACAATAAGTACAACAGATTTGTATATGGTGGTGGTAAAC TGCCCATCTTACACTTCTTTCATTTTTGAAGAAATGCTATTGTATTGTCATAATATTGAC AATTAATGTTTTTAAATCCCTTTCTTGTCTCGGGAACTATTTGAATGGCAATGAGAACTG CTAGTGCATTTCTTGTCTTGTCTGCTGCAACTGGAAACAAATAGCCCTTTCTCTTACTTG TATAGAGGACATGCCCTATGTTTGGTATGCTGAGCTACCACCCACTAGGGTGTCTAGGTA CAAGTAATCAAACACATATTTATACACAACATGTACTGTACTGAAAGATTATAGAGTCTG CCACATAGCTACATCACAGCATCCCCATGACTTTGCCTCCAAAGTACTAATGGGATCTGT GCTGACACCTGACAAGGGCATCCTTATGTAAGCAAAGATAAAGCAAAGTTTGATCCATGC GCTGGCTTGCACTGCATAACATCAAAGTGTTGGATAAAGCAACAAAACACTACTTGTGGT TGTTATCTGAACAAACCATTCTGGGAACATGACTCTCTACTGCTTTACTGCTGTGTCGGT TTGCTTTTTATCTATTAGTATTTAAACAGGTTGTTCAGATTCTGTCTTAGGTGATTCAAG CACTAGTTAGTAACATCCTCAACAAGTTAGCCATTAGGAAACTCATTGCAAACCTTACAC AGTTCCGCTTTCTTTCATAATAATGGATTCAAATGGTTTAGGTGTTTAGCTTATACTTAT ATATTCCAATACTGTTTATGACTTACATAATCTAAAAGAATGACTGAGACTTTGAAGATT TGCTTATCCCAAACAAATACTAGTTACCTAAGGCCATTTGTATGTCACTCTCCCTGTTCC AAAGTATAGATCATTTCGGTTTTTTAGGTATGCAGCTTTTGCTATGTACATGAATATATA GTTGAAAAGCCAAAACAATCTCCACTGGGAATGGAGTATTTCCAGCTTTAGGGCTAGTTT GGGAACCCCATTTTTCTAAGGGATTTCTATTTTCCTAAGGGAAATTAGTTCATTTTCCCT TGGAAAAATAGAAATCCCTTGGGAAATTGAGTTCCCAACCTAACCCTTATTGGTGAAATA TGAGGAAAGACACAAGGAAAAGTGGTAATAGTTTCAGCATGTTTGGTTTGCGGCACGAGG TCACCTGGAATGATCTGATCCTAGAACCAAAGCTGACAACGCTGTTTGGTTTTCAGCTTG GAACTGCACCACCCATCAGGTGCTTTCAAGGAGAGTTAATCGTAAAAGGACTTGAAGTAC AAAGACACTCCGTAAAAAAGTGCTGGACCAACCCATTCTATGCTGGTAGGTTCAGCGGAT GCCACATGAGTTCTTCTGTCAAACCAAACACCCTGTTTGTATTTCTTGTTTGTTCCTGAT CTTTTTTTTGTTCAGTTAAATTTAAGAGAAAGAAAAGAAAGTTTATATTTGCCTCAACTA TTTAGTCATTGTGGGCTGAATTCTATAGGACGATGTAGCCTTTCAAAACTTGACTTCTAG AAAGAATATATGTAGTGATTGTAGTTGCATCTGTAATAGTTCTTAATTCTTGAGCTGACC AGACTTAGTACACGCAAGCAAGATCCTATACAAGGTGGTAAGACAAAATTTGTCAGCTTC CATTTCTCCTAATGCTTTTTGTTAGTGATTCTAATGTCATTGTGCATAAATCCCTCGTCA TTTTTTCCTGTGATAGTGACAGCCCTTATTTCCAAATTATGCTTGTTTGGTGATTAGCTG CCACTGGAACATCAGCTACTTGTTTCAGAGCTAAACTTGTACAGTTCCCTGCCTCCTACT CAAGTGTAGTTTTCCCTGTTGAAATGATCGTGCGTTTTCAACTTGGATCTCACATGTGCA CAAGTACAAACCGAGAGCAGTGATGGGCCAATCATATTCAGGCCAATATAGGCAAGTTGT TGTTGTCGTGTCCAGTGGCCAGCGCGCGACGGTGCATGTTTTCTCGTGAAACTGTGTAGG TATCTTTGCCCTGTCAATGCCAATGCCCATGGACTCATACAATTGCCTTTCTGACTCTGA ATCACGCAGGTTTGGTGTTCCTGCAACGCATGCCATTGCTTTCGGTCCTTTTGGTGTTTT GCAGTGTGCTGGAAAGGGATTGGGTTTGGTGGTGTTGATAGATCTGTGATCATCTATATA TAATAGCATTGGGTGGCCACTGATTGGTGCATCACTCAGCTGAATTAAGCACTGCCAGGC TGGTGAGTGTTTACTCTCTCGGCTTCTCTTTGGGAAGTAGCAATCGGATCGCGTAAAGAA AGCTGAGTTGTTGCGGCCTCTGTCGCAGCTGCATACGCGCAATGCATACAATGAGCTGTA TGCTGGTCGTCCAGAGAATTTGAGGGAATATTTCGCTTTATTTATTGGGGAGGGATTTTA GACTCAGAGAGAGTTGCCCATGTGGATGTCGGGCTTTATCATCTGCAGAAGCTCCTGGGA TCCACTTGCTTTGCAGACTATTCGATAAGGGAAGGGACTCTGATTATTCGACAGGGAAAA GGAATTATGTTTCGTAGGAAGGAGATTAGAACTTAATTAGTTCGATTTATGCAGCAGGAA TCTGGGTAAACTGTGCGTCATTCCAAATTAAAGCGAGGCTCTAGTGGGAAGGAGAAGGGA ACTCATGTCGGTGGCTCTAAGTGGAAAGGAAACCAATGCAACTTGTCTGTCATATATAGA GTCATAGAGAAGATTATATTTACTCAGTTGTTTGTTTGGCCCACTAAACTGTCAGGGCTT CCAAAAGACTCTGGGTCTGTCAGCCTGCAACCATGTCCTGACCCATAGAAAAAAATAAAT TTAAGTTTTGACAATTGTTCTTTGAATTTTTATGTAGATACGGCACAAGGTCAATATTTA CTAGATTCACTATGAAACTTTATAAAATATATGATTATTGTCAT