Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033492_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:1:264208579:264214571:1 gene:Zm00001d033492 gene_biotype:protein_coding transcript_biotype:protein_coding description:High affinity cationic amino acid transporter 1
Sequence

ATGCCCCCCACCGCCACCGAAGCCACCTCGTCGTCGGCGACCAGTGCCACCTCGTCCACG
GATGCCGACGCCCCGGGCCCCACCTCGCCATCGCCGTCCCGGCGCGCGGCGCCCACTCTG
CTCCTCGTCGCCTTCCTCGCCGCACTCCTCATCTTCTCCACCGGCGACGATGCCACGGCG
CAGCCGCTCAACGGTGTAAGCTTGCAAAACCCAGAGGTTTCATTTGTTCCCTCCCCCTTG
GCTGGACAATTTTGTGAGCGAGTCCTACTATCTGGAGTGCCAAGGTTACATCTTGATAGT
TATGCAAGCCAAATTCGTGTCAAAATGAATGTGTCTCAATCTATTCCTGAGAAGTTCCAT
TGGAAAATAGAGGTTTGCTTTCATAGGAATGCCTCTATGGGTTTATGCCAGTGTGAGGCG
GGTGAGTGGCAAGGTTTTCAAGGTGGGATGTGGACTGCTGTAAGTTCTCCATATGGAAAC
AAATATGTTGATCTGAAATTGGCTGATAAGAAACCTGCTAGGTTCACTCTTTCCATTCAG
GAAGAGTTTCAGAAATGGCGTCTGGCTTGCCTTGGTATTGGATTTGTATTGCTATTCCTG
TCACCAATTATTAGCAAATGGGTTCCCTTTTACTATAGCAGCTCTATGGCTCTTGGAATC
CTGGCTGTTGTTCTTATTGTTATTTTCCAGGGGATGAAACTGCTACCAATGGGCAGGAAG
AGTTTATTTTACCTTGCAATTTATGGATCTGTGTTAGGTGTTGGTTCCTATGCTGTACAC
TACTTCTCAACATTGGTCTCTTCTATTCTTGAAAACTTCGGCTTGAGTGAAGAGTTATAC
AACCCTGTTTCTATCTTCCTGCTGGTAGCAATTGTCTTGACTGGAGCTGGTTTTGGCTAT
TGGATGGTCAGGAGATTTATCCTTTCCAAAGATGGAAGTGTAGATGCTGGGATAGCGCAG
TTTGTGAAGTGGGCTATGCGTGTTGTTGCTACATTTTTCATTATGCAGAGCACACTTGAT
CCTCTTCTAGCACTGGTTGCTCTTGCTTTTAGCTGGTGGTTATGCTCTCTGTTGACTACA
AAGAAAGTTCAGAAGACCATGACCCAGAAACAAAAGCAATCAAAGGTTCTTTCTCAGCAA
ATGCTTACTCAAGGATTGCCCACGGGTCCTAAAATCCAGTTTTTAAGTCCATCTAAGACA
GGCTTTGGAGGAACCACATCTAGAACTTCCGCCACACAGTATGGTCGGAGCAATTTGGCC
AATCGAGGTATGGTCTGCTCAGCACTTGCAAAGCGCGCAGTGCCCAACGAAGACGAAGAC
CACTACTCCACCTTCCACAACATCCAGCCACGGAAATATACGAAGCAGGAATGGGAGGAC
TTCACCCAGGAATCGACTAGGAAGGCGCTTGCGGAGTGCACAGCTACCCCAGAGTTTGCC
CAGTGGGTCGGTGACAACGCTCGTCGTCTGCAAGTAGAGAAAGAGGAGGACAACTTGTCA
GAGGAAGAGATCATGGAGAGCTCCAGCTCGTCGGAAGAAACTGGGGATGAAGCTGATGGA
GCTCCTGGCCTGATCAGACTGTGGGGCTAG

Peptide Sequence

PEP ID

Zm00001d033492_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:1:264208579:264214571:1 gene:Zm00001d033492 transcript:Zm00001d033492_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:High affinity cationic amino acid transporter 1
Sequence

MPPTATEATSSSATSATSSTDADAPGPTSPSPSRRAAPTLLLVAFLAALLIFSTGDDATA
QPLNGVSLQNPEVSFVPSPLAGQFCERVLLSGVPRLHLDSYASQIRVKMNVSQSIPEKFH
WKIEVCFHRNASMGLCQCEAGEWQGFQGGMWTAVSSPYGNKYVDLKLADKKPARFTLSIQ
EEFQKWRLACLGIGFVLLFLSPIISKWVPFYYSSSMALGILAVVLIVIFQGMKLLPMGRK
SLFYLAIYGSVLGVGSYAVHYFSTLVSSILENFGLSEELYNPVSIFLLVAIVLTGAGFGY
WMVRRFILSKDGSVDAGIAQFVKWAMRVVATFFIMQSTLDPLLALVALAFSWWLCSLLTT
KKVQKTMTQKQKQSKVLSQQMLTQGLPTGPKIQFLSPSKTGFGGTTSRTSATQYGRSNLA
NRGMVCSALAKRAVPNEDEDHYSTFHNIQPRKYTKQEWEDFTQESTRKALAECTATPEFA
QWVGDNARRLQVEKEEDNLSEEEIMESSSSSEETGDEADGAPGLIRLWG

Transcript Sequence

Transcript ID

Zm00001d033492_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:264208579:264214571:1 gene:Zm00001d033492 gene_biotype:protein_coding transcript_biotype:protein_coding description:High affinity cationic amino acid transporter 1
Sequence

GAGCTGCTTGCTTGAATTCCCGGGGTTATCAAAAGGGGGGCTTGCTTGAATTTAAAGCCC
TGCCATCTGCCCCGGAGCGCCGCCGCGCGAGATGCCCCCCACCGCCACCGAAGCCACCTC
GTCGTCGGCGACCAGTGCCACCTCGTCCACGGATGCCGACGCCCCGGGCCCCACCTCGCC
ATCGCCGTCCCGGCGCGCGGCGCCCACTCTGCTCCTCGTCGCCTTCCTCGCCGCACTCCT
CATCTTCTCCACCGGCGACGATGCCACGGCGCAGCCGCTCAACGGTGTAAGCTTGCAAAA
CCCAGAGGTTTCATTTGTTCCCTCCCCCTTGGCTGGACAATTTTGTGAGCGAGTCCTACT
ATCTGGAGTGCCAAGGTTACATCTTGATAGTTATGCAAGCCAAATTCGTGTCAAAATGAA
TGTGTCTCAATCTATTCCTGAGAAGTTCCATTGGAAAATAGAGGTTTGCTTTCATAGGAA
TGCCTCTATGGGTTTATGCCAGTGTGAGGCGGGTGAGTGGCAAGGTTTTCAAGGTGGGAT
GTGGACTGCTGTAAGTTCTCCATATGGAAACAAATATGTTGATCTGAAATTGGCTGATAA
GAAACCTGCTAGGTTCACTCTTTCCATTCAGGAAGAGTTTCAGAAATGGCGTCTGGCTTG
CCTTGGTATTGGATTTGTATTGCTATTCCTGTCACCAATTATTAGCAAATGGGTTCCCTT
TTACTATAGCAGCTCTATGGCTCTTGGAATCCTGGCTGTTGTTCTTATTGTTATTTTCCA
GGGGATGAAACTGCTACCAATGGGCAGGAAGAGTTTATTTTACCTTGCAATTTATGGATC
TGTGTTAGGTGTTGGTTCCTATGCTGTACACTACTTCTCAACATTGGTCTCTTCTATTCT
TGAAAACTTCGGCTTGAGTGAAGAGTTATACAACCCTGTTTCTATCTTCCTGCTGGTAGC
AATTGTCTTGACTGGAGCTGGTTTTGGCTATTGGATGGTCAGGAGATTTATCCTTTCCAA
AGATGGAAGTGTAGATGCTGGGATAGCGCAGTTTGTGAAGTGGGCTATGCGTGTTGTTGC
TACATTTTTCATTATGCAGAGCACACTTGATCCTCTTCTAGCACTGGTTGCTCTTGCTTT
TAGCTGGTGGTTATGCTCTCTGTTGACTACAAAGAAAGTTCAGAAGACCATGACCCAGAA
ACAAAAGCAATCAAAGGTTCTTTCTCAGCAAATGCTTACTCAAGGATTGCCCACGGGTCC
TAAAATCCAGTTTTTAAGTCCATCTAAGACAGGCTTTGGAGGAACCACATCTAGAACTTC
CGCCACACAGTATGGTCGGAGCAATTTGGCCAATCGAGGTATGGTCTGCTCAGCACTTGC
AAAGCGCGCAGTGCCCAACGAAGACGAAGACCACTACTCCACCTTCCACAACATCCAGCC
ACGGAAATATACGAAGCAGGAATGGGAGGACTTCACCCAGGAATCGACTAGGAAGGCGCT
TGCGGAGTGCACAGCTACCCCAGAGTTTGCCCAGTGGGTCGGTGACAACGCTCGTCGTCT
GCAAGTAGAGAAAGAGGAGGACAACTTGTCAGAGGAAGAGATCATGGAGAGCTCCAGCTC
GTCGGAAGAAACTGGGGATGAAGCTGATGGAGCTCCTGGCCTGATCAGACTGTGGGGCTA
GCATGCCGGTTGAACTTGTAAGAGCCCCAAGCATATATGCTCCTGCCATTTCACGTGTAA
AGAGTAGCAACCGGTCATTTTAACTAGTGTAGCAGCAGGGTAGGGTGGTAGCAGCTGATT
GCTTTCGCAGTTGTTGCCACGGTGGCAGTAGTTGGCTAGCCATCTCAGGTCAATTGATGC
TAGGTTTAGCTAACTGTCTGTTATCAGCGGATTCTTAGTTCTCTAGAGCTGATATATGTG
TAATGGTTTAAACAATCTAATCTGTGACTGGATCCAGCATTTTGTTGATCTGGTTGGAAG
TTGGGTCGTTAGCATTTCTTGGCGCTCCA