Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033377_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:261041495:261042349:-1 gene:Zm00001d033377 gene_biotype:protein_coding transcript_biotype:protein_coding description:9-cis-epoxycarotenoid dioxygenase NCED3 chloroplastic
Sequence	ATGCCCATGGCGGCCTCGGTTCTTCTCGCCGCACCGGCTCCTCTTCTCGCCGCGTCACAT CCACGGCCCACGGGCGAACCCGCCGCCTCCCGCACCGTGCCTGCGAGCGCCCGCTTCTCC TCTCCGGGTCTCCTCTGTTCTCCGCGATTCCTCCGCCGCCCCGGCAATAACCCACTTGAT CCTGCAGAAACCCCTCACGCGATCCACGCCAATTCAGCCACCGCCGATGTAGGGTCTCGC CCCGCCCACCTCTATCTCCATACACCGGCACCTGTCGGTCGGGTCCAGGCCCGGGCCTCC AACTCCGTCAGGTTCTCGCTCCATGCCGCAGAGTGCCTCCAGGCGTCGTTCCACGCCGAC CTGCCGGCGCCGTCCAAGAAGCCCACCACCATTGCCGTCCCTAGGCACGCTGCGGCGCCG CGCAAGTCTGGCGGCGGCGGCAAGAAGCAGCTCAACCTGTTCCAGCGCGCGGCGGCGACC GCGATAGACGCGTTCGAGGAGGGGTTCGTGGCCAACGTCATCGAGCGGCCCCACGGGCAA CCCAGCACGGCCGACCCGGCCGTGCAGATCGCCGGCAACTTCGCGCCCATCGGGGAGAGG CCGCCCGTGCGCGGGCTCCCCGTCTCCGGCCGCATCCCGCCCTCCATCAGCGGCATCTAC GCGCGCAACGGCGCGAACCCCTGCTTTGACCCCGTCGCTGGGCACCACCTCTTCGACGGC TCTGCCTCAAAGTTGCAGCCCGCTACACTGGAGCTCTGTTCAGTCGCACCCCTCGGGCCC CAACCACGGCAGCGAAGCCGTCCTCACCGGTCCCCTCCTCCTTCCCCTCCCGCAGTCCAG CAAGCAGCAGCATGA

Peptide Sequence

PEP ID	Zm00001d033377_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:261041495:261042349:-1 gene:Zm00001d033377 transcript:Zm00001d033377_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:9-cis-epoxycarotenoid dioxygenase NCED3 chloroplastic
Sequence	MPMAASVLLAAPAPLLAASHPRPTGEPAASRTVPASARFSSPGLLCSPRFLRRPGNNPLD PAETPHAIHANSATADVGSRPAHLYLHTPAPVGRVQARASNSVRFSLHAAECLQASFHAD LPAPSKKPTTIAVPRHAAAPRKSGGGGKKQLNLFQRAAATAIDAFEEGFVANVIERPHGQ PSTADPAVQIAGNFAPIGERPPVRGLPVSGRIPPSISGIYARNGANPCFDPVAGHHLFDG SASKLQPATLELCSVAPLGPQPRQRSRPHRSPPPSPPAVQQAAA

Transcript Sequence

Transcript ID	Zm00001d033377_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:261041495:261042349:-1 gene:Zm00001d033377 gene_biotype:protein_coding transcript_biotype:protein_coding description:9-cis-epoxycarotenoid dioxygenase NCED3 chloroplastic
Sequence	ATGCCCATGGCGGCCTCGGTTCTTCTCGCCGCACCGGCTCCTCTTCTCGCCGCGTCACAT CCACGGCCCACGGGCGAACCCGCCGCCTCCCGCACCGTGCCTGCGAGCGCCCGCTTCTCC TCTCCGGGTCTCCTCTGTTCTCCGCGATTCCTCCGCCGCCCCGGCAATAACCCACTTGAT CCTGCAGAAACCCCTCACGCGATCCACGCCAATTCAGCCACCGCCGATGTAGGGTCTCGC CCCGCCCACCTCTATCTCCATACACCGGCACCTGTCGGTCGGGTCCAGGCCCGGGCCTCC AACTCCGTCAGGTTCTCGCTCCATGCCGCAGAGTGCCTCCAGGCGTCGTTCCACGCCGAC CTGCCGGCGCCGTCCAAGAAGCCCACCACCATTGCCGTCCCTAGGCACGCTGCGGCGCCG CGCAAGTCTGGCGGCGGCGGCAAGAAGCAGCTCAACCTGTTCCAGCGCGCGGCGGCGACC GCGATAGACGCGTTCGAGGAGGGGTTCGTGGCCAACGTCATCGAGCGGCCCCACGGGCAA CCCAGCACGGCCGACCCGGCCGTGCAGATCGCCGGCAACTTCGCGCCCATCGGGGAGAGG CCGCCCGTGCGCGGGCTCCCCGTCTCCGGCCGCATCCCGCCCTCCATCAGCGGCATCTAC GCGCGCAACGGCGCGAACCCCTGCTTTGACCCCGTCGCTGGGCACCACCTCTTCGACGGC TCTGCCTCAAAGTTGCAGCCCGCTACACTGGAGCTCTGTTCAGTCGCACCCCTCGGGCCC CAACCACGGCAGCGAAGCCGTCCTCACCGGTCCCCTCCTCCTTCCCCTCCCGCAGTCCAG CAAGCAGCAGCATGA