Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033370_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:1:260837706:260857730:1 gene:Zm00001d033370 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform
Sequence

ATGTTCAACAAGATCATCAAGAGGGGAAACCGCAAGGGCGCGCGCGGGGACAACGCGGAG
GCCGCCGCGCGCCCCGCAGCGCCCTCCTCGTCCTCCGGGAGCGGCGGCGGCGGCGCGGGG
GCAGCCGCGCCCGTCACCGTCAACCACGCCTCCCGGGCCACAGCGCCTTCGCCGTCCTCG
CCCACTTCGCCGCACGTGGCGCCGTCTGCGCTTGCGACCAACCCGGCGGGGGCGGCGTCG
CCGCCACTCCTCGAGCCGCTCCCGCTCCTCCGCGACGTCGCCGCCGCGGATCGCCCGGGC
CTCTTCCTCCGCAAGCTCCGCATCGTCGCCGCGCTCTTTGACCTTTCGGACTCGCTCAAG
CACCCGCGGGAGAAGGAGGCCAAACGCCAGGCTCTCCTCGAGCTCGTCGATTACGTGCAG
GCTCCAGCTCAGGCTGCGGGCGCCAACGCACCCACGCGCCTCCCGGACCACGTCCAGGAG
GCGCTCGTCGCCGCCATCTCTGCCAACATCTTCCGCCCGCTGCCACCCGCGCTGCACGAA
TCCGCCGCCGCGATCGACCCCGGCGCCGCGCCCGACGAGGAGGAGGAGCCATACCTCGAC
CCCTCCTGGCCACACCTCCAGCTCGTCTATGAGCTCCTTCTCCGATACGTTGTTTCGCCC
GACACCGACACCAAGGTCGCCAAGCGGTATGTGGACCACGCCTTCGTCCTCCGTCTCCTC
GACCTCTTTGACTCCGAGGATCCGCGTGAGCGCGAGTACCTCAAGACCGTGCTCCACCGC
ATCTATGGCAAGTTCATGGTACACCGACCATTCATTCGCAAGGCCATCAACAATGTGTTC
TACCGGTTCATCTTTGAAACGCAGCGCCACAATGGCATAGGGGAGCTCCTTGAGATCCTT
GGAAGCATCATTAATGGCTTTGCCTTGCCAATGAAGGAGGAGCACAAGCTATTCCTTGCC
CGTGCTCTCATCCCCCTGCATAAGCCCAAATCTGTTGCGATCTACCATCAGCAGCTGTCC
TATTGTATTGTTCAGTTCGTTGAGAAGGACTACAAATTAGCAGATACTGTGATTAGGGGT
CTGCTCAAATACTGGCCAGTCACAAACTGCCAGAAAGAGGTGTTGTTTCTGGGGGAGCTT
GAAGAAGTGCTCGAGGCAACACAGCCTGCAGAGTTCCAGCGGTGCATGGTGCCACTGTTC
AAGCAGATTGGACGATGCCTTAACAGTTCTCACTTCCAGGTTGCTGAACGTGCTTTGTTC
TTGTGGAACAATGATCATATTGTAAGCTTGATAGCACAAAATCGTGTTGTTATATTTCCA
ATTATATTTGAAGCTCTTGAGAGGAATATACAGAGCCACTGGAATCAAGCAGTTCATGGT
CTCACTGCAAATGTGCGCAAGATGTTTTTGGACATGGACAGTGAACTATTTGAAGAGTGC
CAGCAGCAGTACATGGAGAAACAAGCGAAAGCCAAAGAGATACAGGAACAACGAGAATCA
GCATGGAGACAATTGGAAGCTGTTGTTGCTGCCAAGGCTGCTGGAGATGACATGGTTTTG
GTCAACTAG

Peptide Sequence

PEP ID

Zm00001d033370_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:1:260837706:260857730:1 gene:Zm00001d033370 transcript:Zm00001d033370_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform
Sequence

MFNKIIKRGNRKGARGDNAEAAARPAAPSSSSGSGGGGAGAAAPVTVNHASRATAPSPSS
PTSPHVAPSALATNPAGAASPPLLEPLPLLRDVAAADRPGLFLRKLRIVAALFDLSDSLK
HPREKEAKRQALLELVDYVQAPAQAAGANAPTRLPDHVQEALVAAISANIFRPLPPALHE
SAAAIDPGAAPDEEEEPYLDPSWPHLQLVYELLLRYVVSPDTDTKVAKRYVDHAFVLRLL
DLFDSEDPREREYLKTVLHRIYGKFMVHRPFIRKAINNVFYRFIFETQRHNGIGELLEIL
GSIINGFALPMKEEHKLFLARALIPLHKPKSVAIYHQQLSYCIVQFVEKDYKLADTVIRG
LLKYWPVTNCQKEVLFLGELEEVLEATQPAEFQRCMVPLFKQIGRCLNSSHFQVAERALF
LWNNDHIVSLIAQNRVVIFPIIFEALERNIQSHWNQAVHGLTANVRKMFLDMDSELFEEC
QQQYMEKQAKAKEIQEQRESAWRQLEAVVAAKAAGDDMVLVN

Transcript Sequence

Transcript ID

Zm00001d033370_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:260837706:260857730:1 gene:Zm00001d033370 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform
Sequence

GGGAATTCGTCGCCTGACCGATCGGCCGATCCACTGCCGTCGGCACCCCAATCCGCCGCT
GCCGCCATGTTCAACAAGATCATCAAGAGGGGAAACCGCAAGGGCGCGCGCGGGGACAAC
GCGGAGGCCGCCGCGCGCCCCGCAGCGCCCTCCTCGTCCTCCGGGAGCGGCGGCGGCGGC
GCGGGGGCAGCCGCGCCCGTCACCGTCAACCACGCCTCCCGGGCCACAGCGCCTTCGCCG
TCCTCGCCCACTTCGCCGCACGTGGCGCCGTCTGCGCTTGCGACCAACCCGGCGGGGGCG
GCGTCGCCGCCACTCCTCGAGCCGCTCCCGCTCCTCCGCGACGTCGCCGCCGCGGATCGC
CCGGGCCTCTTCCTCCGCAAGCTCCGCATCGTCGCCGCGCTCTTTGACCTTTCGGACTCG
CTCAAGCACCCGCGGGAGAAGGAGGCCAAACGCCAGGCTCTCCTCGAGCTCGTCGATTAC
GTGCAGGCTCCAGCTCAGGCTGCGGGCGCCAACGCACCCACGCGCCTCCCGGACCACGTC
CAGGAGGCGCTCGTCGCCGCCATCTCTGCCAACATCTTCCGCCCGCTGCCACCCGCGCTG
CACGAATCCGCCGCCGCGATCGACCCCGGCGCCGCGCCCGACGAGGAGGAGGAGCCATAC
CTCGACCCCTCCTGGCCACACCTCCAGCTCGTCTATGAGCTCCTTCTCCGATACGTTGTT
TCGCCCGACACCGACACCAAGGTCGCCAAGCGGTATGTGGACCACGCCTTCGTCCTCCGT
CTCCTCGACCTCTTTGACTCCGAGGATCCGCGTGAGCGCGAGTACCTCAAGACCGTGCTC
CACCGCATCTATGGCAAGTTCATGGTACACCGACCATTCATTCGCAAGGCCATCAACAAT
GTGTTCTACCGGTTCATCTTTGAAACGCAGCGCCACAATGGCATAGGGGAGCTCCTTGAG
ATCCTTGGAAGCATCATTAATGGCTTTGCCTTGCCAATGAAGGAGGAGCACAAGCTATTC
CTTGCCCGTGCTCTCATCCCCCTGCATAAGCCCAAATCTGTTGCGATCTACCATCAGCAG
CTGTCCTATTGTATTGTTCAGTTCGTTGAGAAGGACTACAAATTAGCAGATACTGTGATT
AGGGGTCTGCTCAAATACTGGCCAGTCACAAACTGCCAGAAAGAGGTGTTGTTTCTGGGG
GAGCTTGAAGAAGTGCTCGAGGCAACACAGCCTGCAGAGTTCCAGCGGTGCATGGTGCCA
CTGTTCAAGCAGATTGGACGATGCCTTAACAGTTCTCACTTCCAGGTTGCTGAACGTGCT
TTGTTCTTGTGGAACAATGATCATATTGTAAGCTTGATAGCACAAAATCGTGTTGTTATA
TTTCCAATTATATTTGAAGCTCTTGAGAGGAATATACAGAGCCACTGGAATCAAGCAGTT
CATGGTCTCACTGCAAATGTGCGCAAGATGTTTTTGGACATGGACAGTGAACTATTTGAA
GAGTGCCAGCAGCAGTACATGGAGAAACAAGCGAAAGCCAAAGAGATACAGGAACAACGA
GAATCAGCATGGAGACAATTGGAAGCTGTTGTTGCTGCCAAGGCTGCTGGAGATGACATG
GTTTTGGTCAACTAGATGATAGCTGCTCACTTATTTCATGAGCGTCATGTGCGCTTATCG
AGGCAACAAGGTATCGGTGCTAGTTGCGGTGCTCTTATATCAACATTGTTGACTTGGGAC
TATCAGATCCATGTTCCTTGCATCAGTGCAAAAAAATGCGGACCGAGTTTGAACACATTG
GCGGCAGCGAAAGCCAATTCATGCAGAATTTCTTTGCCTAGTGAGATCCTGCTGTAGTTC
TGAGCCCTTGCTTTATTCAGCCCCTCCTTTTCTGTTGTGTTAATTTATGAATAATTGGAC
TCTTGTGTTAATCCTTCAGTGTCTGCCCTAGTTACGGACCCACAATTGGGAAAATCCAAG
TAGAGAAAATTACTGAGCTAGATTGAAATCTTTTCAATTTATTTTTCCTTTTTTACTTCT
TTTCTCCTTGTTGGGAGTTAATTTCAGTTCATGTTGTTGTATGGAGGTAACAGCACAAAT
GCAGATAAAAGCTCATCTGTAGTAGGAACTGTTTCGACGTTGCTGTGGTTGTTTTAGCAA
TATAATGGCTCACTGGTACGCCCGATTAAGT