Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033367_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:260532563:260535314:1 gene:Zm00001d033367 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metal transporter Nramp3
Sequence

ATGGCCGCCAACCACAACGCTGATGATGCCGCTAGAGAGCCTGTCGCGAGCGCCTCTCCA
CCCGCCTCTGAGGCCGAGCACCGCGCCCTCCTCCGACCATCGTCGTTCATCTCCGCCATC
TCAGACGACAATGAAGGGTGCAAGGAGCGGGCGTTCGAGCCATCCGAGAAGGTCATCGTC
TCCGTCTCCGGCGACCCCGAAGGCGATGCTAGCGAAGAGCGCGCCTTCTACGCCTCGGGG
GGCTGCATGCCGCCCTTCTCGTGGCGCAAGCTGTGGGCATTCTCGGGGCCCGGCTTTCTG
ATGAGCATCGCGTTCGTAGACCCGGGGAACATCGAGGGCGACCTGCAGGCCGGTGCCACA
GCGGGCGGCACGCTGCTCTGGGTGCTCGTGTGGGCGACGGCCATGGGCCTACTCGTGCAG
CTTCACGCCGCGCGCCTCGGGGTGGCCACAGGGAGGCACCTTGCTGAGCTGTGCCGTGAC
GAGTACCCGGATTGGGCGCGCCGCGCGCTCTGGTTGATGGCCGAGGTCGCCTTGGTCAGC
GCTGACATCCAGGAGGTCATCGGGAGCGCCATTGCCATCAAGATCCTCAGCCACGGCCTG
TTGCCTCTCTGGGGCGGTGTTGTCATTACCGCTTTGGATTGCTTTATGATTCTTTCCCTC
GAGAACTATGGGGTGAGAAAGTTGGAAGCTCTATTTGCGGTTCTAATTACAACAATGGCG
TGCTCCTTCGCATGGATGTTTGTAGAGACCGAGCCTAGTGGCAAAGATCTATTCATTGGT
ATTCTTGTCCCAAAACTAAGCTCGAGATCGATAAAACAGGCCGTTGGCCTTGTTGGATGT
GTCATCACACCCCACAACGTGTTCCTCCATTCCGCTCTTGTGCAGTCAAGAAAGATTGAC
CCGGACAAGGAATACGAAGTCCGTGAAGCGTTGAGGTACTATTCCATTGAATCCACCCTG
GCATTGGTAGTGCCCTTGATGATAAATTTATTTGTCACGACAGTTTTTGCAAAGGGGTTC
TATGGTACCAAGGAAGCGGATAGTATCGGCCTTGAGAACGCCGGGAAGTATCTGCAGGAG
AAGTTTGGGGGAGACTTTTTCCCTATCCTTTATATCTGGGGTGTTGGACTGTTAGCCGCC
GGCACCAGTAGCACCATAACTGGAACTTACGCTGGGCAGTTTATAATGGGTGGGTTTCTG
AACTGGCGGCTGAAAAAATGGATCAGGGCATTGATCACTAGAAGCTTTGCGATTGTTCCG
ACGATAATCGTCGCTTTGTACTTCAACAATTCTGGCTATGAGCTGGATGTTCTCAATGAG
TGGCTCAATGTGCTCCAGTCAGTTCAGATCCCTTTTTCTCTCATCCCACTGATAACACTG
GTTTCAAAGGAGGAAGTCATGGGGGTGTACAAGATAGGTCCAAGAATGAAAATTCTAACC
TGGATAGTTGCCTCTCTACCGATCCTAATCAACAGCTATATGTTGTTGGACTTCTTCTCT
CTGGAAATGGGAGGCATGTTGTACAACACAACTCTTTGCGTGGCTGTGGTGGCTTATTCT
ATGTTCATATTATATCTTATTTTTCGAGGCATGAAATTTCCTTCCTATCTGACGACGACG
TAA

Peptide Sequence

PEP ID

Zm00001d033367_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:260532563:260535314:1 gene:Zm00001d033367 transcript:Zm00001d033367_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metal transporter Nramp3
Sequence

MAANHNADDAAREPVASASPPASEAEHRALLRPSSFISAISDDNEGCKERAFEPSEKVIV
SVSGDPEGDASEERAFYASGGCMPPFSWRKLWAFSGPGFLMSIAFVDPGNIEGDLQAGAT
AGGTLLWVLVWATAMGLLVQLHAARLGVATGRHLAELCRDEYPDWARRALWLMAEVALVS
ADIQEVIGSAIAIKILSHGLLPLWGGVVITALDCFMILSLENYGVRKLEALFAVLITTMA
CSFAWMFVETEPSGKDLFIGILVPKLSSRSIKQAVGLVGCVITPHNVFLHSALVQSRKID
PDKEYEVREALRYYSIESTLALVVPLMINLFVTTVFAKGFYGTKEADSIGLENAGKYLQE
KFGGDFFPILYIWGVGLLAAGTSSTITGTYAGQFIMGGFLNWRLKKWIRALITRSFAIVP
TIIVALYFNNSGYELDVLNEWLNVLQSVQIPFSLIPLITLVSKEEVMGVYKIGPRMKILT
WIVASLPILINSYMLLDFFSLEMGGMLYNTTLCVAVVAYSMFILYLIFRGMKFPSYLTTT

Transcript Sequence

Transcript ID

Zm00001d033367_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:260532563:260535314:1 gene:Zm00001d033367 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metal transporter Nramp3
Sequence

AAATCTGTCTAGTTCACCTCGATGGCCGCCAACCACAACGCTGATGATGCCGCTAGAGAG
CCTGTCGCGAGCGCCTCTCCACCCGCCTCTGAGGCCGAGCACCGCGCCCTCCTCCGACCA
TCGTCGTTCATCTCCGCCATCTCAGACGACAATGAAGGGTGCAAGGAGCGGGCGTTCGAG
CCATCCGAGAAGGTCATCGTCTCCGTCTCCGGCGACCCCGAAGGCGATGCTAGCGAAGAG
CGCGCCTTCTACGCCTCGGGGGGCTGCATGCCGCCCTTCTCGTGGCGCAAGCTGTGGGCA
TTCTCGGGGCCCGGCTTTCTGATGAGCATCGCGTTCGTAGACCCGGGGAACATCGAGGGC
GACCTGCAGGCCGGTGCCACAGCGGGCGGCACGCTGCTCTGGGTGCTCGTGTGGGCGACG
GCCATGGGCCTACTCGTGCAGCTTCACGCCGCGCGCCTCGGGGTGGCCACAGGGAGGCAC
CTTGCTGAGCTGTGCCGTGACGAGTACCCGGATTGGGCGCGCCGCGCGCTCTGGTTGATG
GCCGAGGTCGCCTTGGTCAGCGCTGACATCCAGGAGGTCATCGGGAGCGCCATTGCCATC
AAGATCCTCAGCCACGGCCTGTTGCCTCTCTGGGGCGGTGTTGTCATTACCGCTTTGGAT
TGCTTTATGATTCTTTCCCTCGAGAACTATGGGGTGAGAAAGTTGGAAGCTCTATTTGCG
GTTCTAATTACAACAATGGCGTGCTCCTTCGCATGGATGTTTGTAGAGACCGAGCCTAGT
GGCAAAGATCTATTCATTGGTATTCTTGTCCCAAAACTAAGCTCGAGATCGATAAAACAG
GCCGTTGGCCTTGTTGGATGTGTCATCACACCCCACAACGTGTTCCTCCATTCCGCTCTT
GTGCAGTCAAGAAAGATTGACCCGGACAAGGAATACGAAGTCCGTGAAGCGTTGAGGTAC
TATTCCATTGAATCCACCCTGGCATTGGTAGTGCCCTTGATGATAAATTTATTTGTCACG
ACAGTTTTTGCAAAGGGGTTCTATGGTACCAAGGAAGCGGATAGTATCGGCCTTGAGAAC
GCCGGGAAGTATCTGCAGGAGAAGTTTGGGGGAGACTTTTTCCCTATCCTTTATATCTGG
GGTGTTGGACTGTTAGCCGCCGGCACCAGTAGCACCATAACTGGAACTTACGCTGGGCAG
TTTATAATGGGTGGGTTTCTGAACTGGCGGCTGAAAAAATGGATCAGGGCATTGATCACT
AGAAGCTTTGCGATTGTTCCGACGATAATCGTCGCTTTGTACTTCAACAATTCTGGCTAT
GAGCTGGATGTTCTCAATGAGTGGCTCAATGTGCTCCAGTCAGTTCAGATCCCTTTTTCT
CTCATCCCACTGATAACACTGGTTTCAAAGGAGGAAGTCATGGGGGTGTACAAGATAGGT
CCAAGAATGAAAATTCTAACCTGGATAGTTGCCTCTCTACCGATCCTAATCAACAGCTAT
ATGTTGTTGGACTTCTTCTCTCTGGAAATGGGAGGCATGTTGTACAACACAACTCTTTGC
GTGGCTGTGGTGGCTTATTCTATGTTCATATTATATCTTATTTTTCGAGGCATGAAATTT
CCTTCCTATCTGACGACGACGTAACATGAGAAGAGATTCGTATTGTGAAACTTGGATGGA
GAAAATTGTTGTATGGTAGATTATTGCCATTAGAAGATCACAAAAATGCAGTGTCCATTG
TATAGAGTCACATAAAGTTTCAATTGTTGCAAAGGACTAGTAACTAGTAAGACTGTTGTA
TGGTTTGTACATAAACCTCTAACTACGATTAAAAAATTATCATGAGAGATGAACAACCTA
TGTATTTTACATTAATTTCCTAAGGATATTTTCTTGTT