Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033366_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:1:260525308:260531288:-1 gene:Zm00001d033366 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCGACCGCCTACAGCCTCCGCGCGCCGCCCTCCGCCTCGCAGCAGCGCCTCAGGCTG
CCCCTACCGCCGCCCCCGCCGCCGCTGCCGTTTTGCCCGGGTGGAGGGGCCGCCCGCCGG
AGGAGGGGTGTCGGGGTGGCGTCTGCGTCCGCGTCGCCCTTCGACGAGCTGCACGCGCGG
GGGAGGCCCGTACATGGACCCTCCAAGAAATCCATGCTCTGGAACTTGATCCAGGATATA
GAGCCCTTGGACCTAAGTGTCATCCAGAAAGATGTTGCTCCTGAAACAGTAGATGCAATG
AAGAGGACTATTTCTGGCATGTTGGGTCTTCTTCCATCTGATCAGTTCCGTGTCATTGTA
GAAGCCCTTTGGAATCCCTTCTTCAAGTTATTGGTATCTTCAATTATGACTGGGTATACT
CTGCGAAATGCTGAATACAGGCTTTCTTTTGAAAGAAATCTAGAACTGCCTGAAGAAGGT
GTAGAATGCCTAAAAAGTGATGTCACTGAAGATAATCATCATAACATCAATTTGGGAAGA
CCTGTCACTATTTTTAGATTATCCGAAGAAGACATGCCTCAGGACCCTGGAAAAACCGAT
GAAGCATCATCTTATGAAAATATGGGAGAAGAGCTTGGTGACTTAACACCACAGGCAGAG
GAGTATATTATTCAGATGCAATCTCATTTGAATGCCATGAAAAAGGAGTTACATGATCTC
AGGAGAAAGAATTCTGCCTTACAGATGCAGCAGTTTGTTGGGGAGGAAAAAAACGACTTG
CTGGACTATTTGAGGTCATTAACACCAGAGAAGGTTGCTGAACTATCAGAATCGACGTCT
CCCGGTGTGCAAGAAACTATTCATTCTGTGGTTCATGGTTTGCTTGCTACTCTTTCCCCC
AAGGTACATTCAAAGGCCCCTCCACCGCTAGATAACATTTCTGGTGGTGTTCTAAACCTT
GGGGGCGAGGATGATGATCGTGCAGAACTTGTGGAGAATGCTTCCCTCCCATTTCAGCCC
CTAATATCTGTTCCCCGTGATTATCTTGCACGTTTGCTGTTCTGGTGCATGCTGCTGGGT
CACTACATTCGGGGTCTGGAGTACCGGTTAGAGCTTGCTCGGCTTCTGCGAATATCCAGC
GTGGGTTCTTTCTCTGGTGGAGATGATCATGTTGTTTGA

Peptide Sequence

PEP ID

Zm00001d033366_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:1:260525308:260531288:-1 gene:Zm00001d033366 transcript:Zm00001d033366_T006 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPTAYSLRAPPSASQQRLRLPLPPPPPPLPFCPGGGAARRRRGVGVASASASPFDELHAR
GRPVHGPSKKSMLWNLIQDIEPLDLSVIQKDVAPETVDAMKRTISGMLGLLPSDQFRVIV
EALWNPFFKLLVSSIMTGYTLRNAEYRLSFERNLELPEEGVECLKSDVTEDNHHNINLGR
PVTIFRLSEEDMPQDPGKTDEASSYENMGEELGDLTPQAEEYIIQMQSHLNAMKKELHDL
RRKNSALQMQQFVGEEKNDLLDYLRSLTPEKVAELSESTSPGVQETIHSVVHGLLATLSP
KVHSKAPPPLDNISGGVLNLGGEDDDRAELVENASLPFQPLISVPRDYLARLLFWCMLLG
HYIRGLEYRLELARLLRISSVGSFSGGDDHVV

Transcript Sequence

Transcript ID

Zm00001d033366_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:260525308:260531288:-1 gene:Zm00001d033366 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGGCGAAGAATCGCACCGCGGGAGACCGAGACAGGCAGCCAGCGCGGGGCAGCTGAAGC
CTATCTTGTAGGAGTATCTTCTATCACCACCTCGGTACCCCGAGGGAAAGAAGAAGCGGA
GGGGAGGCAGGAATCGCCTGCCCGCGCCTCCATCGCCCTGCCGGCGACGGCCCACATGCC
GACCGCCTACAGCCTCCGCGCGCCGCCCTCCGCCTCGCAGCAGCGCCTCAGGCTGCCCCT
ACCGCCGCCCCCGCCGCCGCTGCCGTTTTGCCCGGGTGGAGGGGCCGCCCGCCGGAGGAG
GGGTGTCGGGGTGGCGTCTGCGTCCGCGTCGCCCTTCGACGAGCTGCACGCGCGGGGGAG
GCCCGTACATGGACCCTCCAAGAAATCCATGCTCTGGAACTTGATCCAGGATATAGAGCC
CTTGGACCTAAGTGTCATCCAGAAAGATGTTGCTCCTGAAACAGTAGATGCAATGAAGAG
GACTATTTCTGGCATGTTGGGTCTTCTTCCATCTGATCAGTTCCGTGTCATTGTAGAAGC
CCTTTGGAATCCCTTCTTCAAGTTATTGGTATCTTCAATTATGACTGGGTATACTCTGCG
AAATGCTGAATACAGGCTTTCTTTTGAAAGAAATCTAGAACTGCCTGAAGAAGGTGTAGA
ATGCCTAAAAAGTGATGTCACTGAAGATAATCATCATAACATCAATTTGGGAAGACCTGT
CACTATTTTTAGATTATCCGAAGAAGACATGCCTCAGGACCCTGGAAAAACCGATGAAGC
ATCATCTTATGAAAATATGGGAGAAGAGCTTGGTGACTTAACACCACAGGCAGAGGAGTA
TATTATTCAGATGCAATCTCATTTGAATGCCATGAAAAAGGAGTTACATGATCTCAGGAG
AAAGAATTCTGCCTTACAGATGCAGCAGTTTGTTGGGGAGGAAAAAAACGACTTGCTGGA
CTATTTGAGGTCATTAACACCAGAGAAGGTTGCTGAACTATCAGAATCGACGTCTCCCGG
TGTGCAAGAAACTATTCATTCTGTGGTTCATGGTTTGCTTGCTACTCTTTCCCCCAAGGT
ACATTCAAAGGCCCCTCCACCGCTAGATAACATTTCTGGTGGTGTTCTAAACCTTGGGGG
CGAGGATGATGATCGTGCAGAACTTGTGGAGAATGCTTCCCTCCCATTTCAGCCCCTAAT
ATCTGTTCCCCGTGATTATCTTGCACGTTTGCTGTTCTGGTGCATGCTGCTGGGTCACTA
CATTCGGGGTCTGGAGTACCGGTTAGAGCTTGCTCGGCTTCTGCGAATATCCAGCGTGGG
TTCTTTCTCTGGTGGAGATGATCATGTTGTTTGAGGGTACCACGTCTACTGATATTCCTC
ACCGGGAAGAATGGAAAGATGGCAGAGCTGCAGAGGTGTCCGTTACACTGC