Gene sequences

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SNP Detection
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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033344_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:1:259651567:259655654:1 gene:Zm00001d033344 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ domain-containing protein NPY2
Sequence	ATGAAGTATATGAAGCTTGGATCAAAGCCGGATGTCCTTCAGACGGAGGGGAGCAATATC AGGTTTTTTTATGTACAAAGGGAAAATAATCGCATACCCTGCAAAATTCTTTTTCAGTTC CCTCTTCTATCAAAGAGTTCACGCCTGCAAAGATTAGTTGCTTCAATCAATGAGGAGAAA AATGACGAAGTGGATATCTCTGACATCCCTGGTGGGCCTTCAGCATTTGAAATATGTGCT AAGTTCTGCTATGGCATGATTGTGACACTCAATGCGTATAATGTCCTCGCCGCCCGGTGC GCAGCCGAGTACCTAGAGATGTTCGAGACCATTGACAAAGGAAACCTCATATACAAGATC GATGTGTTTCTGACATCAAGTGTGTTCCGCACCTGGAAGGACTCGATCATAGTTCTACAG AGCACAAGGTCACTGGTACCTTGGTGTGAGGATTTGAAAGTGATCAGCCACTGCATCGAC TCTATCGCGTCGAAGGCGTCGATTGATCCATCAGAGGTTGAGTGGTCATACACTTACAAC AGAAAGAAACTCCCGTCTGAGAACGGTATCGATTCGCATTGGAATGGTGTCAGGATGCAA CCTATGGTCCCTACTGACTGGTGGGTAGAGGACCTCTGTGAGCTTGAAGTGGACTCGTAC AAGCGGGTGATCATGAGCATCAAGGCAAAGGGAAGCACGCCAGCTGTTGTCGTCGGAGAA GCATTGAGGGCCTACGCGTACCGACGGCTGCTTGGCTCCCTGGAAGACGCTGTGAGCAAT GGAGTTGATTGCGCAAAGCCTCGTGCAGTTCTTGACGCTATTGTATCTCTCTTGCCCGCT GAGGAAGGCTCGGTGTCATGTGGTTTTCTTCTTAAGCTGCTGGGAGCTGCATGTTTGCTG GAATCTGGTGAGTCGTCCCATCGCAGTAACTTGATCAAGAGAATAGGCGCACAGTTGGAC GGTGCTTCAGTTTCAGACCTTCTCATTATACCACCAAATACTGATGAAAACGATACATAC AGCATAGATCTGGTCATGGCAATAGTGGAGGAATTCATGTCGTTACAGAATAGCGACAGT GGCAAGGAGAAATTTCAAGATGATGAAGAGATCGTGGAGACTGAGAACGTGGCATCGGTT TCCAGCACGTCAAAGCTGGCAGTTGCAAAGCTGATCGATGGATATCTTGCTGAGGTTGCC AAGGATCCCAACCTTCCTCTTCCGAAGCTGACCGCGCTTGCTGAAATGGTGTCTTCCCTA CCCCGGCCAACGCATGACGGCCTCTACCGTGCCATTGACATGTATCTGAAGGAGCACCCC AGCCTGTCGAAGAGCGAGAAGAAGAAACTATGCGGGCTGATGGACTGCAAGCAGCTGTCG CACGATGCGTGCATGCACGCCGTGCAGAACGAGCGTCTCCCCTTGCGTGTGGTCGTGCAG GTTCTCTTCTTCGAGCAGGTCCGGGCGTCTGTCGCCTCTGCGAGGAGTGACCCTTCTTCA GCTGAGCTTCCATCTGCCGTTCGCTCGCTTCTTCCCAGAGAGAACGGTAACTCTGTTGGC AGCTCCAGGTCAGCTGCCACGACGACAACGGAGGAGGACGGATGTGGGGTCCCGACGTCG AGTGACGTCAACTCGTTGAGGTCAACAAGGCTCGCCAACAACAGCGGCGGAAGCGAGAGG AGCAGTGGCAGCAGCGACATCAACAGGAGCGCCGCGGGGAGGGGGGCAAGGGGGATTCTG ATGCCGAAGAAGATGCTGAGCAAGCTCTGGTCTGGGAAAACGAACGCCGGTGAGAACAGC AGCTCAGACACGTCGCAGAGCCCTGGGTCCGTCAACAACCCGGAGGAGGTGAAGTCCACG CAGTCAAGGATCACAAGGCGCTCGGTATCCTAG

Peptide Sequence

PEP ID	Zm00001d033344_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:1:259651567:259655654:1 gene:Zm00001d033344 transcript:Zm00001d033344_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ domain-containing protein NPY2
Sequence	MKYMKLGSKPDVLQTEGSNIRFFYVQRENNRIPCKILFQFPLLSKSSRLQRLVASINEEK NDEVDISDIPGGPSAFEICAKFCYGMIVTLNAYNVLAARCAAEYLEMFETIDKGNLIYKI DVFLTSSVFRTWKDSIIVLQSTRSLVPWCEDLKVISHCIDSIASKASIDPSEVEWSYTYN RKKLPSENGIDSHWNGVRMQPMVPTDWWVEDLCELEVDSYKRVIMSIKAKGSTPAVVVGE ALRAYAYRRLLGSLEDAVSNGVDCAKPRAVLDAIVSLLPAEEGSVSCGFLLKLLGAACLL ESGESSHRSNLIKRIGAQLDGASVSDLLIIPPNTDENDTYSIDLVMAIVEEFMSLQNSDS GKEKFQDDEEIVETENVASVSSTSKLAVAKLIDGYLAEVAKDPNLPLPKLTALAEMVSSL PRPTHDGLYRAIDMYLKEHPSLSKSEKKKLCGLMDCKQLSHDACMHAVQNERLPLRVVVQ VLFFEQVRASVASARSDPSSAELPSAVRSLLPRENGNSVGSSRSAATTTTEEDGCGVPTS SDVNSLRSTRLANNSGGSERSSGSSDINRSAAGRGARGILMPKKMLSKLWSGKTNAGENS SSDTSQSPGSVNNPEEVKSTQSRITRRSVS

Transcript Sequence

Transcript ID	Zm00001d033344_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:259651567:259655654:1 gene:Zm00001d033344 gene_biotype:protein_coding transcript_biotype:protein_coding description:BTB/POZ domain-containing protein NPY2
Sequence	GGTGCGGTTGCCCGAGTAGTTTACTCGTCTAGAGGAGGGGTTTGGTTCTCGACCCGATTC GGTGGGGGCTTCGCCACTGGGATAGGGGGACAGTTTGGCCTGCTGGATCTTTATCGCCAG TTGTTGGTTCTGTCCTTTCCATTGGGCTGGTACTTTCTTGACGGATTGGTTAAGCGCTGT CTGTGGGGTTGTTGTGCTGCTCCTCCCTTCATCTCGTTTTGTGGTGATTGGTGGGGGGAG GAGGAAGAGCTAGGAGGATTCTCTCTCTTGTTCTTGGGTCAGTTCTTGGCACGGCAGGAT GAAGTATATGAAGCTTGGATCAAAGCCGGATGTCCTTCAGACGGAGGGGAGCAATATCAG GTTTTTTTATGTACAAAGGGAAAATAATCGCATACCCTGCAAAATTCTTTTTCAGTTCCC TCTTCTATCAAAGAGTTCACGCCTGCAAAGATTAGTTGCTTCAATCAATGAGGAGAAAAA TGACGAAGTGGATATCTCTGACATCCCTGGTGGGCCTTCAGCATTTGAAATATGTGCTAA GTTCTGCTATGGCATGATTGTGACACTCAATGCGTATAATGTCCTCGCCGCCCGGTGCGC AGCCGAGTACCTAGAGATGTTCGAGACCATTGACAAAGGAAACCTCATATACAAGATCGA TGTGTTTCTGACATCAAGTGTGTTCCGCACCTGGAAGGACTCGATCATAGTTCTACAGAG CACAAGGTCACTGGTACCTTGGTGTGAGGATTTGAAAGTGATCAGCCACTGCATCGACTC TATCGCGTCGAAGGCGTCGATTGATCCATCAGAGGTTGAGTGGTCATACACTTACAACAG AAAGAAACTCCCGTCTGAGAACGGTATCGATTCGCATTGGAATGGTGTCAGGATGCAACC TATGGTCCCTACTGACTGGTGGGTAGAGGACCTCTGTGAGCTTGAAGTGGACTCGTACAA GCGGGTGATCATGAGCATCAAGGCAAAGGGAAGCACGCCAGCTGTTGTCGTCGGAGAAGC ATTGAGGGCCTACGCGTACCGACGGCTGCTTGGCTCCCTGGAAGACGCTGTGAGCAATGG AGTTGATTGCGCAAAGCCTCGTGCAGTTCTTGACGCTATTGTATCTCTCTTGCCCGCTGA GGAAGGCTCGGTGTCATGTGGTTTTCTTCTTAAGCTGCTGGGAGCTGCATGTTTGCTGGA ATCTGGTGAGTCGTCCCATCGCAGTAACTTGATCAAGAGAATAGGCGCACAGTTGGACGG TGCTTCAGTTTCAGACCTTCTCATTATACCACCAAATACTGATGAAAACGATACATACAG CATAGATCTGGTCATGGCAATAGTGGAGGAATTCATGTCGTTACAGAATAGCGACAGTGG CAAGGAGAAATTTCAAGATGATGAAGAGATCGTGGAGACTGAGAACGTGGCATCGGTTTC CAGCACGTCAAAGCTGGCAGTTGCAAAGCTGATCGATGGATATCTTGCTGAGGTTGCCAA GGATCCCAACCTTCCTCTTCCGAAGCTGACCGCGCTTGCTGAAATGGTGTCTTCCCTACC CCGGCCAACGCATGACGGCCTCTACCGTGCCATTGACATGTATCTGAAGGAGCACCCCAG CCTGTCGAAGAGCGAGAAGAAGAAACTATGCGGGCTGATGGACTGCAAGCAGCTGTCGCA CGATGCGTGCATGCACGCCGTGCAGAACGAGCGTCTCCCCTTGCGTGTGGTCGTGCAGGT TCTCTTCTTCGAGCAGGTCCGGGCGTCTGTCGCCTCTGCGAGGAGTGACCCTTCTTCAGC TGAGCTTCCATCTGCCGTTCGCTCGCTTCTTCCCAGAGAGAACGGTAACTCTGTTGGCAG CTCCAGGTCAGCTGCCACGACGACAACGGAGGAGGACGGATGTGGGGTCCCGACGTCGAG TGACGTCAACTCGTTGAGGTCAACAAGGCTCGCCAACAACAGCGGCGGAAGCGAGAGGAG CAGTGGCAGCAGCGACATCAACAGGAGCGCCGCGGGGAGGGGGGCAAGGGGGATTCTGAT GCCGAAGAAGATGCTGAGCAAGCTCTGGTCTGGGAAAACGAACGCCGGTGAGAACAGCAG CTCAGACACGTCGCAGAGCCCTGGGTCCGTCAACAACCCGGAGGAGGTGAAGTCCACGCA GTCAAGGATCACAAGGCGCTCGGTATCCTAGTCGCGGAGGGGTAACCGCGGTCACAGCCT AGTTTTGTTCTTGCTCTTGATTTTTGCCTTCACTGGAGAGTAGTGGCAATCTAAAAAATG TGGAGTTACTGGAGTAGGTTTGGTCATTGATGATGTTTTCAGCCATGTTCCATGGGAACT TTTTACATACAAAGAAAGTATAGGTTGTTATAATTGATGTATTTTTGCTGGCAAAATCAT AGTGTTTTAGTTTGCTTTTT