Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d033333_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:1:259324966:259330535:1 gene:Zm00001d033333 gene_biotype:protein_coding transcript_biotype:protein_coding description:ARM repeat superfamily protein
Sequence	ATGCCGCCCGCGCGCCGCCGCCCCCGCCGTGGCGGGACTCCCGCTGGCGCCGGGGACGAC TCCGTCCCCTCCTCCTCCGCCGACCTCCTCGCGCTTGCCGCCACGCTCATCCCGGCCGCC GCCACCGCCGCACTCAAAGCCCCGCCCCAACTCAAGCAACTCGTGCACTCGCTCCCCGTC TCCCACCCGCTCCTCATCTCTCTCCCGCAAGCGCTCACCCTAGCCCTCGCTACCCCCTCC GACCCCGACGCCGGCTCCACTTCCGACGCACCCCCGCCCCCACCCCCTCCTCCACGCCCC GCCGCCGTCCTCCTCCACCTGCTCGTCACACACCCCACCCACCCGCCTAGATGGGAAGAC CTCGTCTGCCCGCTCGCGCTGCTCCACGGTCGCCTCGCGCTCCTCGCCACCGCCGACCCA CCGCTCGCAGCCCTTGCCGCCGCGTGCTTCGAGCTCGCCTGGCGCGCCGACGCGCCTGGA CGCGAAGCCCTAGTTGCGCAGACGCTGCCCTACCTCGTGGCCCTGGCGCTCACCTCCGGC ACCAGCGCCAGGCCGATCCTCCGCCGCCTCTTCGCGCTCCGCGACGCGCTGCCGCTGCTC GACTACGACGACGACCAGAGCATTTCTGATTTCAAGATGCTCCTGCTTCGCTGCTTCGTC TCGCCGCTCTTCCTCAAGGCCGAGGAAGGGAGGAAGTTCCTCGCACTCGTGCTCGGGGTC AGCGAGGGGATCGCCAGGGATGGGCTGGAGCTCATCAGGGCGCAGGTGGGGATGACCGGG GCCAAGCGCGCCGCGGTTGTAGCCTACGGGGAGGTCGTCTTCAGGGCATGGAAGGACGGG GGTTGGGTCAAGGGGGAGGTCGGGGAGGCGTTCCTGCAGGGGATGGTGGAGGGCGCCGTA CACGCAGGGAGCAAGGAGGTGGCCAAGGCGGCCAGGAAGATCCTGTCGCCTTTCGTGGAG CAGAGGGCGGTTGCTGGGGTTGAAAAGTTGGTGTTCCAGCTTGCCGAACCTGTGTTGTTC CGTTCGTTGCAGGTTGCAAACTCCAATGTTCGCCATAATGCTTTGCATCTTCTGTTAGAT TTGTTTCCCCTCGAAGATCCAGATGTGACTAAGGATGTTAATGATCCTCTCCTAGAGAAG CAGTTCTTCTTGATAGACAGGCTCCTCATGGATGAATACCCAGAAATAAGAACAGTTGCA GTTGAAGGAATCTCTCGTATTCTTAACCAATACTGGGAAATTGTCCCTGCCCCCACTATT TCAAAATTTCTGAGTAAAATTGTTGATGACATGTCCAAGGATTCTTGCAATGAGGTTCGG CTATCAACACTTAATGGTCTCATATACTTGCTTGGCAATCCACAAAGTCACGAAATACTG AAAGTTTTACTTCCAAGATTAAGCGATATGATCTCAGATACTGCTCTGTCTATCAGGGCT GCTGCTGTTGATCTTCTTTTAGCTATTCGAGATCTTCGATCATTCCAATACAATAAGGTT GTTGGTCTGGGTACTTTATTGTCTTCACTTGCTAATGATCATCCCCGCATTGCTCAAAAA ATTACAAAGCTCCTCATTCCTTCTTATTTTCCATCAAAGTTGAGCCCAAAAGAAGCATGT GCTCGCTGCATTGCTCTAATCAAGAGGTCACCAACAGCTGGAGCAAGATTTTGTGAATTT GCTCTGTCTGAAGGGTCATCCCCAAGGTCCATTGTTGAGCTAGTCAAATATTCAATTACT CTCGCATTATCACAAACAGGACTTAACTCAGATCAAATTGATGGCCTAATTATTGCTTCA GTCAATCTTATTAAAAGCTTATCCAATGAGCGCTCTAGTTTGGCTGCTTTGCGAGAATTT TTGGCAAATGGGAAGCTAAGGTTGGTCCTTCAAGTTGCTGTTTCTGAGCGTGCCCGGGCT GCCCTTCTTGGCATAGTTCCAGTTGTTTTACCTGATGAACTATCTGTGCTTCATGAGGAA TGCATGGATATAGTTGTGAATGCAGCTAGGATTTCAAAGCAAGAAGAATATCAGGAAACG GTGCTGGAAGCACATAAGTTGATAGTTTTGGGTGGCTGGTCTGATGAACTGTTTGAAGCA TTGACCAATACTCTGCAATCTAAAGCCTCTGATTTTGCTGAGATTTATGGAGTTGAACCT CCTCCATGTCCCGTTGCATCTTCAAGGAGGAAGAAAGGCAAGTCACTTAAGAAAATACCT GTACGTGACAATGTTGTTGGAAAGGGGTCATCCAAATCAAAAATCAGTAATGAAGAGCTT GCTGTTGCAGCGGGGGCAGCATGGCAGGTCAATGAAATAGTAAAAACTAAAGACTTGAGA GATGCTTTTCTTCAATCCTCTTATTCAGAGATTGTGTTTTCCTCCCTGAAGATCATTTCT CAAGTGTACATCGAGCAGTGCCTATATTTGGACTCTTTAGACCTTGCACCTGTATTGGCC TATTTGAGTTTGGCTACATGTAATGACCTTCCAGATGTCAATCAAACTGGAAGCTGCTTT GAGTCGTCAACGGCAAATCAGTCACTGGATCATCTGCTCAATTGTTTCGACAAACTTCTA AATGGAACTGTTAGCAATCCACCATCGAAATTGAACAAGAATGGAAAAGCTTTACGATCA AAAGACCAGCAGAAAGGAGCATCTGAAGCGAAAGGCACATTTAATGTGATTATGCTGGGT GCTTCAATTCTGAAGTTTATCATTGACACAAATATGAAGCCACTCAATGATGACAAAATA AGGTGCCTCAAATTTGCATCATCCTACATAAAATATGCAGTATCATCCATAAAAAAGCAT CAGGAACAGAGTTCATGTTTCAAGGGGGGTGATCTGAAGGACGCTTTGTTGCTTGTACGG AGCTCCTTTACATACGCTTCGAAGCTACTTCAATTGGTTTTATCAAGCTCCCCTGAGGAG TCATGCCCTCCAGAGGAGGCCTTCTTCCTTGCAAATGATCTTCTTGATATTGTGCCCGCT GTCGAGTCCTTTGCTGGCTCAAGATTTGCACCCAGCATAGTTTCTGCTCTGAAGCAATGG CTGCCTGTGCTCTTGTTGGGTCTTGTATGCCGGTGGCTAATTGGATCACATAATGAAATG GCACCCAACGTATTCCACTTTGCTGACTCTGTCTTACCACTGTGGGTCACTGCCGTGGCA AAGAATGAGCTTGTTGATTCCAAAGAGCCTGGCCAGGACGAGCAAAGCAATCTGACTGCG GAGGGCGAGGACTCACTGTTATCCAGAAAGCTAGCAGAAATGATGGCGATCCTCTTGAAG AAAGGAAGCCCCAGAATCCTCGATTGCGCGAGTGGAGTCCTTCTGTCCACTTTCCAGTTG ACGCTGCGAAGATCAGACTATGACATTGTCCTGGGCATGACTCGTTTCATTTGTGACAAG TTGCTTGGGAACAACTCCCTAGCATTGGAAAAGCTGCAGCTTACCCGTGACTTTCTTCGT GAGAATTTCCTCGAGATTGATAGGTATGTCCGCGATGAGCTTGTCCATGATGACGATTCG AGGCAGCAACTGGAGAAAGCAAAAGCGCTGATAAGATCAGTTCTCACCGATGTCTGA

Peptide Sequence

PEP ID	Zm00001d033333_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:1:259324966:259330535:1 gene:Zm00001d033333 transcript:Zm00001d033333_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:ARM repeat superfamily protein
Sequence	MPPARRRPRRGGTPAGAGDDSVPSSSADLLALAATLIPAAATAALKAPPQLKQLVHSLPV SHPLLISLPQALTLALATPSDPDAGSTSDAPPPPPPPPRPAAVLLHLLVTHPTHPPRWED LVCPLALLHGRLALLATADPPLAALAAACFELAWRADAPGREALVAQTLPYLVALALTSG TSARPILRRLFALRDALPLLDYDDDQSISDFKMLLLRCFVSPLFLKAEEGRKFLALVLGV SEGIARDGLELIRAQVGMTGAKRAAVVAYGEVVFRAWKDGGWVKGEVGEAFLQGMVEGAV HAGSKEVAKAARKILSPFVEQRAVAGVEKLVFQLAEPVLFRSLQVANSNVRHNALHLLLD LFPLEDPDVTKDVNDPLLEKQFFLIDRLLMDEYPEIRTVAVEGISRILNQYWEIVPAPTI SKFLSKIVDDMSKDSCNEVRLSTLNGLIYLLGNPQSHEILKVLLPRLSDMISDTALSIRA AAVDLLLAIRDLRSFQYNKVVGLGTLLSSLANDHPRIAQKITKLLIPSYFPSKLSPKEAC ARCIALIKRSPTAGARFCEFALSEGSSPRSIVELVKYSITLALSQTGLNSDQIDGLIIAS VNLIKSLSNERSSLAALREFLANGKLRLVLQVAVSERARAALLGIVPVVLPDELSVLHEE CMDIVVNAARISKQEEYQETVLEAHKLIVLGGWSDELFEALTNTLQSKASDFAEIYGVEP PPCPVASSRRKKGKSLKKIPVRDNVVGKGSSKSKISNEELAVAAGAAWQVNEIVKTKDLR DAFLQSSYSEIVFSSLKIISQVYIEQCLYLDSLDLAPVLAYLSLATCNDLPDVNQTGSCF ESSTANQSLDHLLNCFDKLLNGTVSNPPSKLNKNGKALRSKDQQKGASEAKGTFNVIMLG ASILKFIIDTNMKPLNDDKIRCLKFASSYIKYAVSSIKKHQEQSSCFKGGDLKDALLLVR SSFTYASKLLQLVLSSSPEESCPPEEAFFLANDLLDIVPAVESFAGSRFAPSIVSALKQW LPVLLLGLVCRWLIGSHNEMAPNVFHFADSVLPLWVTAVAKNELVDSKEPGQDEQSNLTA EGEDSLLSRKLAEMMAILLKKGSPRILDCASGVLLSTFQLTLRRSDYDIVLGMTRFICDK LLGNNSLALEKLQLTRDFLRENFLEIDRYVRDELVHDDDSRQQLEKAKALIRSVLTDV

Transcript Sequence

Transcript ID	Zm00001d033333_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:1:259324966:259330535:1 gene:Zm00001d033333 gene_biotype:protein_coding transcript_biotype:protein_coding description:ARM repeat superfamily protein
Sequence	GTCTCACTCTCACACTATCGCCCCTTGAAAAATTCCCCGTCGATCCCGCGCACCATTTCG AAACCCCGCCCCCAAATCCCCGACGTCCCCGCCCAATGCCGCCCGCGCGCCGCCGCCCCC GCCGTGGCGGGACTCCCGCTGGCGCCGGGGACGACTCCGTCCCCTCCTCCTCCGCCGACC TCCTCGCGCTTGCCGCCACGCTCATCCCGGCCGCCGCCACCGCCGCACTCAAAGCCCCGC CCCAACTCAAGCAACTCGTGCACTCGCTCCCCGTCTCCCACCCGCTCCTCATCTCTCTCC CGCAAGCGCTCACCCTAGCCCTCGCTACCCCCTCCGACCCCGACGCCGGCTCCACTTCCG ACGCACCCCCGCCCCCACCCCCTCCTCCACGCCCCGCCGCCGTCCTCCTCCACCTGCTCG TCACACACCCCACCCACCCGCCTAGATGGGAAGACCTCGTCTGCCCGCTCGCGCTGCTCC ACGGTCGCCTCGCGCTCCTCGCCACCGCCGACCCACCGCTCGCAGCCCTTGCCGCCGCGT GCTTCGAGCTCGCCTGGCGCGCCGACGCGCCTGGACGCGAAGCCCTAGTTGCGCAGACGC TGCCCTACCTCGTGGCCCTGGCGCTCACCTCCGGCACCAGCGCCAGGCCGATCCTCCGCC GCCTCTTCGCGCTCCGCGACGCGCTGCCGCTGCTCGACTACGACGACGACCAGAGCATTT CTGATTTCAAGATGCTCCTGCTTCGCTGCTTCGTCTCGCCGCTCTTCCTCAAGGCCGAGG AAGGGAGGAAGTTCCTCGCACTCGTGCTCGGGGTCAGCGAGGGGATCGCCAGGGATGGGC TGGAGCTCATCAGGGCGCAGGTGGGGATGACCGGGGCCAAGCGCGCCGCGGTTGTAGCCT ACGGGGAGGTCGTCTTCAGGGCATGGAAGGACGGGGGTTGGGTCAAGGGGGAGGTCGGGG AGGCGTTCCTGCAGGGGATGGTGGAGGGCGCCGTACACGCAGGGAGCAAGGAGGTGGCCA AGGCGGCCAGGAAGATCCTGTCGCCTTTCGTGGAGCAGAGGGCGGTTGCTGGGGTTGAAA AGTTGGTGTTCCAGCTTGCCGAACCTGTGTTGTTCCGTTCGTTGCAGGTTGCAAACTCCA ATGTTCGCCATAATGCTTTGCATCTTCTGTTAGATTTGTTTCCCCTCGAAGATCCAGATG TGACTAAGGATGTTAATGATCCTCTCCTAGAGAAGCAGTTCTTCTTGATAGACAGGCTCC TCATGGATGAATACCCAGAAATAAGAACAGTTGCAGTTGAAGGAATCTCTCGTATTCTTA ACCAATACTGGGAAATTGTCCCTGCCCCCACTATTTCAAAATTTCTGAGTAAAATTGTTG ATGACATGTCCAAGGATTCTTGCAATGAGGTTCGGCTATCAACACTTAATGGTCTCATAT ACTTGCTTGGCAATCCACAAAGTCACGAAATACTGAAAGTTTTACTTCCAAGATTAAGCG ATATGATCTCAGATACTGCTCTGTCTATCAGGGCTGCTGCTGTTGATCTTCTTTTAGCTA TTCGAGATCTTCGATCATTCCAATACAATAAGGTTGTTGGTCTGGGTACTTTATTGTCTT CACTTGCTAATGATCATCCCCGCATTGCTCAAAAAATTACAAAGCTCCTCATTCCTTCTT ATTTTCCATCAAAGTTGAGCCCAAAAGAAGCATGTGCTCGCTGCATTGCTCTAATCAAGA GGTCACCAACAGCTGGAGCAAGATTTTGTGAATTTGCTCTGTCTGAAGGGTCATCCCCAA GGTCCATTGTTGAGCTAGTCAAATATTCAATTACTCTCGCATTATCACAAACAGGACTTA ACTCAGATCAAATTGATGGCCTAATTATTGCTTCAGTCAATCTTATTAAAAGCTTATCCA ATGAGCGCTCTAGTTTGGCTGCTTTGCGAGAATTTTTGGCAAATGGGAAGCTAAGGTTGG TCCTTCAAGTTGCTGTTTCTGAGCGTGCCCGGGCTGCCCTTCTTGGCATAGTTCCAGTTG TTTTACCTGATGAACTATCTGTGCTTCATGAGGAATGCATGGATATAGTTGTGAATGCAG CTAGGATTTCAAAGCAAGAAGAATATCAGGAAACGGTGCTGGAAGCACATAAGTTGATAG TTTTGGGTGGCTGGTCTGATGAACTGTTTGAAGCATTGACCAATACTCTGCAATCTAAAG CCTCTGATTTTGCTGAGATTTATGGAGTTGAACCTCCTCCATGTCCCGTTGCATCTTCAA GGAGGAAGAAAGGCAAGTCACTTAAGAAAATACCTGTACGTGACAATGTTGTTGGAAAGG GGTCATCCAAATCAAAAATCAGTAATGAAGAGCTTGCTGTTGCAGCGGGGGCAGCATGGC AGGTCAATGAAATAGTAAAAACTAAAGACTTGAGAGATGCTTTTCTTCAATCCTCTTATT CAGAGATTGTGTTTTCCTCCCTGAAGATCATTTCTCAAGTGTACATCGAGCAGTGCCTAT ATTTGGACTCTTTAGACCTTGCACCTGTATTGGCCTATTTGAGTTTGGCTACATGTAATG ACCTTCCAGATGTCAATCAAACTGGAAGCTGCTTTGAGTCGTCAACGGCAAATCAGTCAC TGGATCATCTGCTCAATTGTTTCGACAAACTTCTAAATGGAACTGTTAGCAATCCACCAT CGAAATTGAACAAGAATGGAAAAGCTTTACGATCAAAAGACCAGCAGAAAGGAGCATCTG AAGCGAAAGGCACATTTAATGTGATTATGCTGGGTGCTTCAATTCTGAAGTTTATCATTG ACACAAATATGAAGCCACTCAATGATGACAAAATAAGGTGCCTCAAATTTGCATCATCCT ACATAAAATATGCAGTATCATCCATAAAAAAGCATCAGGAACAGAGTTCATGTTTCAAGG GGGGTGATCTGAAGGACGCTTTGTTGCTTGTACGGAGCTCCTTTACATACGCTTCGAAGC TACTTCAATTGGTTTTATCAAGCTCCCCTGAGGAGTCATGCCCTCCAGAGGAGGCCTTCT TCCTTGCAAATGATCTTCTTGATATTGTGCCCGCTGTCGAGTCCTTTGCTGGCTCAAGAT TTGCACCCAGCATAGTTTCTGCTCTGAAGCAATGGCTGCCTGTGCTCTTGTTGGGTCTTG TATGCCGGTGGCTAATTGGATCACATAATGAAATGGCACCCAACGTATTCCACTTTGCTG ACTCTGTCTTACCACTGTGGGTCACTGCCGTGGCAAAGAATGAGCTTGTTGATTCCAAAG AGCCTGGCCAGGACGAGCAAAGCAATCTGACTGCGGAGGGCGAGGACTCACTGTTATCCA GAAAGCTAGCAGAAATGATGGCGATCCTCTTGAAGAAAGGAAGCCCCAGAATCCTCGATT GCGCGAGTGGAGTCCTTCTGTCCACTTTCCAGTTGACGCTGCGAAGATCAGACTATGACA TTGTCCTGGGCATGACTCGTTTCATTTGTGACAAGTTGCTTGGGAACAACTCCCTAGCAT TGGAAAAGCTGCAGCTTACCCGTGACTTTCTTCGTGAGAATTTCCTCGAGATTGATAGGT ATGTCCGCGATGAGCTTGTCCATGATGACGATTCGAGGCAGCAACTGGAGAAAGCAAAAG CGCTGATAAGATCAGTTCTCACCGATGTCTGATTGATGTACATACCAGTTGTAAGCAACA AACCGATAAGTTTCCACCGGTGTCTGGAGAAAGCAAAAGCGCTGATAGTAGGGCTGATTA GTATCACGTTGTGTCATTGTTCAACAAAGGCACTGCAGTGACCATGTGTGATTGGATAGA AGATCATTTCCACTGACAAGTAGAGACCAGAAATGAACTGTTTGAATCAACAATCAAGCT AGAGTTATAACTGTGTTGCATTCAAATTTGCAGTCTACTTACAACTGACACAGGTACAAA CTGTGTAACAATCCCACGTTATTGTAATCCACCACATCCCATTTCATAATAGCAAATGGA CGCTGGTGTATACAAGCCACAAGGTACTATTTGTAAGGAAAAAATAAAACTAAATGGACG ACTCAATATACAGTTTAGTAATACGG