Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d033300_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:1:258063193:258065454:-1 gene:Zm00001d033300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G043191 description:Type IV inositol polyphosphate 5-phosphatase 11
Sequence

ATGGGCAACTGCAGCAGCAGCAGCGGCTTCTTCTCTCTTCCGAAACGGGGAAGCAAGCTA
CTCAAACTCAACAATGGCATGGTCTCGGTCGACGATGAGGGTGGGACTCACGAAGGGATA
AAGACCATTCCGGTGCAGAGAGCCTGCGAGTTCACCACGAACTCCGTGCTCTGCGTCTGC
ATCGTCACTTGGAACATGAACAGCAAGATGTCCGCGGAAGATGTGGCGAAGCTGGTGAGC
TCCGACAGGAAGTTCGATCTGCTGGTCGTCGGGCTGCAGGAGGCGCCGAAGCCAGACGTT
TCAAGGGTCCTGCAGGAGGCGTTGGCGGGGACACACGTGCTGTTGGGTCAGAAGAGCATG
CAGTCTCTCCGGATGCTTCTTTTCGGTTCAAGGAGCTCGGAGAAGTACATCAGAGAGATG
AAGGTGGACAAACACGCGGTTGGGGGTTGCGGGGGTATCATCGGGAGGAAGAAAGGAGCG
GTGGCCATGTACATCAACTTCAGCGGGATCCGGATGGTCTTCGTGTCCTGCCATCTTGCA
GCTCACGAGCACAAGGTGGAGAAGAGGAACGCGGAGTTCCAGCACATCTCGCAGTCGCTC
TTCGCCAGGTACGGCGCGCCGACGCCGTACGCGCAGTCTGCCGACATAACGGTGTGGCTG
GGCGACCTCAACTACAGGCTCCAAGGGATAAGCTCGACACCGGCGAGGAAGATGATCGAG
GAGAACCGCCAGAGCAAGCTAAGAGGCAGAGACCAGCTGCTGCAAGAGGCCGAGAAGGGC
CAGGTGTTCAGCGGCTACTGCGAGGGGACGCTGTCGTTTAAGCCCACGTACAAGTACGAC
GTCGGGGGCAGCGTCTACGACACCAGCTACAAGGTACGAGTGCCTTCGTGGACGGACAGG
ATACTGTTCAAGGTTGGCCAGTCTTCAGGCCTGGATGCAGTGCTGAGCTCGTACGAATCA
CTCGACTGTGTCCGGAGCTCCGACCACAAGCCTGTGAAGGCGCATCTCTGTCTCAAAGTA
CGCAGTGATGGTGATGCTGACTGA

Peptide Sequence

PEP ID

Zm00001d033300_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:1:258063193:258065454:-1 gene:Zm00001d033300 transcript:Zm00001d033300_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G043191 description:Type IV inositol polyphosphate 5-phosphatase 11
Sequence

MGNCSSSSGFFSLPKRGSKLLKLNNGMVSVDDEGGTHEGIKTIPVQRACEFTTNSVLCVC
IVTWNMNSKMSAEDVAKLVSSDRKFDLLVVGLQEAPKPDVSRVLQEALAGTHVLLGQKSM
QSLRMLLFGSRSSEKYIREMKVDKHAVGGCGGIIGRKKGAVAMYINFSGIRMVFVSCHLA
AHEHKVEKRNAEFQHISQSLFARYGAPTPYAQSADITVWLGDLNYRLQGISSTPARKMIE
ENRQSKLRGRDQLLQEAEKGQVFSGYCEGTLSFKPTYKYDVGGSVYDTSYKVRVPSWTDR
ILFKVGQSSGLDAVLSSYESLDCVRSSDHKPVKAHLCLKVRSDGDAD

Transcript Sequence

Transcript ID

Zm00001d033300_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:1:258063193:258065454:-1 gene:Zm00001d033300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRMZM2G043191 description:Type IV inositol polyphosphate 5-phosphatase 11
Sequence

CACGCTAGATCGATGATCAGGAACGTACAAAGGGTTCAGTTCAGTTTTCAGTGAGTCGGC
ATATGGGCAACTGCAGCAGCAGCAGCGGCTTCTTCTCTCTTCCGAAACGGGGAAGCAAGC
TACTCAAACTCAACAATGGCATGGTCTCGGTCGACGATGAGGGTGGGACTCACGAAGGGA
TAAAGACCATTCCGGTGCAGAGAGCCTGCGAGTTCACCACGAACTCCGTGCTCTGCGTCT
GCATCGTCACTTGGAACATGAACAGCAAGATGTCCGCGGAAGATGTGGCGAAGCTGGTGA
GCTCCGACAGGAAGTTCGATCTGCTGGTCGTCGGGCTGCAGGAGGCGCCGAAGCCAGACG
TTTCAAGGGTCCTGCAGGAGGCGTTGGCGGGGACACACGTGCTGTTGGGTCAGAAGAGCA
TGCAGTCTCTCCGGATGCTTCTTTTCGGTTCAAGGAGCTCGGAGAAGTACATCAGAGAGA
TGAAGGTGGACAAACACGCGGTTGGGGGTTGCGGGGGTATCATCGGGAGGAAGAAAGGAG
CGGTGGCCATGTACATCAACTTCAGCGGGATCCGGATGGTCTTCGTGTCCTGCCATCTTG
CAGCTCACGAGCACAAGGTGGAGAAGAGGAACGCGGAGTTCCAGCACATCTCGCAGTCGC
TCTTCGCCAGGTACGGCGCGCCGACGCCGTACGCGCAGTCTGCCGACATAACGGTGTGGC
TGGGCGACCTCAACTACAGGCTCCAAGGGATAAGCTCGACACCGGCGAGGAAGATGATCG
AGGAGAACCGCCAGAGCAAGCTAAGAGGCAGAGACCAGCTGCTGCAAGAGGCCGAGAAGG
GCCAGGTGTTCAGCGGCTACTGCGAGGGGACGCTGTCGTTTAAGCCCACGTACAAGTACG
ACGTCGGGGGCAGCGTCTACGACACCAGCTACAAGGTACGAGTGCCTTCGTGGACGGACA
GGATACTGTTCAAGGTTGGCCAGTCTTCAGGCCTGGATGCAGTGCTGAGCTCGTACGAAT
CACTCGACTGTGTCCGGAGCTCCGACCACAAGCCTGTGAAGGCGCATCTCTGTCTCAAAG
TACGCAGTGATGGTGATGCTGACTGATATCCAGTACTGGCGGTTACTTCTGCCGATTAAC
ATGACATGCTACGATGAAAATGTTCTAGTTTGGAATGGTGATTATACTCTAGTATATTTT
ATAACATGGCGCTCGATCTTAGCTTGTGGGCCAATTGTTTCAGAACGTGCCATTCTTTCT
TATTCTATTTTCTCCCCTTTTGTTTCTCCTTGTACAACTATGGCTATCTATACTACTTAT
TAAGGCTCTAAGGGTAGCCTGCCTTTTTTC